RNA–Protein interactions for RNA: ENST00000339497.7

CCNY-202, Transcript of cyclin Y, humanhuman

TSL 1 (best) BASIC

Gene CCNY, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-202ENST00000339497 CDIP1Q9H305 208 aa11.08□□□□□ -0.64
CCNY-202ENST00000339497 C2orf48Q96LS8 159 aa11.08□□□□□ -0.64
CCNY-202ENST00000339497 LINC00575Q6W349 94 aa11.08□□□□□ -0.64
CCNY-202ENST00000339497 PRO0461Q9UI25 63 aa11.08□□□□□ -0.64
CCNY-202ENST00000339497 IGLV9-49A0A0B4J1Y8 123 aa11.07□□□□□ -0.64
CCNY-202ENST00000339497 C1orf137Q5JT78 98 aa11.07□□□□□ -0.64
CCNY-202ENST00000339497 LINC00846Q9NV44 126 aa11.07□□□□□ -0.64
CCNY-202ENST00000339497 FAM19A3Q7Z5A8 133 aa11.07□□□□□ -0.64
CCNY-202ENST00000339497 C10orf25Q5T742 122 aa11.06□□□□□ -0.64
CCNY-202ENST00000339497 FREM2Q5SZK8 3169 aa11.06□□□□□ -0.64
CCNY-202ENST00000339497 CHKB-CPT1BH3BT56 60 aa11.06□□□□□ -0.64
CCNY-202ENST00000339497 KRTAP24-1Q3LI83 254 aa11.05□□□□□ -0.64
CCNY-202ENST00000339497 NBEAQ8NFP9 2946 aa11.04□□□□□ -0.64
CCNY-202ENST00000339497 REG3GQ6UW15 175 aa11.04□□□□□ -0.64
CCNY-202ENST00000339497 FAM218AQ96MZ4 157 aa11.04□□□□□ -0.64
CCNY-202ENST00000339497 C7orf33Q8WU49 177 aa11.04□□□□□ -0.64
CCNY-202ENST00000339497 NUPR2A6NF83 97 aa11.02□□□□□ -0.64
CCNY-202ENST00000339497 LINC00474Q9P2X8 69 aa11.02□□□□□ -0.65
CCNY-202ENST00000339497 PRR4Q16378 134 aa11.02□□□□□ -0.65
CCNY-202ENST00000339497 MRPL55Q7Z7F7 128 aaKnown RBP11.02□□□□□ -0.65
CCNY-202ENST00000339497 Q8NAQ8 132 aa11.02□□□□□ -0.65
CCNY-202ENST00000339497 C6orf48Q9UBA6 75 aa11.01□□□□□ -0.65
CCNY-202ENST00000339497 MPLKIPQ8TAP9 179 aa11.01□□□□□ -0.65
CCNY-202ENST00000339497 LINC01556Q5JQF7 62 aa11□□□□□ -0.65
CCNY-202ENST00000339497 SBSPONQ8IVN8 264 aa11□□□□□ -0.65
CCNY-202ENST00000339497 LITAFQ99732 161 aa11□□□□□ -0.65
CCNY-202ENST00000339497 FAM30AQ9NZY2 134 aa10.98□□□□□ -0.65
CCNY-202ENST00000339497 TEX15Q9BXT5 2789 aa10.98□□□□□ -0.65
CCNY-202ENST00000339497 CSNK1G2-AS1Q8NCQ2 148 aa10.97□□□□□ -0.65
CCNY-202ENST00000339497 PRLHP81277 87 aa10.97□□□□□ -0.65
CCNY-202ENST00000339497 EIF4EBP3O60516 100 aaPredicted RBP10.97□□□□□ -0.65
CCNY-202ENST00000339497 Q6ZVQ6 151 aa10.96□□□□□ -0.65
CCNY-202ENST00000339497 BOD1L1Q8NFC6 3051 aa10.96□□□□□ -0.65
CCNY-202ENST00000339497 ZNF706Q9Y5V0 76 aaPredicted RBP10.96□□□□□ -0.65
CCNY-202ENST00000339497 C22orf24Q9Y442 160 aa10.96□□□□□ -0.66
CCNY-202ENST00000339497 F8WDY8 70 aa10.95□□□□□ -0.66
CCNY-202ENST00000339497 GIG44P09565 113 aaPredicted RBP10.95□□□□□ -0.66
CCNY-202ENST00000339497 FRYLO94915 3013 aa10.94□□□□□ -0.66
CCNY-202ENST00000339497 A0A087WSZ3 146 aa10.93□□□□□ -0.66
CCNY-202ENST00000339497 PRYO14603 147 aa10.93□□□□□ -0.66
CCNY-202ENST00000339497 TRAV7A0A075B6U4 112 aa10.93□□□□□ -0.66
CCNY-202ENST00000339497 DEFB116Q30KQ4 102 aa10.93□□□□□ -0.66
CCNY-202ENST00000339497 BRK1Q8WUW1 75 aa10.93□□□□□ -0.66
CCNY-202ENST00000339497 IGSF10Q6WRI0 2623 aa10.92□□□□□ -0.66
CCNY-202ENST00000339497 COL6A3P12111 3177 aa10.92□□□□□ -0.66
CCNY-202ENST00000339497 NDUFC1O43677 76 aa10.92□□□□□ -0.66
CCNY-202ENST00000339497 Q9BRP9 147 aa10.92□□□□□ -0.66
CCNY-202ENST00000339497 C19orf73Q9NVV2 129 aa10.92□□□□□ -0.66
CCNY-202ENST00000339497 H3BNG1 76 aa10.9□□□□□ -0.66
CCNY-202ENST00000339497 STAB1Q9NY15 2570 aa10.9□□□□□ -0.66
CCNY-202ENST00000339497 LINC01547P58512 204 aaPredicted RBP10.9□□□□□ -0.66
CCNY-202ENST00000339497 Q8N9L7 120 aa10.9□□□□□ -0.66
CCNY-202ENST00000339497 LINC00167Q96N53 147 aa10.89□□□□□ -0.67
CCNY-202ENST00000339497 IGLV5-52A0A0A0MRZ9 124 aa10.89□□□□□ -0.67
CCNY-202ENST00000339497 ZNF575Q86XF7 245 aa10.89□□□□□ -0.67
CCNY-202ENST00000339497 ATMQ13315 3056 aa10.89□□□□□ -0.67
CCNY-202ENST00000339497 KRTAP1-3Q8IUG1 177 aa10.89□□□□□ -0.67
CCNY-202ENST00000339497 SPEGQ15772 3267 aa10.88□□□□□ -0.67
CCNY-202ENST00000339497 KIAA0087Q14695 138 aa10.88□□□□□ -0.67
CCNY-202ENST00000339497 ADGRG4Q8IZF6 3080 aa10.88□□□□□ -0.67
CCNY-202ENST00000339497 TRBV7-7A0A0K0K1E9 115 aa10.88□□□□□ -0.67
CCNY-202ENST00000339497 KRTAP10-3P60369 221 aa10.88□□□□□ -0.67
CCNY-202ENST00000339497 SPATA3Q8NHX4 192 aa10.87□□□□□ -0.67
CCNY-202ENST00000339497 FLNCQ14315 2725 aa10.87□□□□□ -0.67
CCNY-202ENST00000339497 GCN1Q92616 2671 aaKnown RBP10.86□□□□□ -0.67
CCNY-202ENST00000339497 SMCR5Q8TEV8 140 aa10.86□□□□□ -0.67
CCNY-202ENST00000339497 NOTCH1P46531 2555 aa10.86□□□□□ -0.67
CCNY-202ENST00000339497 SETXQ7Z333 2677 aaKnown RBP10.86□□□□□ -0.67
CCNY-202ENST00000339497 CIRBP-AS1Q8TBR5 109 aa10.85□□□□□ -0.67
CCNY-202ENST00000339497 LINC00208Q96KT6 92 aa10.85□□□□□ -0.67
CCNY-202ENST00000339497 COL6A5A8TX70 2615 aa10.85□□□□□ -0.67
CCNY-202ENST00000339497 LINC00588Q9Y4M8 146 aa10.85□□□□□ -0.67
CCNY-202ENST00000339497 MDFIQ99750 246 aa10.84□□□□□ -0.67
CCNY-202ENST00000339497 UNC79Q9P2D8 2635 aa10.83□□□□□ -0.68
CCNY-202ENST00000339497 C1orf134Q5TEV5 83 aa10.83□□□□□ -0.68
CCNY-202ENST00000339497 CASC2Q6XLA1 102 aa10.83□□□□□ -0.68
CCNY-202ENST00000339497 UBR5O95071 2799 aaPredicted RBP10.82□□□□□ -0.68
CCNY-202ENST00000339497 KALRNO60229 2985 aa10.82□□□□□ -0.68
CCNY-202ENST00000339497 ATP5EP56381 51 aaPredicted RBP10.8□□□□□ -0.68
CCNY-202ENST00000339497 ELOF1P60002 83 aaKnown RBP10.8□□□□□ -0.68
CCNY-202ENST00000339497 NHLRC4P0CG21 123 aaPredicted RBP10.8□□□□□ -0.68
CCNY-202ENST00000339497 KRTAP1-1Q07627 177 aa10.8□□□□□ -0.68
CCNY-202ENST00000339497 DMXL2Q8TDJ6 3036 aa10.79□□□□□ -0.68
CCNY-202ENST00000339497 COL12A1Q99715 3063 aa10.79□□□□□ -0.68
CCNY-202ENST00000339497 IGHV6-1A0A0B4J1U7 121 aa10.79□□□□□ -0.68
CCNY-202ENST00000339497 Q6ZRP5 223 aa10.79□□□□□ -0.68
CCNY-202ENST00000339497 TACC2O95359 2948 aa10.79□□□□□ -0.68
CCNY-202ENST00000339497 SPTSSBQ8NFR3 76 aa10.78□□□□□ -0.68
CCNY-202ENST00000339497 KRTAP10-11P60412 298 aa10.77□□□□□ -0.69
CCNY-202ENST00000339497 EYSQ5T1H1 3165 aa10.77□□□□□ -0.69
CCNY-202ENST00000339497 TMEM254Q8TBM7 123 aa10.76□□□□□ -0.69
CCNY-202ENST00000339497 NBEAL2Q6ZNJ1 2754 aa10.76□□□□□ -0.69
CCNY-202ENST00000339497 CXCL6P80162 114 aa10.75□□□□□ -0.69
CCNY-202ENST00000339497 VPREB1P12018 145 aa10.75□□□□□ -0.69
CCNY-202ENST00000339497 Q6ZQT0 140 aa10.75□□□□□ -0.69
CCNY-202ENST00000339497 GVQW2A0A096LPI5 108 aaPredicted RBP10.75□□□□□ -0.69
CCNY-202ENST00000339497 ST20-AS1Q8NBB2 130 aa10.74□□□□□ -0.69
CCNY-202ENST00000339497 Q6ZRX8 168 aa10.73□□□□□ -0.69
CCNY-202ENST00000339497 PHF5AQ7RTV0 110 aaKnown RBP10.73□□□□□ -0.69
CCNY-202ENST00000339497 LINC00612Q8N6U2 182 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms