RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 WWC2-AS2Q96NR7 200 aa10.36□□□□□ -0.75
UBE3B-202ENST00000342494 IGLV5-39A0A0G2JS06 123 aa10.36□□□□□ -0.75
UBE3B-202ENST00000342494 C6orf48Q9UBA6 75 aa10.36□□□□□ -0.75
UBE3B-202ENST00000342494 SMIM26A0A096LP01 95 aa10.35□□□□□ -0.75
UBE3B-202ENST00000342494 SOSTDC1Q6X4U4 206 aa10.33□□□□□ -0.76
UBE3B-202ENST00000342494 FAM19A4Q96LR4 140 aa10.33□□□□□ -0.76
UBE3B-202ENST00000342494 CRYGAP11844 174 aa10.33□□□□□ -0.76
UBE3B-202ENST00000342494 PHF5AQ7RTV0 110 aaKnown RBP10.32□□□□□ -0.76
UBE3B-202ENST00000342494 hDV103S1A0JD37 113 aa10.32□□□□□ -0.76
UBE3B-202ENST00000342494 Q6ZRP5 223 aa10.32□□□□□ -0.76
UBE3B-202ENST00000342494 F8P00451 2351 aa10.31□□□□□ -0.76
UBE3B-202ENST00000342494 LINC00846Q9NV44 126 aa10.31□□□□□ -0.76
UBE3B-202ENST00000342494 LINC00588Q9Y4M8 146 aa10.31□□□□□ -0.76
UBE3B-202ENST00000342494 SRCAPQ6ZRS2 3230 aa10.3□□□□□ -0.76
UBE3B-202ENST00000342494 Q8NAQ8 132 aa10.3□□□□□ -0.76
UBE3B-202ENST00000342494 TYMSOSQ8TAI1 123 aa10.3□□□□□ -0.76
UBE3B-202ENST00000342494 C1orf64Q8NEQ6 169 aa10.29□□□□□ -0.76
UBE3B-202ENST00000342494 TMEM254Q8TBM7 123 aa10.28□□□□□ -0.76
UBE3B-202ENST00000342494 ACANP16112 2415 aa10.28□□□□□ -0.76
UBE3B-202ENST00000342494 C7orf65Q6ZTY9 151 aa10.28□□□□□ -0.76
UBE3B-202ENST00000342494 CHTF8P0CG12 524 aa10.27□□□□□ -0.77
UBE3B-202ENST00000342494 J3QL48 77 aa10.26□□□□□ -0.77
UBE3B-202ENST00000342494 SPATA3Q8NHX4 192 aa10.26□□□□□ -0.77
UBE3B-202ENST00000342494 COL4A2P08572 1712 aa10.25□□□□□ -0.77
UBE3B-202ENST00000342494 CXCL6P80162 114 aa10.25□□□□□ -0.77
UBE3B-202ENST00000342494 Q8NBF4 154 aa10.25□□□□□ -0.77
UBE3B-202ENST00000342494 EPM2AB3EWF7 344 aa10.24□□□□□ -0.77
UBE3B-202ENST00000342494 PLA2G1BP04054 148 aaKnown RBP10.24□□□□□ -0.77
UBE3B-202ENST00000342494 Q9UF83 564 aa10.23□□□□□ -0.77
UBE3B-202ENST00000342494 SMIM29Q86T20 159 aa10.22□□□□□ -0.77
UBE3B-202ENST00000342494 ELOF1P60002 83 aaKnown RBP10.22□□□□□ -0.77
UBE3B-202ENST00000342494 ANKRD17O75179 2603 aaKnown RBP10.22□□□□□ -0.77
UBE3B-202ENST00000342494 IGLV5-45A0A087WSX0 123 aa10.22□□□□□ -0.77
UBE3B-202ENST00000342494 LINC01546A6NGU7 62 aa10.22□□□□□ -0.77
UBE3B-202ENST00000342494 PSPHP1O15172 72 aa10.22□□□□□ -0.77
UBE3B-202ENST00000342494 Q6ZRX8 168 aa10.22□□□□□ -0.77
UBE3B-202ENST00000342494 TP53AIP1Q9HCN2 124 aa10.22□□□□□ -0.77
UBE3B-202ENST00000342494 EP400Q96L91 3159 aa10.22□□□□□ -0.77
UBE3B-202ENST00000342494 PMAIP1Q13794 54 aa10.2□□□□□ -0.78
UBE3B-202ENST00000342494 GVQW2A0A096LPI5 108 aaPredicted RBP10.19□□□□□ -0.78
UBE3B-202ENST00000342494 LINC00476Q8WZB0 136 aa10.19□□□□□ -0.78
UBE3B-202ENST00000342494 EPG5Q9HCE0 2579 aa10.19□□□□□ -0.78
UBE3B-202ENST00000342494 LINC00313P59037 77 aa10.18□□□□□ -0.78
UBE3B-202ENST00000342494 RPL37AP61513 92 aaKnown RBP10.18□□□□□ -0.78
UBE3B-202ENST00000342494 PTPRBP23467 1997 aa10.17□□□□□ -0.78
UBE3B-202ENST00000342494 BCE1O60756 84 aa10.17□□□□□ -0.78
UBE3B-202ENST00000342494 C1orf195Q5TG92 126 aa10.17□□□□□ -0.78
UBE3B-202ENST00000342494 DNAH10OSP0CZ25 163 aa10.17□□□□□ -0.78
UBE3B-202ENST00000342494 CENPFP49454 3210 aa10.16□□□□□ -0.78
UBE3B-202ENST00000342494 A0A1B0GW54 56 aa10.15□□□□□ -0.78
UBE3B-202ENST00000342494 ST20-AS1Q8NBB2 130 aa10.15□□□□□ -0.78
UBE3B-202ENST00000342494 ATP11AUNQ6ZP68 121 aa10.14□□□□□ -0.79
UBE3B-202ENST00000342494 ACYP2P14621 99 aa10.14□□□□□ -0.79
UBE3B-202ENST00000342494 K7EIL1 84 aa10.14□□□□□ -0.79
UBE3B-202ENST00000342494 FLNBO75369 2602 aaKnown RBP10.13□□□□□ -0.79
UBE3B-202ENST00000342494 A0A1B0GU69 56 aa10.12□□□□□ -0.79
UBE3B-202ENST00000342494 Q96NJ1 140 aa10.12□□□□□ -0.79
UBE3B-202ENST00000342494 FAM218AQ96MZ4 157 aa10.12□□□□□ -0.79
UBE3B-202ENST00000342494 COL27A1Q8IZC6 1860 aaPredicted RBP10.1□□□□□ -0.79
UBE3B-202ENST00000342494 KRTAP10-11P60412 298 aa10.09□□□□□ -0.79
UBE3B-202ENST00000342494 FAM168BA1KXE4 195 aa10.07□□□□□ -0.8
UBE3B-202ENST00000342494 Q6ZQT0 140 aa10.07□□□□□ -0.8
UBE3B-202ENST00000342494 COX6B2Q6YFQ2 88 aa10.06□□□□□ -0.8
UBE3B-202ENST00000342494 KLK9Q2XQG4 91 aa10.06□□□□□ -0.8
UBE3B-202ENST00000342494 VPREB1P12018 145 aa10.05□□□□□ -0.8
UBE3B-202ENST00000342494 TRAV22A0A0B4J277 110 aa10.04□□□□□ -0.8
UBE3B-202ENST00000342494 LOC110117498A0A087WWA1 95 aa10.04□□□□□ -0.8
UBE3B-202ENST00000342494 CSNK1G2-AS1Q8NCQ2 148 aa10.03□□□□□ -0.8
UBE3B-202ENST00000342494 C19orf73Q9NVV2 129 aa10.02□□□□□ -0.8
UBE3B-202ENST00000342494 H3BPC8 53 aa10.02□□□□□ -0.81
UBE3B-202ENST00000342494 SERTAD4-AS1Q5TG53 156 aa10.01□□□□□ -0.81
UBE3B-202ENST00000342494 C8orf87E5RJ46 101 aa10.01□□□□□ -0.81
UBE3B-202ENST00000342494 CDIP1Q9H305 208 aa10.01□□□□□ -0.81
UBE3B-202ENST00000342494 TRBV7-4A0A0J9YYF1 115 aa10□□□□□ -0.81
UBE3B-202ENST00000342494 IGLV6-57P01721 117 aa9.99□□□□□ -0.81
UBE3B-202ENST00000342494 IGLV1-50A0A075B6I6 118 aa9.99□□□□□ -0.81
UBE3B-202ENST00000342494 SPAG11AQ6PDA7 123 aa9.99□□□□□ -0.81
UBE3B-202ENST00000342494 HECTD1Q9ULT8 2610 aa9.98□□□□□ -0.81
UBE3B-202ENST00000342494 LINC00304Q8N9R0 145 aa9.98□□□□□ -0.81
UBE3B-202ENST00000342494 MGAM2Q2M2H8 2515 aa9.97□□□□□ -0.81
UBE3B-202ENST00000342494 SMR3BP02814 79 aaPredicted RBP9.97□□□□□ -0.81
UBE3B-202ENST00000342494 SMCPP49901 116 aaPredicted RBP9.97□□□□□ -0.81
UBE3B-202ENST00000342494 A0A096LNT2 108 aa9.97□□□□□ -0.81
UBE3B-202ENST00000342494 A0A087WTM6 91 aa9.96□□□□□ -0.81
UBE3B-202ENST00000342494 A8MWP4 228 aa9.96□□□□□ -0.82
UBE3B-202ENST00000342494 KRTAP10-3P60369 221 aa9.96□□□□□ -0.82
UBE3B-202ENST00000342494 LOC101927531A0A1B0GV80 90 aa9.95□□□□□ -0.82
UBE3B-202ENST00000342494 MRPL34Q9BQ48 92 aaKnown RBP9.94□□□□□ -0.82
UBE3B-202ENST00000342494 KCNQ1DNQ9H478 68 aa9.94□□□□□ -0.82
UBE3B-202ENST00000342494 USP24Q9UPU5 2620 aa9.94□□□□□ -0.82
UBE3B-202ENST00000342494 IGLV8-61A0A075B6I0 122 aa9.94□□□□□ -0.82
UBE3B-202ENST00000342494 ZNF861PO60384 105 aa9.94□□□□□ -0.82
UBE3B-202ENST00000342494 PRR34Q9NV39 138 aa9.92□□□□□ -0.82
UBE3B-202ENST00000342494 TM2D3Q9BRN9 247 aa9.91□□□□□ -0.82
UBE3B-202ENST00000342494 LINC00336Q6ZUF6 198 aa9.91□□□□□ -0.82
UBE3B-202ENST00000342494 SSBP3-AS1Q7Z2R9 100 aa9.91□□□□□ -0.82
UBE3B-202ENST00000342494 C15orf56Q8N910 161 aa9.91□□□□□ -0.82
UBE3B-202ENST00000342494 LITAFQ99732 161 aa9.91□□□□□ -0.82
UBE3B-202ENST00000342494 DSCR10P59022 87 aa9.89□□□□□ -0.83
UBE3B-202ENST00000342494 K7EQZ3 153 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms