RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 LYPD5Q6UWN5 251 aa12.91□□□□□ -0.34
PSPC1-201ENST00000338910 GHRHP01286 108 aa12.9□□□□□ -0.34
PSPC1-201ENST00000338910 IGHV4-30-4P0DP06 118 aa12.89□□□□□ -0.35
PSPC1-201ENST00000338910 NANOS2P60321 138 aaKnown RBP12.89□□□□□ -0.35
PSPC1-201ENST00000338910 Q8N814 137 aa12.89□□□□□ -0.35
PSPC1-201ENST00000338910 A0A096LPF7 62 aa12.89□□□□□ -0.35
PSPC1-201ENST00000338910 IGHV4-28A0A0C4DH34 117 aa12.89□□□□□ -0.35
PSPC1-201ENST00000338910 C6orf226Q5I0X4 101 aa12.88□□□□□ -0.35
PSPC1-201ENST00000338910 PRO0255Q9UI72 69 aa12.88□□□□□ -0.35
PSPC1-201ENST00000338910 Q5XG85 94 aa12.88□□□□□ -0.35
PSPC1-201ENST00000338910 FAM19A1Q7Z5A9 133 aa12.88□□□□□ -0.35
PSPC1-201ENST00000338910 C11orf68Q9H3H3 251 aaKnown RBP12.88□□□□□ -0.35
PSPC1-201ENST00000338910 TRAV23DV6A0A075B6W5 121 aa12.87□□□□□ -0.35
PSPC1-201ENST00000338910 LYRM9A8MSI8 78 aa12.87□□□□□ -0.35
PSPC1-201ENST00000338910 NDUFC2-KCTD14E9PQ53 114 aa12.87□□□□□ -0.35
PSPC1-201ENST00000338910 ANK2Q01484 3957 aa12.87□□□□□ -0.35
PSPC1-201ENST00000338910 LINC00959A0A1B0GUT2 108 aa12.87□□□□□ -0.35
PSPC1-201ENST00000338910 TMEM256-PLSCR3K7ERE1 68 aa12.87□□□□□ -0.35
PSPC1-201ENST00000338910 NDUFC2O95298 119 aa12.86□□□□□ -0.35
PSPC1-201ENST00000338910 ENHOQ6UWT2 76 aa12.86□□□□□ -0.35
PSPC1-201ENST00000338910 CMYA5Q8N3K9 4069 aa12.86□□□□□ -0.35
PSPC1-201ENST00000338910 C4orf26Q17RF5 130 aa12.86□□□□□ -0.35
PSPC1-201ENST00000338910 TRBV10-3A0A0K0K1G6 114 aa12.85□□□□□ -0.35
PSPC1-201ENST00000338910 KRTAP10-11P60412 298 aa12.84□□□□□ -0.35
PSPC1-201ENST00000338910 CELA1Q9UNI1 258 aa12.84□□□□□ -0.35
PSPC1-201ENST00000338910 DAD1P61803 113 aa12.83□□□□□ -0.35
PSPC1-201ENST00000338910 PRR3P79522 188 aaKnown RBP12.83□□□□□ -0.35
PSPC1-201ENST00000338910 Q8NAQ8 132 aa12.83□□□□□ -0.36
PSPC1-201ENST00000338910 Q8IZM0 81 aa12.82□□□□□ -0.36
PSPC1-201ENST00000338910 NOTCH1P46531 2555 aa12.82□□□□□ -0.36
PSPC1-201ENST00000338910 UBL5Q9BZL1 73 aa12.82□□□□□ -0.36
PSPC1-201ENST00000338910 MIFP14174 115 aa12.81□□□□□ -0.36
PSPC1-201ENST00000338910 XCL1P47992 114 aa12.8□□□□□ -0.36
PSPC1-201ENST00000338910 C20orf197Q8N268 126 aa12.8□□□□□ -0.36
PSPC1-201ENST00000338910 HRCT1Q6UXD1 115 aa12.79□□□□□ -0.36
PSPC1-201ENST00000338910 HTN3P15516 51 aa12.79□□□□□ -0.36
PSPC1-201ENST00000338910 SPART-AS1P0CW21 52 aa12.77□□□□□ -0.37
PSPC1-201ENST00000338910 EGFEM1PQ0D2K5 195 aa12.76□□□□□ -0.37
PSPC1-201ENST00000338910 CLPSL2Q6UWE3 100 aa12.76□□□□□ -0.37
PSPC1-201ENST00000338910 FAM236DA0A1B0GTK5 79 aa12.75□□□□□ -0.37
PSPC1-201ENST00000338910 FAM236CP0DP71 79 aa12.75□□□□□ -0.37
PSPC1-201ENST00000338910 Q6ZQT0 140 aa12.75□□□□□ -0.37
PSPC1-201ENST00000338910 NBEAL1Q6ZS30 2694 aa12.75□□□□□ -0.37
PSPC1-201ENST00000338910 C6orf99Q4VX62 202 aa12.74□□□□□ -0.37
PSPC1-201ENST00000338910 A0A1B0GUV1 79 aa12.74□□□□□ -0.37
PSPC1-201ENST00000338910 BCE1O60756 84 aa12.74□□□□□ -0.37
PSPC1-201ENST00000338910 EPM2AB3EWF7 344 aa12.73□□□□□ -0.37
PSPC1-201ENST00000338910 H7BZZ5 65 aa12.73□□□□□ -0.37
PSPC1-201ENST00000338910 COX17Q14061 63 aa12.73□□□□□ -0.37
PSPC1-201ENST00000338910 KIAA0087Q14695 138 aa12.73□□□□□ -0.37
PSPC1-201ENST00000338910 LINC00575Q6W349 94 aa12.72□□□□□ -0.37
PSPC1-201ENST00000338910 RETNQ9HD89 108 aa12.72□□□□□ -0.37
PSPC1-201ENST00000338910 TRAV7A0A075B6U4 112 aa12.72□□□□□ -0.37
PSPC1-201ENST00000338910 RBM3P98179 157 aaKnown RBP12.72□□□□□ -0.37
PSPC1-201ENST00000338910 Q8N3U1 123 aa12.72□□□□□ -0.37
PSPC1-201ENST00000338910 LOC110117498A0A087WWA1 95 aa12.71□□□□□ -0.37
PSPC1-201ENST00000338910 PRO0628Q9UI54 55 aa12.71□□□□□ -0.37
PSPC1-201ENST00000338910 Q8NDZ9 215 aa12.71□□□□□ -0.38
PSPC1-201ENST00000338910 TENM3Q9P273 2699 aa12.7□□□□□ -0.38
PSPC1-201ENST00000338910 LINC01547P58512 204 aaPredicted RBP12.7□□□□□ -0.38
PSPC1-201ENST00000338910 ZNF561-AS1K7EIQ3 104 aa12.69□□□□□ -0.38
PSPC1-201ENST00000338910 LINC00269Q8N2A0 174 aa12.69□□□□□ -0.38
PSPC1-201ENST00000338910 M0R2N4 97 aa12.69□□□□□ -0.38
PSPC1-201ENST00000338910 C6orf223Q8N319 242 aa12.69□□□□□ -0.38
PSPC1-201ENST00000338910 SERP1Q9Y6X1 66 aa12.68□□□□□ -0.38
PSPC1-201ENST00000338910 DNAH3Q8TD57 4116 aa12.68□□□□□ -0.38
PSPC1-201ENST00000338910 SEC61GP60059 68 aa12.68□□□□□ -0.38
PSPC1-201ENST00000338910 KLKP1Q107X0 134 aa12.68□□□□□ -0.38
PSPC1-201ENST00000338910 C9orf116Q5BN46 136 aaPredicted RBP12.68□□□□□ -0.38
PSPC1-201ENST00000338910 ANGP03950 147 aaKnown RBP12.67□□□□□ -0.38
PSPC1-201ENST00000338910 Q6ZVQ6 151 aa12.66□□□□□ -0.38
PSPC1-201ENST00000338910 LAMTOR3Q9UHA4 124 aa12.66□□□□□ -0.38
PSPC1-201ENST00000338910 MGAM2Q2M2H8 2515 aa12.65□□□□□ -0.38
PSPC1-201ENST00000338910 IGLV10-54A0A075B6I4 117 aa12.65□□□□□ -0.38
PSPC1-201ENST00000338910 CD164L2Q6UWJ8 174 aa12.65□□□□□ -0.38
PSPC1-201ENST00000338910 TRAV10A0A0B4J240 114 aa12.64□□□□□ -0.39
PSPC1-201ENST00000338910 HAMPP81172 84 aa12.64□□□□□ -0.39
PSPC1-201ENST00000338910 REG3AQ06141 175 aa12.62□□□□□ -0.39
PSPC1-201ENST00000338910 PRB2P02812 416 aaPredicted RBP12.62□□□□□ -0.39
PSPC1-201ENST00000338910 CXCL6P80162 114 aa12.61□□□□□ -0.39
PSPC1-201ENST00000338910 CHCHD10Q8WYQ3 142 aaPredicted RBP12.61□□□□□ -0.39
PSPC1-201ENST00000338910 LELP1Q5T871 98 aa12.6□□□□□ -0.39
PSPC1-201ENST00000338910 SNURFQ9Y675 71 aa12.6□□□□□ -0.39
PSPC1-201ENST00000338910 PDE6GP18545 87 aa12.59□□□□□ -0.39
PSPC1-201ENST00000338910 RMI2Q96E14 147 aa12.59□□□□□ -0.39
PSPC1-201ENST00000338910 Q6ZQY7 126 aa12.58□□□□□ -0.4
PSPC1-201ENST00000338910 IGLV6-57P01721 117 aa12.58□□□□□ -0.4
PSPC1-201ENST00000338910 Q6ZTC4 211 aa12.58□□□□□ -0.4
PSPC1-201ENST00000338910 C1orf43Q9BWL3 253 aa12.57□□□□□ -0.4
PSPC1-201ENST00000338910 F8WEM9 126 aa12.56□□□□□ -0.4
PSPC1-201ENST00000338910 KLK12Q9UKR0 248 aa12.56□□□□□ -0.4
PSPC1-201ENST00000338910 C10orf25Q5T742 122 aa12.56□□□□□ -0.4
PSPC1-201ENST00000338910 MUC7Q8TAX7 377 aa12.56□□□□□ -0.4
PSPC1-201ENST00000338910 V9GYY9 64 aa12.56□□□□□ -0.4
PSPC1-201ENST00000338910 A0A0J9YWU9 116 aa12.54□□□□□ -0.4
PSPC1-201ENST00000338910 H3BQ85 93 aa12.54□□□□□ -0.4
PSPC1-201ENST00000338910 KPRPQ5T749 579 aaPredicted RBP12.54□□□□□ -0.4
PSPC1-201ENST00000338910 LINC00336Q6ZUF6 198 aa12.54□□□□□ -0.4
PSPC1-201ENST00000338910 UNQ6190/PRO20217Q6UXQ8 127 aa12.53□□□□□ -0.4
PSPC1-201ENST00000338910 FP248Q71RG6 208 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms