RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 C9orf163Q8N9P6 203 aa4.67□□□□□ -1.66
NUP43-201ENST00000340413 VPREB1P12018 145 aa4.66□□□□□ -1.66
NUP43-201ENST00000340413 LINC00336Q6ZUF6 198 aa4.66□□□□□ -1.66
NUP43-201ENST00000340413 PGPEP1Q9NXJ5 209 aa4.66□□□□□ -1.66
NUP43-201ENST00000340413 MEGF8Q7Z7M0 2845 aa4.66□□□□□ -1.66
NUP43-201ENST00000340413 IGKV2-28A0A075B6P5 120 aa4.66□□□□□ -1.66
NUP43-201ENST00000340413 A0A087WTM6 91 aa4.66□□□□□ -1.66
NUP43-201ENST00000340413 EIF4EBP3O60516 100 aaPredicted RBP4.66□□□□□ -1.66
NUP43-201ENST00000340413 IGKV2D-28P01615 120 aa4.66□□□□□ -1.66
NUP43-201ENST00000340413 TGP01266 2768 aa4.65□□□□□ -1.66
NUP43-201ENST00000340413 GHRHP01286 108 aa4.65□□□□□ -1.66
NUP43-201ENST00000340413 FBN3Q75N90 2809 aa4.65□□□□□ -1.67
NUP43-201ENST00000340413 LCE6AA0A183 80 aa4.65□□□□□ -1.67
NUP43-201ENST00000340413 PRYO14603 147 aa4.65□□□□□ -1.67
NUP43-201ENST00000340413 RPL13AP40429 203 aaKnown RBP4.65□□□□□ -1.67
NUP43-201ENST00000340413 HIGD2BQ4VC39 106 aa4.65□□□□□ -1.67
NUP43-201ENST00000340413 LY6G6CO95867 125 aa4.65□□□□□ -1.67
NUP43-201ENST00000340413 TRACP01848 142 aa4.65□□□□□ -1.67
NUP43-201ENST00000340413 PFN2P35080 140 aa4.65□□□□□ -1.67
NUP43-201ENST00000340413 UBE2V1Q13404 147 aa4.65□□□□□ -1.67
NUP43-201ENST00000340413 INAFM2P0DMQ5 153 aa4.64□□□□□ -1.67
NUP43-201ENST00000340413 PCP4P48539 62 aa4.64□□□□□ -1.67
NUP43-201ENST00000340413 ATXN8Q156A1 80 aa4.64□□□□□ -1.67
NUP43-201ENST00000340413 LINC00167Q96N53 147 aa4.64□□□□□ -1.67
NUP43-201ENST00000340413 SNCGO76070 127 aa4.64□□□□□ -1.67
NUP43-201ENST00000340413 H3BUT2 72 aa4.63□□□□□ -1.67
NUP43-201ENST00000340413 SLPIP03973 132 aa4.63□□□□□ -1.67
NUP43-201ENST00000340413 VAMP3Q15836 100 aa4.63□□□□□ -1.67
NUP43-201ENST00000340413 LINC00337Q8N6G1 96 aa4.63□□□□□ -1.67
NUP43-201ENST00000340413 PPDPFLQ8WWR9 84 aa4.63□□□□□ -1.67
NUP43-201ENST00000340413 F8W1H4 67 aa4.63□□□□□ -1.67
NUP43-201ENST00000340413 Q6ZRP5 223 aa4.63□□□□□ -1.67
NUP43-201ENST00000340413 KCNQ1DNQ9H478 68 aa4.63□□□□□ -1.67
NUP43-201ENST00000340413 OCIAD2Q56VL3 154 aa4.62□□□□□ -1.67
NUP43-201ENST00000340413 GAGE10A6NGK3 116 aa4.62□□□□□ -1.67
NUP43-201ENST00000340413 K7ERJ3 54 aa4.62□□□□□ -1.67
NUP43-201ENST00000340413 LST1O00453 97 aa4.62□□□□□ -1.67
NUP43-201ENST00000340413 SPCS1Q9Y6A9 102 aa4.62□□□□□ -1.67
NUP43-201ENST00000340413 C9orf129Q5T035 196 aaKnown RBP4.62□□□□□ -1.67
NUP43-201ENST00000340413 COL7A1Q02388 2944 aa4.62□□□□□ -1.67
NUP43-201ENST00000340413 A0A1B0GV90 55 aa4.61□□□□□ -1.67
NUP43-201ENST00000340413 H3BT86 120 aa4.61□□□□□ -1.67
NUP43-201ENST00000340413 SPRR1AP35321 89 aa4.61□□□□□ -1.67
NUP43-201ENST00000340413 DAND5Q8N907 189 aa4.61□□□□□ -1.67
NUP43-201ENST00000340413 H0Y9J4 135 aa4.61□□□□□ -1.67
NUP43-201ENST00000340413 TRIAP1O43715 76 aa4.61□□□□□ -1.67
NUP43-201ENST00000340413 TENM2Q9NT68 2774 aa4.6□□□□□ -1.67
NUP43-201ENST00000340413 PSMB2P49721 201 aa4.6□□□□□ -1.67
NUP43-201ENST00000340413 Q1RN00 199 aa4.6□□□□□ -1.67
NUP43-201ENST00000340413 C9orf116Q5BN46 136 aaPredicted RBP4.6□□□□□ -1.67
NUP43-201ENST00000340413 SDIM1Q6ZPB5 146 aa4.6□□□□□ -1.67
NUP43-201ENST00000340413 NKAPP1Q8N9T2 125 aa4.6□□□□□ -1.67
NUP43-201ENST00000340413 PLECQ15149 4684 aaKnown RBP4.6□□□□□ -1.67
NUP43-201ENST00000340413 DNAH17Q9UFH2 4485 aa4.6□□□□□ -1.67
NUP43-201ENST00000340413 S100A7L2Q5SY68 101 aa4.6□□□□□ -1.67
NUP43-201ENST00000340413 TRAV23DV6A0A075B6W5 121 aa4.6□□□□□ -1.67
NUP43-201ENST00000340413 SMIM11BQ8TCY0 68 aa4.6□□□□□ -1.67
NUP43-201ENST00000340413 LINC00526Q96FQ7 95 aa4.6□□□□□ -1.67
NUP43-201ENST00000340413 WFDC2Q14508 124 aa4.59□□□□□ -1.67
NUP43-201ENST00000340413 DIRC1Q969H9 104 aa4.59□□□□□ -1.67
NUP43-201ENST00000340413 RPL18AQ02543 176 aaKnown RBP4.59□□□□□ -1.67
NUP43-201ENST00000340413 SPACA4Q8TDM5 124 aa4.59□□□□□ -1.67
NUP43-201ENST00000340413 STARD9Q9P2P6 4700 aa4.59□□□□□ -1.67
NUP43-201ENST00000340413 IGLV1-50A0A075B6I6 118 aa4.59□□□□□ -1.68
NUP43-201ENST00000340413 H3BMG7 143 aa4.59□□□□□ -1.68
NUP43-201ENST00000340413 ELOF1P60002 83 aaKnown RBP4.58□□□□□ -1.68
NUP43-201ENST00000340413 PLAC8Q9NZF1 115 aa4.58□□□□□ -1.68
NUP43-201ENST00000340413 SCGB1C2P0DMR2 95 aa4.58□□□□□ -1.68
NUP43-201ENST00000340413 A0A0U1RRA0 63 aa4.58□□□□□ -1.68
NUP43-201ENST00000340413 RTL8CO15255 209 aa4.58□□□□□ -1.68
NUP43-201ENST00000340413 NPC2P61916 151 aa4.58□□□□□ -1.68
NUP43-201ENST00000340413 MRPL55Q7Z7F7 128 aaKnown RBP4.58□□□□□ -1.68
NUP43-201ENST00000340413 DHRS4-AS1Q9P1J3 65 aa4.58□□□□□ -1.68
NUP43-201ENST00000340413 TCL1BO95988 128 aa4.57□□□□□ -1.68
NUP43-201ENST00000340413 LINC01620Q4KN68 170 aa4.57□□□□□ -1.68
NUP43-201ENST00000340413 PRO0461Q9UI25 63 aa4.57□□□□□ -1.68
NUP43-201ENST00000340413 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.57□□□□□ -1.68
NUP43-201ENST00000340413 DNAH2Q9P225 4427 aa4.57□□□□□ -1.68
NUP43-201ENST00000340413 ZNF73O43830 326 aaPredicted RBP4.57□□□□□ -1.68
NUP43-201ENST00000340413 C7orf33Q8WU49 177 aa4.57□□□□□ -1.68
NUP43-201ENST00000340413 A0A096LNI7 61 aa4.56□□□□□ -1.68
NUP43-201ENST00000340413 KRTAP4-16G5E9R7 235 aaPredicted RBP4.56□□□□□ -1.68
NUP43-201ENST00000340413 COX7BP24311 80 aa4.56□□□□□ -1.68
NUP43-201ENST00000340413 LINC00575Q6W349 94 aa4.56□□□□□ -1.68
NUP43-201ENST00000340413 Q8NDZ9 215 aa4.56□□□□□ -1.68
NUP43-201ENST00000340413 C22orf24Q9Y442 160 aa4.56□□□□□ -1.68
NUP43-201ENST00000340413 TRBV10-3A0A0K0K1G6 114 aa4.56□□□□□ -1.68
NUP43-201ENST00000340413 Q6ZSA8 131 aa4.56□□□□□ -1.68
NUP43-201ENST00000340413 OR13C6PQ8NH95 151 aa4.56□□□□□ -1.68
NUP43-201ENST00000340413 IGLV5-52A0A0A0MRZ9 124 aa4.56□□□□□ -1.68
NUP43-201ENST00000340413 NCR3O14931 201 aa4.56□□□□□ -1.68
NUP43-201ENST00000340413 GAGE2EQ4V326 116 aa4.55□□□□□ -1.68
NUP43-201ENST00000340413 GAGE2DQ9UEU5 116 aa4.55□□□□□ -1.68
NUP43-201ENST00000340413 DNAH10Q8IVF4 4471 aa4.55□□□□□ -1.68
NUP43-201ENST00000340413 SLC25A20O43772 301 aa4.55□□□□□ -1.68
NUP43-201ENST00000340413 GAGE2BQ13066 116 aa4.55□□□□□ -1.68
NUP43-201ENST00000340413 SERTAD4-AS1Q5TG53 156 aa4.55□□□□□ -1.68
NUP43-201ENST00000340413 LINC00528Q8N1L1 170 aa4.55□□□□□ -1.68
NUP43-201ENST00000340413 XAGE1AQ9HD64 81 aa4.55□□□□□ -1.68
NUP43-201ENST00000340413 CSMD3Q7Z407 3707 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms