RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 HINT1P49773 126 aaPredicted RBP5.08□□□□□ -1.6
TMC1-202ENST00000340019 SOSTDC1Q6X4U4 206 aa5.08□□□□□ -1.6
TMC1-202ENST00000340019 MUSTN1Q8IVN3 82 aa5.08□□□□□ -1.6
TMC1-202ENST00000340019 LINC00308Q8TCZ7 52 aa5.08□□□□□ -1.6
TMC1-202ENST00000340019 SIGMAR1Q99720 223 aa5.08□□□□□ -1.6
TMC1-202ENST00000340019 PPDPFQ9H3Y8 114 aa5.08□□□□□ -1.6
TMC1-202ENST00000340019 GCSHP23434 173 aa5.08□□□□□ -1.6
TMC1-202ENST00000340019 PKD1P98161 4303 aa5.08□□□□□ -1.6
TMC1-202ENST00000340019 LOC107984156A0A0G2JMH3 177 aa5.07□□□□□ -1.6
TMC1-202ENST00000340019 NDUFC2-KCTD14E9PQ53 114 aa5.07□□□□□ -1.6
TMC1-202ENST00000340019 TLX1NBP0CAT3 122 aa5.07□□□□□ -1.6
TMC1-202ENST00000340019 IFITM1P13164 125 aa5.07□□□□□ -1.6
TMC1-202ENST00000340019 FXYD2P54710 66 aa5.07□□□□□ -1.6
TMC1-202ENST00000340019 ARL17AQ8IVW1 177 aa5.07□□□□□ -1.6
TMC1-202ENST00000340019 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.07□□□□□ -1.6
TMC1-202ENST00000340019 NPC2P61916 151 aa5.07□□□□□ -1.6
TMC1-202ENST00000340019 TNP2Q05952 138 aa5.06□□□□□ -1.6
TMC1-202ENST00000340019 SND1-IT1Q9HBX3 110 aa5.06□□□□□ -1.6
TMC1-202ENST00000340019 Q6ZRP5 223 aa5.06□□□□□ -1.6
TMC1-202ENST00000340019 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.05□□□□□ -1.6
TMC1-202ENST00000340019 TAX1BP3O14907 124 aa5.05□□□□□ -1.6
TMC1-202ENST00000340019 RPL24P83731 157 aaKnown RBP5.05□□□□□ -1.6
TMC1-202ENST00000340019 RYR3Q15413 4870 aa5.05□□□□□ -1.6
TMC1-202ENST00000340019 A4D1N5 150 aa5.05□□□□□ -1.6
TMC1-202ENST00000340019 COPS9Q8WXC6 57 aa5.05□□□□□ -1.6
TMC1-202ENST00000340019 C9orf163Q8N9P6 203 aa5.05□□□□□ -1.6
TMC1-202ENST00000340019 SS18L2Q9UHA2 77 aa5.04□□□□□ -1.6
TMC1-202ENST00000340019 A0A1B0GWB2 263 aa5.04□□□□□ -1.6
TMC1-202ENST00000340019 XAGE1AQ9HD64 81 aa5.03□□□□□ -1.6
TMC1-202ENST00000340019 LOC107984640A0A0U1RRK4 108 aa5.03□□□□□ -1.6
TMC1-202ENST00000340019 CFC1BP0CG36 223 aa5.03□□□□□ -1.6
TMC1-202ENST00000340019 CFC1P0CG37 223 aa5.03□□□□□ -1.6
TMC1-202ENST00000340019 GAGE2EQ4V326 116 aa5.03□□□□□ -1.6
TMC1-202ENST00000340019 C9orf129Q5T035 196 aaKnown RBP5.03□□□□□ -1.6
TMC1-202ENST00000340019 Q8NDZ9 215 aa5.03□□□□□ -1.6
TMC1-202ENST00000340019 GAGE2DQ9UEU5 116 aa5.03□□□□□ -1.6
TMC1-202ENST00000340019 DNAH8Q96JB1 4490 aa5.03□□□□□ -1.6
TMC1-202ENST00000340019 RPL18AQ02543 176 aaKnown RBP5.03□□□□□ -1.6
TMC1-202ENST00000340019 NHP2Q9NX24 153 aaKnown RBP5.03□□□□□ -1.6
TMC1-202ENST00000340019 NDUFC2O95298 119 aa5.02□□□□□ -1.61
TMC1-202ENST00000340019 IGKV2-28A0A075B6P5 120 aa5.02□□□□□ -1.61
TMC1-202ENST00000340019 A0A0B4J2C4 111 aa5.02□□□□□ -1.61
TMC1-202ENST00000340019 A6NDN8 102 aa5.02□□□□□ -1.61
TMC1-202ENST00000340019 C16orf90A8MZG2 172 aa5.02□□□□□ -1.61
TMC1-202ENST00000340019 K7ERJ3 54 aa5.02□□□□□ -1.61
TMC1-202ENST00000340019 IGKV2D-28P01615 120 aa5.02□□□□□ -1.61
TMC1-202ENST00000340019 FUSP35637 526 aaKnown RBP eCLIP5.02□□□□□ -1.61
TMC1-202ENST00000340019 SDIM1Q6ZPB5 146 aa5.02□□□□□ -1.61
TMC1-202ENST00000340019 LINC00528Q8N1L1 170 aa5.02□□□□□ -1.61
TMC1-202ENST00000340019 LINC01620Q4KN68 170 aa5.01□□□□□ -1.61
TMC1-202ENST00000340019 GTF2H5Q6ZYL4 71 aa5.01□□□□□ -1.61
TMC1-202ENST00000340019 A0A096LNI7 61 aa5.01□□□□□ -1.61
TMC1-202ENST00000340019 GAGE2BQ13066 116 aa5.01□□□□□ -1.61
TMC1-202ENST00000340019 PKHD1P08F94 4074 aa5.01□□□□□ -1.61
TMC1-202ENST00000340019 GAGE10A6NGK3 116 aa5□□□□□ -1.61
TMC1-202ENST00000340019 KRTAP10-2P60368 255 aa5□□□□□ -1.61
TMC1-202ENST00000340019 LINC00336Q6ZUF6 198 aa5□□□□□ -1.61
TMC1-202ENST00000340019 IGLV5-52A0A0A0MRZ9 124 aa5□□□□□ -1.61
TMC1-202ENST00000340019 PRR3P79522 188 aaKnown RBP5□□□□□ -1.61
TMC1-202ENST00000340019 PLA2G2DQ9UNK4 145 aa5□□□□□ -1.61
TMC1-202ENST00000340019 PKIGQ9Y2B9 76 aa5□□□□□ -1.61
TMC1-202ENST00000340019 VPREB1P12018 145 aa5□□□□□ -1.61
TMC1-202ENST00000340019 KRTAP7-1Q8IUC3 87 aa5□□□□□ -1.61
TMC1-202ENST00000340019 LINC00337Q8N6G1 96 aa5□□□□□ -1.61
TMC1-202ENST00000340019 PRO1854Q9UHT4 67 aa4.99□□□□□ -1.61
TMC1-202ENST00000340019 SERTAD4-AS1Q5TG53 156 aa4.99□□□□□ -1.61
TMC1-202ENST00000340019 SMIM20Q8N5G0 67 aa4.99□□□□□ -1.61
TMC1-202ENST00000340019 FAM168BA1KXE4 195 aa4.98□□□□□ -1.61
TMC1-202ENST00000340019 RAB37Q96AX2 223 aa4.98□□□□□ -1.61
TMC1-202ENST00000340019 IGKV2-24A0A0C4DH68 120 aa4.98□□□□□ -1.61
TMC1-202ENST00000340019 TRBV10-2A0A0K0K1G8 114 aa4.98□□□□□ -1.61
TMC1-202ENST00000340019 CHTF8P0CG12 524 aa4.98□□□□□ -1.61
TMC1-202ENST00000340019 LRP1BQ9NZR2 4599 aa4.98□□□□□ -1.61
TMC1-202ENST00000340019 IGLV5-37A0A075B6J1 123 aa4.98□□□□□ -1.61
TMC1-202ENST00000340019 TRAV13-2A0A0B4J235 113 aa4.98□□□□□ -1.61
TMC1-202ENST00000340019 PANO1I0J062 215 aa4.98□□□□□ -1.61
TMC1-202ENST00000340019 NCR3O14931 201 aa4.97□□□□□ -1.61
TMC1-202ENST00000340019 C5orf47Q569G3 176 aa4.97□□□□□ -1.61
TMC1-202ENST00000340019 LINC00474Q9P2X8 69 aa4.97□□□□□ -1.61
TMC1-202ENST00000340019 A0A1B0GVY2 172 aa4.97□□□□□ -1.61
TMC1-202ENST00000340019 A0A1W2PNN7 141 aa4.97□□□□□ -1.61
TMC1-202ENST00000340019 K7EP34 96 aa4.97□□□□□ -1.61
TMC1-202ENST00000340019 SPACA4Q8TDM5 124 aa4.97□□□□□ -1.61
TMC1-202ENST00000340019 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.97□□□□□ -1.61
TMC1-202ENST00000340019 RPL13AP40429 203 aaKnown RBP4.96□□□□□ -1.61
TMC1-202ENST00000340019 EPM2AB3EWF7 344 aa4.96□□□□□ -1.62
TMC1-202ENST00000340019 IGLV6-57P01721 117 aa4.96□□□□□ -1.62
TMC1-202ENST00000340019 DYNC1H1Q14204 4646 aaKnown RBP4.96□□□□□ -1.62
TMC1-202ENST00000340019 C9orf118A6NHY6 69 aa4.95□□□□□ -1.62
TMC1-202ENST00000340019 J3QR89 54 aa4.95□□□□□ -1.62
TMC1-202ENST00000340019 M0R378 163 aa4.95□□□□□ -1.62
TMC1-202ENST00000340019 M0QXV9 152 aa4.95□□□□□ -1.62
TMC1-202ENST00000340019 FAM19A5Q7Z5A7 132 aaPredicted RBP4.95□□□□□ -1.62
TMC1-202ENST00000340019 TMEM126AQ9H061 195 aa4.95□□□□□ -1.62
TMC1-202ENST00000340019 C22orf24Q9Y442 160 aa4.95□□□□□ -1.62
TMC1-202ENST00000340019 H7C2G1 150 aa4.95□□□□□ -1.62
TMC1-202ENST00000340019 NKAPP1Q8N9T2 125 aa4.95□□□□□ -1.62
TMC1-202ENST00000340019 TRBV10-3A0A0K0K1G6 114 aa4.94□□□□□ -1.62
TMC1-202ENST00000340019 OR13C6PQ8NH95 151 aa4.94□□□□□ -1.62
TMC1-202ENST00000340019 C7orf33Q8WU49 177 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms