RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 COX7BP24311 80 aa0.4□□□□□ -2.34
XRCC4-202ENST00000338635 RPL38P63173 70 aaKnown RBP0.4□□□□□ -2.34
XRCC4-202ENST00000338635 SPINK6Q6UWN8 80 aa0.4□□□□□ -2.34
XRCC4-202ENST00000338635 WFDC9Q8NEX5 89 aa0.4□□□□□ -2.34
XRCC4-202ENST00000338635 SPTBN2O15020 2390 aa0.4□□□□□ -2.34
XRCC4-202ENST00000338635 C2CD3Q4AC94 2353 aa0.4□□□□□ -2.34
XRCC4-202ENST00000338635 PTPN23Q9H3S7 1636 aa0.4□□□□□ -2.35
XRCC4-202ENST00000338635 CFAP74Q9C0B2 1584 aa0.4□□□□□ -2.35
XRCC4-202ENST00000338635 USF3Q68DE3 2245 aa0.4□□□□□ -2.35
XRCC4-202ENST00000338635 IFI27P40305 119 aaPredicted RBP0.4□□□□□ -2.35
XRCC4-202ENST00000338635 DEFA5Q01523 94 aa0.4□□□□□ -2.35
XRCC4-202ENST00000338635 TTC28Q96AY4 2481 aa0.4□□□□□ -2.35
XRCC4-202ENST00000338635 F8P00451 2351 aa0.4□□□□□ -2.35
XRCC4-202ENST00000338635 RGPD8O14715 1765 aaPredicted RBP0.4□□□□□ -2.35
XRCC4-202ENST00000338635 RGPD5Q99666 1765 aa0.4□□□□□ -2.35
XRCC4-202ENST00000338635 SLIT1O75093 1534 aa0.39□□□□□ -2.35
XRCC4-202ENST00000338635 Q5VSD8 79 aa0.39□□□□□ -2.35
XRCC4-202ENST00000338635 KRTAP19-3Q7Z4W3 81 aa0.39□□□□□ -2.35
XRCC4-202ENST00000338635 BIVM-ERCC5R4GMW8 1640 aa0.39□□□□□ -2.35
XRCC4-202ENST00000338635 LRRC7Q96NW7 1537 aa0.39□□□□□ -2.35
XRCC4-202ENST00000338635 FBN2P35556 2912 aa0.38□□□□□ -2.35
XRCC4-202ENST00000338635 PTPRQQ9UMZ3 2332 aa0.38□□□□□ -2.35
XRCC4-202ENST00000338635 CPSF4LA6NMK7 179 aaKnown RBP0.38□□□□□ -2.35
XRCC4-202ENST00000338635 HMGA1P17096 107 aaKnown RBP0.38□□□□□ -2.35
XRCC4-202ENST00000338635 NEBP20929 6669 aa0.38□□□□□ -2.35
XRCC4-202ENST00000338635 APCP25054 2843 aa0.38□□□□□ -2.35
XRCC4-202ENST00000338635 RGPD2P0DJD1 1756 aa0.38□□□□□ -2.35
XRCC4-202ENST00000338635 CACNA1EQ15878 2313 aa0.38□□□□□ -2.35
XRCC4-202ENST00000338635 ABCA12Q86UK0 2595 aa0.38□□□□□ -2.35
XRCC4-202ENST00000338635 CHD9Q3L8U1 2897 aa0.37□□□□□ -2.35
XRCC4-202ENST00000338635 PTPRZ1P23471 2315 aaPredicted RBP0.37□□□□□ -2.35
XRCC4-202ENST00000338635 NOTCH1P46531 2555 aa0.37□□□□□ -2.35
XRCC4-202ENST00000338635 IFI6P09912 130 aa0.37□□□□□ -2.35
XRCC4-202ENST00000338635 SPRR1BP22528 89 aa0.37□□□□□ -2.35
XRCC4-202ENST00000338635 Q5BKY6 102 aa0.37□□□□□ -2.35
XRCC4-202ENST00000338635 COL14A1Q05707 1796 aaKnown RBP0.37□□□□□ -2.35
XRCC4-202ENST00000338635 RGPD1P0DJD0 1748 aa0.37□□□□□ -2.35
XRCC4-202ENST00000338635 CCDC88BA6NC98 1476 aa0.37□□□□□ -2.35
XRCC4-202ENST00000338635 CELSR2Q9HCU4 2923 aa0.37□□□□□ -2.35
XRCC4-202ENST00000338635 BDP1A6H8Y1 2624 aa0.37□□□□□ -2.35
XRCC4-202ENST00000338635 CLIP1P30622 1438 aa0.37□□□□□ -2.35
XRCC4-202ENST00000338635 PIK3C2BO00750 1634 aa0.37□□□□□ -2.35
XRCC4-202ENST00000338635 ABCA8O94911 1581 aa0.37□□□□□ -2.35
XRCC4-202ENST00000338635 TNCP24821 2201 aa0.37□□□□□ -2.35
XRCC4-202ENST00000338635 CCL22O00626 93 aa0.36□□□□□ -2.35
XRCC4-202ENST00000338635 SPRR1AP35321 89 aa0.36□□□□□ -2.35
XRCC4-202ENST00000338635 MRPL34Q9BQ48 92 aaKnown RBP0.36□□□□□ -2.35
XRCC4-202ENST00000338635 FRAS1Q86XX4 4008 aa0.36□□□□□ -2.35
XRCC4-202ENST00000338635 ZNF469Q96JG9 3925 aaPredicted RBP0.36□□□□□ -2.35
XRCC4-202ENST00000338635 POLQO75417 2590 aa0.36□□□□□ -2.35
XRCC4-202ENST00000338635 LTN1O94822 1766 aa0.36□□□□□ -2.35
XRCC4-202ENST00000338635 ZNF292O60281 2723 aa0.36□□□□□ -2.35
XRCC4-202ENST00000338635 QSER1Q2KHR3 1735 aa0.36□□□□□ -2.35
XRCC4-202ENST00000338635 FMN2Q9NZ56 1722 aa0.36□□□□□ -2.35
XRCC4-202ENST00000338635 DUOX2Q9NRD8 1548 aa0.36□□□□□ -2.35
XRCC4-202ENST00000338635 UGGT2Q9NYU1 1516 aa0.36□□□□□ -2.35
XRCC4-202ENST00000338635 TPRP12270 2363 aaKnown RBP0.36□□□□□ -2.35
XRCC4-202ENST00000338635 H3BVH4 76 aa0.36□□□□□ -2.35
XRCC4-202ENST00000338635 SPINK4O60575 86 aa0.36□□□□□ -2.35
XRCC4-202ENST00000338635 SPINK1P00995 79 aa0.36□□□□□ -2.35
XRCC4-202ENST00000338635 PRH1P02810 166 aa0.36□□□□□ -2.35
XRCC4-202ENST00000338635 NREPQ16612 68 aa0.36□□□□□ -2.35
XRCC4-202ENST00000338635 APLNQ9ULZ1 77 aa0.36□□□□□ -2.35
XRCC4-202ENST00000338635 PKDREJQ9NTG1 2253 aa0.35□□□□□ -2.35
XRCC4-202ENST00000338635 PIEZO2Q9H5I5 2752 aa0.35□□□□□ -2.35
XRCC4-202ENST00000338635 LRRIQ1Q96JM4 1722 aa0.35□□□□□ -2.35
XRCC4-202ENST00000338635 MAGI3Q5TCQ9 1506 aa0.35□□□□□ -2.35
XRCC4-202ENST00000338635 USP32Q8NFA0 1604 aa0.35□□□□□ -2.35
XRCC4-202ENST00000338635 SCN11AQ9UI33 1791 aa0.35□□□□□ -2.35
XRCC4-202ENST00000338635 DEFB109BQ30KR1 87 aa0.35□□□□□ -2.35
XRCC4-202ENST00000338635 HEPN1Q6WQI6 88 aa0.35□□□□□ -2.35
XRCC4-202ENST00000338635 COX6B2Q6YFQ2 88 aa0.35□□□□□ -2.35
XRCC4-202ENST00000338635 DEFB105AQ8NG35 78 aa0.35□□□□□ -2.35
XRCC4-202ENST00000338635 FXYD6Q9H0Q3 95 aa0.35□□□□□ -2.35
XRCC4-202ENST00000338635 SPTBN1Q01082 2364 aaKnown RBP0.35□□□□□ -2.35
XRCC4-202ENST00000338635 ANKRD50Q9ULJ7 1429 aa0.35□□□□□ -2.35
XRCC4-202ENST00000338635 CEP170BQ9Y4F5 1589 aaPredicted RBP0.35□□□□□ -2.35
XRCC4-202ENST00000338635 ANK2Q01484 3957 aa0.35□□□□□ -2.35
XRCC4-202ENST00000338635 PPRC1Q5VV67 1664 aaKnown RBP0.35□□□□□ -2.35
XRCC4-202ENST00000338635 ARFGEF2Q9Y6D5 1785 aa0.34□□□□□ -2.35
XRCC4-202ENST00000338635 MYO5CQ9NQX4 1742 aa0.34□□□□□ -2.35
XRCC4-202ENST00000338635 LCE6AA0A183 80 aa0.34□□□□□ -2.36
XRCC4-202ENST00000338635 SMIM31A0A1B0GVY4 71 aa0.34□□□□□ -2.36
XRCC4-202ENST00000338635 KRTAP2-3P0C7H8 128 aa0.34□□□□□ -2.36
XRCC4-202ENST00000338635 SMR3AQ99954 134 aa0.34□□□□□ -2.36
XRCC4-202ENST00000338635 KRTAP2-4Q9BYR9 128 aa0.34□□□□□ -2.36
XRCC4-202ENST00000338635 KRTAP2-1Q9BYU5 128 aa0.34□□□□□ -2.36
XRCC4-202ENST00000338635 TSC2P49815 1807 aa0.34□□□□□ -2.36
XRCC4-202ENST00000338635 BCORQ6W2J9 1755 aa0.34□□□□□ -2.36
XRCC4-202ENST00000338635 CD163L1Q9NR16 1453 aa0.34□□□□□ -2.36
XRCC4-202ENST00000338635 POLR1AO95602 1720 aaPredicted RBP0.34□□□□□ -2.36
XRCC4-202ENST00000338635 AKAP6Q13023 2319 aa0.33□□□□□ -2.36
XRCC4-202ENST00000338635 CDKN2A-AS1Q9UH64 79 aa0.33□□□□□ -2.36
XRCC4-202ENST00000338635 IQGAP3Q86VI3 1631 aa0.33□□□□□ -2.36
XRCC4-202ENST00000338635 DOT1LQ8TEK3 1739 aa0.33□□□□□ -2.36
XRCC4-202ENST00000338635 ZNF831Q5JPB2 1677 aa0.33□□□□□ -2.36
XRCC4-202ENST00000338635 NDUFA4O00483 81 aa0.32□□□□□ -2.36
XRCC4-202ENST00000338635 ATXN8Q156A1 80 aa0.32□□□□□ -2.36
XRCC4-202ENST00000338635 GNG13Q9P2W3 67 aa0.32□□□□□ -2.36
XRCC4-202ENST00000338635 U3KQA8 63 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms