RNA–Protein interactions for RNA: ENST00000342644.9

SNX21-201, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best) BASIC

Gene SNX21, Length 1,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-201ENST00000342644 H3BUT2 72 aa13.37□□□□□ -0.27
SNX21-201ENST00000342644 COX17Q14061 63 aa13.36□□□□□ -0.27
SNX21-201ENST00000342644 TLX1NBP0CAT3 122 aa13.35□□□□□ -0.27
SNX21-201ENST00000342644 CFC1BP0CG36 223 aa13.35□□□□□ -0.27
SNX21-201ENST00000342644 CFC1P0CG37 223 aa13.35□□□□□ -0.27
SNX21-201ENST00000342644 VAMP3Q15836 100 aa13.35□□□□□ -0.27
SNX21-201ENST00000342644 MIR7-3HGQ8N6C7 128 aa13.35□□□□□ -0.27
SNX21-201ENST00000342644 A0A1B0GVY2 172 aa13.34□□□□□ -0.27
SNX21-201ENST00000342644 PFN2P35080 140 aa13.34□□□□□ -0.27
SNX21-201ENST00000342644 KRTAP10-2P60368 255 aa13.34□□□□□ -0.27
SNX21-201ENST00000342644 PRO1854Q9UHT4 67 aa13.34□□□□□ -0.27
SNX21-201ENST00000342644 IGLV5-52A0A0A0MRZ9 124 aa13.34□□□□□ -0.27
SNX21-201ENST00000342644 C9orf116Q5BN46 136 aaPredicted RBP13.34□□□□□ -0.27
SNX21-201ENST00000342644 FABP2P12104 132 aa13.33□□□□□ -0.28
SNX21-201ENST00000342644 A0A1W2PPM0 123 aa13.32□□□□□ -0.28
SNX21-201ENST00000342644 LYRM7Q5U5X0 104 aa13.32□□□□□ -0.28
SNX21-201ENST00000342644 PKIGQ9Y2B9 76 aa13.32□□□□□ -0.28
SNX21-201ENST00000342644 NDUFC2-KCTD14E9PQ53 114 aa13.31□□□□□ -0.28
SNX21-201ENST00000342644 DNAH5Q8TE73 4624 aa13.3□□□□□ -0.28
SNX21-201ENST00000342644 LOC107984640A0A0U1RRK4 108 aa13.29□□□□□ -0.28
SNX21-201ENST00000342644 Q1RN00 199 aa13.29□□□□□ -0.28
SNX21-201ENST00000342644 NAA38Q9BRA0 125 aaKnown RBP13.29□□□□□ -0.28
SNX21-201ENST00000342644 TSPAN13O95857 204 aa13.29□□□□□ -0.28
SNX21-201ENST00000342644 SOSTDC1Q6X4U4 206 aa13.29□□□□□ -0.28
SNX21-201ENST00000342644 SDIM1Q6ZPB5 146 aa13.29□□□□□ -0.28
SNX21-201ENST00000342644 GTF2H5Q6ZYL4 71 aa13.29□□□□□ -0.28
SNX21-201ENST00000342644 FUSP35637 526 aaKnown RBP eCLIP13.28□□□□□ -0.28
SNX21-201ENST00000342644 Q6ZRP5 223 aa13.27□□□□□ -0.29
SNX21-201ENST00000342644 SND1-IT1Q9HBX3 110 aa13.27□□□□□ -0.29
SNX21-201ENST00000342644 SPCS1Q9Y6A9 102 aa13.26□□□□□ -0.29
SNX21-201ENST00000342644 GAGE10A6NGK3 116 aa13.24□□□□□ -0.29
SNX21-201ENST00000342644 C16orf90A8MZG2 172 aa13.24□□□□□ -0.29
SNX21-201ENST00000342644 K7EP34 96 aa13.24□□□□□ -0.29
SNX21-201ENST00000342644 LINC01620Q4KN68 170 aa13.24□□□□□ -0.29
SNX21-201ENST00000342644 EIF4EBP3O60516 100 aaPredicted RBP13.23□□□□□ -0.29
SNX21-201ENST00000342644 RPL18AQ02543 176 aaKnown RBP13.23□□□□□ -0.29
SNX21-201ENST00000342644 H7C2G1 150 aa13.23□□□□□ -0.29
SNX21-201ENST00000342644 RPL13AP40429 203 aaKnown RBP13.23□□□□□ -0.29
SNX21-201ENST00000342644 PSMB2P49721 201 aa13.23□□□□□ -0.29
SNX21-201ENST00000342644 UBE2V1Q13404 147 aa13.23□□□□□ -0.29
SNX21-201ENST00000342644 TRAV13-2A0A0B4J235 113 aa13.22□□□□□ -0.29
SNX21-201ENST00000342644 A0A096LNI7 61 aa13.21□□□□□ -0.29
SNX21-201ENST00000342644 LOC107984156A0A0G2JMH3 177 aa13.21□□□□□ -0.29
SNX21-201ENST00000342644 ARL17AQ8IVW1 177 aa13.21□□□□□ -0.29
SNX21-201ENST00000342644 GAGE2BQ13066 116 aa13.2□□□□□ -0.3
SNX21-201ENST00000342644 GAGE2EQ4V326 116 aa13.2□□□□□ -0.3
SNX21-201ENST00000342644 LINC00474Q9P2X8 69 aa13.2□□□□□ -0.3
SNX21-201ENST00000342644 GAGE2DQ9UEU5 116 aa13.2□□□□□ -0.3
SNX21-201ENST00000342644 PKHD1P08F94 4074 aa13.18□□□□□ -0.3
SNX21-201ENST00000342644 NDUFC2O95298 119 aa13.18□□□□□ -0.3
SNX21-201ENST00000342644 XAGE1AQ9HD64 81 aa13.18□□□□□ -0.3
SNX21-201ENST00000342644 COX6CP09669 75 aa13.17□□□□□ -0.3
SNX21-201ENST00000342644 SCGB1C2P0DMR2 95 aa13.17□□□□□ -0.3
SNX21-201ENST00000342644 C9orf129Q5T035 196 aaKnown RBP13.17□□□□□ -0.3
SNX21-201ENST00000342644 DNAH8Q96JB1 4490 aa13.16□□□□□ -0.3
SNX21-201ENST00000342644 KRTAP10-1P60331 282 aa13.16□□□□□ -0.3
SNX21-201ENST00000342644 IGKV2-24A0A0C4DH68 120 aa13.15□□□□□ -0.3
SNX21-201ENST00000342644 SPACA4Q8TDM5 124 aa13.15□□□□□ -0.3
SNX21-201ENST00000342644 TRBV20-1A0A075B6N2 111 aa13.14□□□□□ -0.31
SNX21-201ENST00000342644 CHTF8P0CG12 524 aa13.14□□□□□ -0.31
SNX21-201ENST00000342644 Q6ZSA8 131 aa13.14□□□□□ -0.31
SNX21-201ENST00000342644 PLA2G2DQ9UNK4 145 aa13.14□□□□□ -0.31
SNX21-201ENST00000342644 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.13□□□□□ -0.31
SNX21-201ENST00000342644 IGKV2-28A0A075B6P5 120 aa13.13□□□□□ -0.31
SNX21-201ENST00000342644 PANO1I0J062 215 aa13.13□□□□□ -0.31
SNX21-201ENST00000342644 IGKV2D-28P01615 120 aa13.13□□□□□ -0.31
SNX21-201ENST00000342644 LRP1BQ9NZR2 4599 aa13.12□□□□□ -0.31
SNX21-201ENST00000342644 TRIAP1O43715 76 aa13.12□□□□□ -0.31
SNX21-201ENST00000342644 DYNC1H1Q14204 4646 aaKnown RBP13.11□□□□□ -0.31
SNX21-201ENST00000342644 LINC00337Q8N6G1 96 aa13.11□□□□□ -0.31
SNX21-201ENST00000342644 OR13C6PQ8NH95 151 aa13.1□□□□□ -0.31
SNX21-201ENST00000342644 EPM2AB3EWF7 344 aa13.09□□□□□ -0.31
SNX21-201ENST00000342644 FAM30AQ9NZY2 134 aa13.09□□□□□ -0.31
SNX21-201ENST00000342644 A0A1W2PNN7 141 aa13.08□□□□□ -0.32
SNX21-201ENST00000342644 IGLV5-37A0A075B6J1 123 aa13.07□□□□□ -0.32
SNX21-201ENST00000342644 VPREB1P12018 145 aa13.07□□□□□ -0.32
SNX21-201ENST00000342644 ATXN8Q156A1 80 aa13.07□□□□□ -0.32
SNX21-201ENST00000342644 KRTAP7-1Q8IUC3 87 aa13.07□□□□□ -0.32
SNX21-201ENST00000342644 Q8NDZ9 215 aa13.07□□□□□ -0.32
SNX21-201ENST00000342644 A0A087WYN8 130 aa13.06□□□□□ -0.32
SNX21-201ENST00000342644 FAM168BA1KXE4 195 aa13.06□□□□□ -0.32
SNX21-201ENST00000342644 H3BMG7 143 aa13.06□□□□□ -0.32
SNX21-201ENST00000342644 NCR3O14931 201 aa13.06□□□□□ -0.32
SNX21-201ENST00000342644 TCL1BO95988 128 aa13.06□□□□□ -0.32
SNX21-201ENST00000342644 SERTAD4-AS1Q5TG53 156 aa13.06□□□□□ -0.32
SNX21-201ENST00000342644 DPH3Q96FX2 82 aa13.06□□□□□ -0.32
SNX21-201ENST00000342644 PLAC8Q9NZF1 115 aa13.06□□□□□ -0.32
SNX21-201ENST00000342644 TRBV10-2A0A0K0K1G8 114 aa13.05□□□□□ -0.32
SNX21-201ENST00000342644 RPL28P46779 137 aaKnown RBP13.05□□□□□ -0.32
SNX21-201ENST00000342644 S100A7L2Q5SY68 101 aa13.05□□□□□ -0.32
SNX21-201ENST00000342644 TMEM126AQ9H061 195 aa13.05□□□□□ -0.32
SNX21-201ENST00000342644 FAM19A5Q7Z5A7 132 aaPredicted RBP13.02□□□□□ -0.33
SNX21-201ENST00000342644 C22orf24Q9Y442 160 aa13.02□□□□□ -0.33
SNX21-201ENST00000342644 F8W1H4 67 aa13.01□□□□□ -0.33
SNX21-201ENST00000342644 NKAPP1Q8N9T2 125 aa13.01□□□□□ -0.33
SNX21-201ENST00000342644 CIRBP-AS1Q8TBR5 109 aa13.01□□□□□ -0.33
SNX21-201ENST00000342644 SMIM11BQ8TCY0 68 aa13.01□□□□□ -0.33
SNX21-201ENST00000342644 SCXQ7RTU7 201 aa13□□□□□ -0.33
SNX21-201ENST00000342644 M0R378 163 aa12.99□□□□□ -0.33
SNX21-201ENST00000342644 PRR3P79522 188 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms