RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 DEFB1P60022 68 aa4.46□□□□□ -1.7
VCAN-203ENST00000343200 TM2D3Q9BRN9 247 aa4.46□□□□□ -1.7
VCAN-203ENST00000343200 IGKV2D-30A0A075B6S6 120 aa4.46□□□□□ -1.7
VCAN-203ENST00000343200 LINC00959A0A1B0GUT2 108 aa4.46□□□□□ -1.7
VCAN-203ENST00000343200 FSTL3O95633 263 aa4.46□□□□□ -1.7
VCAN-203ENST00000343200 IGKV2-30P06310 120 aa4.46□□□□□ -1.7
VCAN-203ENST00000343200 LELP1Q5T871 98 aa4.46□□□□□ -1.7
VCAN-203ENST00000343200 AMELXQ99217 191 aa4.46□□□□□ -1.7
VCAN-203ENST00000343200 CYSRT1A8MQ03 144 aa4.45□□□□□ -1.7
VCAN-203ENST00000343200 IGLV8-61A0A075B6I0 122 aa4.45□□□□□ -1.7
VCAN-203ENST00000343200 EGFEM1PQ0D2K5 195 aa4.45□□□□□ -1.7
VCAN-203ENST00000343200 SMAD5-AS1Q9Y6J3 95 aa4.45□□□□□ -1.7
VCAN-203ENST00000343200 LINC00337Q8N6G1 96 aa4.45□□□□□ -1.7
VCAN-203ENST00000343200 MAPK1IP1LQ8NDC0 245 aa4.45□□□□□ -1.7
VCAN-203ENST00000343200 COL4A2P08572 1712 aa4.45□□□□□ -1.7
VCAN-203ENST00000343200 IGLV1-47P01700 117 aa4.45□□□□□ -1.7
VCAN-203ENST00000343200 LINC00482Q8N8I6 264 aa4.44□□□□□ -1.7
VCAN-203ENST00000343200 LINC01600Q96MT4 127 aa4.44□□□□□ -1.7
VCAN-203ENST00000343200 MIR22HGQ0VDD5 57 aa4.44□□□□□ -1.7
VCAN-203ENST00000343200 A0A087WSZ3 146 aa4.44□□□□□ -1.7
VCAN-203ENST00000343200 LINC00242Q5T6M2 205 aa4.44□□□□□ -1.7
VCAN-203ENST00000343200 K7EQG2 157 aa4.44□□□□□ -1.7
VCAN-203ENST00000343200 TMEM105Q8N8V8 129 aa4.44□□□□□ -1.7
VCAN-203ENST00000343200 FLNCQ14315 2725 aa4.43□□□□□ -1.7
VCAN-203ENST00000343200 PRR3P79522 188 aaKnown RBP4.43□□□□□ -1.7
VCAN-203ENST00000343200 LINC01554Q52M75 96 aa4.43□□□□□ -1.7
VCAN-203ENST00000343200 COA5Q86WW8 74 aa4.43□□□□□ -1.7
VCAN-203ENST00000343200 EP400Q96L91 3159 aa4.43□□□□□ -1.7
VCAN-203ENST00000343200 C11orf72Q8NBR9 251 aa4.43□□□□□ -1.7
VCAN-203ENST00000343200 FAM215AQ9Y5M1 114 aa4.42□□□□□ -1.7
VCAN-203ENST00000343200 FSHBP01225 129 aa4.42□□□□□ -1.7
VCAN-203ENST00000343200 Q6ZQT0 140 aa4.42□□□□□ -1.7
VCAN-203ENST00000343200 Q6ZSV7 163 aa4.42□□□□□ -1.7
VCAN-203ENST00000343200 SRRM2Q9UQ35 2752 aaKnown RBP4.42□□□□□ -1.7
VCAN-203ENST00000343200 DEFB131BA0A096LNP1 70 aa4.42□□□□□ -1.7
VCAN-203ENST00000343200 COX6A2Q02221 97 aa4.42□□□□□ -1.7
VCAN-203ENST00000343200 ZFP36P26651 326 aaKnown RBP4.42□□□□□ -1.7
VCAN-203ENST00000343200 CDC42SE1Q9NRR8 79 aa4.42□□□□□ -1.7
VCAN-203ENST00000343200 ODF3BA8MYP8 253 aa4.41□□□□□ -1.7
VCAN-203ENST00000343200 A0A1B0GUV1 79 aa4.41□□□□□ -1.7
VCAN-203ENST00000343200 UTRNP46939 3433 aa4.41□□□□□ -1.7
VCAN-203ENST00000343200 GAS8-AS1O95177 125 aa4.41□□□□□ -1.7
VCAN-203ENST00000343200 MOBPQ13875 183 aa4.41□□□□□ -1.7
VCAN-203ENST00000343200 PSMG3-AS1Q96PY0 264 aa4.41□□□□□ -1.7
VCAN-203ENST00000343200 SPATA3Q8NHX4 192 aa4.41□□□□□ -1.7
VCAN-203ENST00000343200 RBM12B-AS1Q9P1G2 102 aa4.41□□□□□ -1.7
VCAN-203ENST00000343200 DEFB116Q30KQ4 102 aa4.4□□□□□ -1.7
VCAN-203ENST00000343200 SMCPP49901 116 aaPredicted RBP4.4□□□□□ -1.7
VCAN-203ENST00000343200 Q1T7F1 81 aa4.4□□□□□ -1.7
VCAN-203ENST00000343200 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.4□□□□□ -1.7
VCAN-203ENST00000343200 PROK1P58294 105 aa4.4□□□□□ -1.7
VCAN-203ENST00000343200 IGF2-ASQ6U949 168 aa4.4□□□□□ -1.71
VCAN-203ENST00000343200 A8MUN3 132 aa4.4□□□□□ -1.71
VCAN-203ENST00000343200 PIP4P1Q86T03 277 aa4.39□□□□□ -1.71
VCAN-203ENST00000343200 URB1-AS1Q96HZ7 61 aa4.39□□□□□ -1.71
VCAN-203ENST00000343200 DEFB114Q30KQ6 69 aa4.39□□□□□ -1.71
VCAN-203ENST00000343200 PRR9Q5T870 116 aa4.39□□□□□ -1.71
VCAN-203ENST00000343200 CHCHD7Q9BUK0 85 aa4.39□□□□□ -1.71
VCAN-203ENST00000343200 KALRNO60229 2985 aa4.39□□□□□ -1.71
VCAN-203ENST00000343200 IGLV2-18A0A075B6J9 118 aa4.39□□□□□ -1.71
VCAN-203ENST00000343200 LY6G6EA0A0G2JKS1 128 aa4.39□□□□□ -1.71
VCAN-203ENST00000343200 A8MTW9 85 aa4.39□□□□□ -1.71
VCAN-203ENST00000343200 CELSR2Q9HCU4 2923 aa4.39□□□□□ -1.71
VCAN-203ENST00000343200 H7BZZ5 65 aa4.39□□□□□ -1.71
VCAN-203ENST00000343200 UNQ6190/PRO20217Q6UXQ8 127 aa4.39□□□□□ -1.71
VCAN-203ENST00000343200 Q8N2B8 174 aa4.38□□□□□ -1.71
VCAN-203ENST00000343200 HIVEP1P15822 2718 aa4.38□□□□□ -1.71
VCAN-203ENST00000343200 DAZAP2Q15038 168 aaPredicted RBP4.38□□□□□ -1.71
VCAN-203ENST00000343200 COX8CQ7Z4L0 72 aa4.38□□□□□ -1.71
VCAN-203ENST00000343200 C2orf48Q96LS8 159 aa4.38□□□□□ -1.71
VCAN-203ENST00000343200 AVPP01185 164 aa4.38□□□□□ -1.71
VCAN-203ENST00000343200 TRIOO75962 3097 aa4.38□□□□□ -1.71
VCAN-203ENST00000343200 PDZD2O15018 2839 aa4.38□□□□□ -1.71
VCAN-203ENST00000343200 SMCR5Q8TEV8 140 aa4.38□□□□□ -1.71
VCAN-203ENST00000343200 C19orf84I3L1E1 186 aa4.37□□□□□ -1.71
VCAN-203ENST00000343200 BRWD1-AS2P59051 145 aa4.37□□□□□ -1.71
VCAN-203ENST00000343200 A0A096LNJ9 63 aa4.37□□□□□ -1.71
VCAN-203ENST00000343200 C5orf42Q9H799 3197 aa4.37□□□□□ -1.71
VCAN-203ENST00000343200 A0A0A0MQY5 61 aa4.37□□□□□ -1.71
VCAN-203ENST00000343200 Q8N7P7 452 aa4.37□□□□□ -1.71
VCAN-203ENST00000343200 NF1P21359 2839 aa4.37□□□□□ -1.71
VCAN-203ENST00000343200 NBEAQ8NFP9 2946 aa4.37□□□□□ -1.71
VCAN-203ENST00000343200 SPANXA2-OT1Q8N9U9 137 aa4.37□□□□□ -1.71
VCAN-203ENST00000343200 IGLV5-39A0A0G2JS06 123 aa4.37□□□□□ -1.71
VCAN-203ENST00000343200 BBC3Q96PG8 261 aaPredicted RBP4.36□□□□□ -1.71
VCAN-203ENST00000343200 Q6ZPA2 131 aa4.36□□□□□ -1.71
VCAN-203ENST00000343200 C11orf21Q9P2W6 132 aa4.35□□□□□ -1.71
VCAN-203ENST00000343200 GRNP28799 593 aaKnown RBP4.35□□□□□ -1.71
VCAN-203ENST00000343200 Q8NBF4 154 aa4.35□□□□□ -1.71
VCAN-203ENST00000343200 EPM2AB3EWF7 344 aa4.35□□□□□ -1.71
VCAN-203ENST00000343200 TRBV7-4A0A0J9YYF1 115 aa4.34□□□□□ -1.71
VCAN-203ENST00000343200 A8MWP4 228 aa4.34□□□□□ -1.71
VCAN-203ENST00000343200 FHL3Q13643 280 aa4.34□□□□□ -1.71
VCAN-203ENST00000343200 DEFB113Q30KQ7 82 aa4.34□□□□□ -1.71
VCAN-203ENST00000343200 LYPD5Q6UWN5 251 aa4.34□□□□□ -1.71
VCAN-203ENST00000343200 LINC01006Q8NI28 216 aa4.34□□□□□ -1.71
VCAN-203ENST00000343200 NIPBLQ6KC79 2804 aaeCLIP4.34□□□□□ -1.72
VCAN-203ENST00000343200 FAM218AQ96MZ4 157 aa4.34□□□□□ -1.72
VCAN-203ENST00000343200 ZNF580Q9UK33 172 aa4.34□□□□□ -1.72
VCAN-203ENST00000343200 KIAA0087Q14695 138 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms