RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 C1orf195Q5TG92 126 aa6.27□□□□□ -1.41
RTN3-202ENST00000339997 ODF3Q96PU9 254 aa6.27□□□□□ -1.41
RTN3-202ENST00000339997 ZNF843Q8N446 348 aa6.27□□□□□ -1.41
RTN3-202ENST00000339997 IMUPQ9GZP8 106 aa6.27□□□□□ -1.41
RTN3-202ENST00000339997 PRO3102Q9H379 93 aa6.27□□□□□ -1.41
RTN3-202ENST00000339997 M0R2N4 97 aa6.27□□□□□ -1.41
RTN3-202ENST00000339997 FSTL3O95633 263 aa6.27□□□□□ -1.41
RTN3-202ENST00000339997 LINC00846Q9NV44 126 aa6.27□□□□□ -1.41
RTN3-202ENST00000339997 Q9UF83 564 aa6.27□□□□□ -1.41
RTN3-202ENST00000339997 Q8N3U1 123 aa6.27□□□□□ -1.41
RTN3-202ENST00000339997 ZNF73O43830 326 aaPredicted RBP6.26□□□□□ -1.41
RTN3-202ENST00000339997 C11orf71Q6IPW1 123 aa6.26□□□□□ -1.41
RTN3-202ENST00000339997 CD164L2Q6UWJ8 174 aa6.26□□□□□ -1.41
RTN3-202ENST00000339997 ANK2Q01484 3957 aa6.26□□□□□ -1.41
RTN3-202ENST00000339997 TRBV7-6A0A0J9YX20 115 aa6.26□□□□□ -1.41
RTN3-202ENST00000339997 SMCPP49901 116 aaPredicted RBP6.26□□□□□ -1.41
RTN3-202ENST00000339997 C6orf223Q8N319 242 aa6.26□□□□□ -1.41
RTN3-202ENST00000339997 MIFP14174 115 aa6.26□□□□□ -1.41
RTN3-202ENST00000339997 ODF3L2Q3SX64 289 aa6.26□□□□□ -1.41
RTN3-202ENST00000339997 PTPRBP23467 1997 aa6.26□□□□□ -1.41
RTN3-202ENST00000339997 TRBV10-3A0A0K0K1G6 114 aa6.25□□□□□ -1.41
RTN3-202ENST00000339997 SMR3AQ99954 134 aa6.25□□□□□ -1.41
RTN3-202ENST00000339997 COL5A1P20908 1838 aaPredicted RBP6.25□□□□□ -1.41
RTN3-202ENST00000339997 ZNF702PQ9H963 129 aa6.25□□□□□ -1.41
RTN3-202ENST00000339997 Q8N2B8 174 aa6.25□□□□□ -1.41
RTN3-202ENST00000339997 LINC01006Q8NI28 216 aa6.25□□□□□ -1.41
RTN3-202ENST00000339997 CHCHD7Q9BUK0 85 aa6.25□□□□□ -1.41
RTN3-202ENST00000339997 ITPR3Q14573 2671 aa6.24□□□□□ -1.41
RTN3-202ENST00000339997 IGLV9-49A0A0B4J1Y8 123 aa6.24□□□□□ -1.41
RTN3-202ENST00000339997 SPINK1P00995 79 aa6.24□□□□□ -1.41
RTN3-202ENST00000339997 OXLD1Q5BKU9 147 aa6.24□□□□□ -1.41
RTN3-202ENST00000339997 LINC00208Q96KT6 92 aa6.24□□□□□ -1.41
RTN3-202ENST00000339997 KPRPQ5T749 579 aaPredicted RBP6.24□□□□□ -1.41
RTN3-202ENST00000339997 VPREB1P12018 145 aa6.24□□□□□ -1.41
RTN3-202ENST00000339997 CHD6Q8TD26 2715 aa6.23□□□□□ -1.41
RTN3-202ENST00000339997 LY6G6CO95867 125 aa6.23□□□□□ -1.41
RTN3-202ENST00000339997 LINC00337Q8N6G1 96 aa6.23□□□□□ -1.41
RTN3-202ENST00000339997 Q8N814 137 aa6.23□□□□□ -1.41
RTN3-202ENST00000339997 IGLV1-40P01703 118 aa6.22□□□□□ -1.41
RTN3-202ENST00000339997 KRTAP10-9P60411 292 aa6.22□□□□□ -1.41
RTN3-202ENST00000339997 PSMG3-AS1Q96PY0 264 aa6.22□□□□□ -1.41
RTN3-202ENST00000339997 Q6JHZ5 121 aa6.22□□□□□ -1.41
RTN3-202ENST00000339997 DHRS4-AS1Q9P1J3 65 aa6.22□□□□□ -1.41
RTN3-202ENST00000339997 PCSK5Q92824 1860 aa6.22□□□□□ -1.41
RTN3-202ENST00000339997 BEAN1Q3B7T3 259 aa6.21□□□□□ -1.41
RTN3-202ENST00000339997 PCOTHQ58A44 107 aa6.21□□□□□ -1.42
RTN3-202ENST00000339997 C10orf142B7Z368 130 aa6.21□□□□□ -1.42
RTN3-202ENST00000339997 LINC01547P58512 204 aaPredicted RBP6.21□□□□□ -1.42
RTN3-202ENST00000339997 LINC00474Q9P2X8 69 aa6.21□□□□□ -1.42
RTN3-202ENST00000339997 TRRAPQ9Y4A5 3859 aa6.21□□□□□ -1.42
RTN3-202ENST00000339997 BRI3O95415 125 aa6.21□□□□□ -1.42
RTN3-202ENST00000339997 RETNLBQ9BQ08 111 aa6.21□□□□□ -1.42
RTN3-202ENST00000339997 SMIM26A0A096LP01 95 aa6.2□□□□□ -1.42
RTN3-202ENST00000339997 MRGPRG-AS1Q2M3A8 158 aa6.2□□□□□ -1.42
RTN3-202ENST00000339997 LINC00575Q6W349 94 aa6.2□□□□□ -1.42
RTN3-202ENST00000339997 TRAV10A0A0B4J240 114 aa6.2□□□□□ -1.42
RTN3-202ENST00000339997 RPL28P46779 137 aaKnown RBP6.2□□□□□ -1.42
RTN3-202ENST00000339997 M0R378 163 aa6.19□□□□□ -1.42
RTN3-202ENST00000339997 NUPR2A6NF83 97 aa6.19□□□□□ -1.42
RTN3-202ENST00000339997 ACYP2P14621 99 aa6.19□□□□□ -1.42
RTN3-202ENST00000339997 SERTAD4-AS1Q5TG53 156 aa6.19□□□□□ -1.42
RTN3-202ENST00000339997 Q8IZM0 81 aa6.18□□□□□ -1.42
RTN3-202ENST00000339997 AMELXQ99217 191 aa6.18□□□□□ -1.42
RTN3-202ENST00000339997 C4orf26Q17RF5 130 aa6.18□□□□□ -1.42
RTN3-202ENST00000339997 TRAV7A0A075B6U4 112 aa6.18□□□□□ -1.42
RTN3-202ENST00000339997 C1orf137Q5JT78 98 aa6.18□□□□□ -1.42
RTN3-202ENST00000339997 CEP192Q8TEP8 1941 aa6.18□□□□□ -1.42
RTN3-202ENST00000339997 NOTCH1P46531 2555 aa6.17□□□□□ -1.42
RTN3-202ENST00000339997 PRO0461Q9UI25 63 aa6.16□□□□□ -1.42
RTN3-202ENST00000339997 hDV103S1A0JD37 113 aa6.16□□□□□ -1.42
RTN3-202ENST00000339997 CIRBP-AS1Q8TBR5 109 aa6.16□□□□□ -1.42
RTN3-202ENST00000339997 FAM218AQ96MZ4 157 aa6.16□□□□□ -1.42
RTN3-202ENST00000339997 A0A087WSZ3 146 aa6.16□□□□□ -1.42
RTN3-202ENST00000339997 PLAC8L1A1L4L8 177 aa6.16□□□□□ -1.42
RTN3-202ENST00000339997 LELP1Q5T871 98 aa6.16□□□□□ -1.42
RTN3-202ENST00000339997 ESRGQ1W209 222 aa6.16□□□□□ -1.42
RTN3-202ENST00000339997 RAI1Q7Z5J4 1906 aaPredicted RBP6.16□□□□□ -1.42
RTN3-202ENST00000339997 ITPR1Q14643 2758 aa6.15□□□□□ -1.42
RTN3-202ENST00000339997 KIF25-AS1Q9Y6Z4 181 aa6.15□□□□□ -1.43
RTN3-202ENST00000339997 DMBT1Q9UGM3 2413 aaPredicted RBP6.15□□□□□ -1.43
RTN3-202ENST00000339997 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.15□□□□□ -1.43
RTN3-202ENST00000339997 TMEM254Q8TBM7 123 aa6.15□□□□□ -1.43
RTN3-202ENST00000339997 FHL2Q14192 279 aa6.14□□□□□ -1.43
RTN3-202ENST00000339997 C10orf25Q5T742 122 aa6.14□□□□□ -1.43
RTN3-202ENST00000339997 BAHCC1Q9P281 2608 aa6.14□□□□□ -1.43
RTN3-202ENST00000339997 Q6ZTC4 211 aa6.13□□□□□ -1.43
RTN3-202ENST00000339997 LY6G6DO95868 133 aa6.13□□□□□ -1.43
RTN3-202ENST00000339997 IGHV6-1A0A0B4J1U7 121 aa6.12□□□□□ -1.43
RTN3-202ENST00000339997 TRBV7-7A0A0K0K1E9 115 aa6.12□□□□□ -1.43
RTN3-202ENST00000339997 LINC00315P59091 139 aa6.12□□□□□ -1.43
RTN3-202ENST00000339997 COX8CQ7Z4L0 72 aa6.12□□□□□ -1.43
RTN3-202ENST00000339997 PRLHP81277 87 aa6.12□□□□□ -1.43
RTN3-202ENST00000339997 MUC7Q8TAX7 377 aa6.11□□□□□ -1.43
RTN3-202ENST00000339997 PRORYQ9H606 182 aa6.11□□□□□ -1.43
RTN3-202ENST00000339997 COX17Q14061 63 aa6.11□□□□□ -1.43
RTN3-202ENST00000339997 LYSTQ99698 3801 aa6.11□□□□□ -1.43
RTN3-202ENST00000339997 CRYGAP11844 174 aa6.1□□□□□ -1.43
RTN3-202ENST00000339997 EIF4EBP3O60516 100 aaPredicted RBP6.1□□□□□ -1.43
RTN3-202ENST00000339997 SETXQ7Z333 2677 aaKnown RBP6.1□□□□□ -1.43
RTN3-202ENST00000339997 SPINT4Q6UDR6 99 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms