RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 SLC25A20O43772 301 aa10.71□□□□□ -0.69
HPS1-202ENST00000338546 OR13C6PQ8NH95 151 aa10.71□□□□□ -0.69
HPS1-202ENST00000338546 SMIM11BQ8TCY0 68 aa10.71□□□□□ -0.69
HPS1-202ENST00000338546 DNAH1Q9P2D7 4330 aa10.71□□□□□ -0.7
HPS1-202ENST00000338546 C9JAW5 83 aa10.7□□□□□ -0.7
HPS1-202ENST00000338546 TRACP01848 142 aa10.7□□□□□ -0.7
HPS1-202ENST00000338546 CARD19Q96LW7 228 aa10.7□□□□□ -0.7
HPS1-202ENST00000338546 USP17L23D6RBM5 183 aa10.69□□□□□ -0.7
HPS1-202ENST00000338546 TLX1NBP0CAT3 122 aa10.69□□□□□ -0.7
HPS1-202ENST00000338546 CLEC2BQ92478 149 aa10.69□□□□□ -0.7
HPS1-202ENST00000338546 H3BT86 120 aa10.69□□□□□ -0.7
HPS1-202ENST00000338546 ETDBQ3ZM63 59 aa10.69□□□□□ -0.7
HPS1-202ENST00000338546 TTC32Q5I0X7 151 aa10.69□□□□□ -0.7
HPS1-202ENST00000338546 MTURNQ8N3F0 131 aa10.68□□□□□ -0.7
HPS1-202ENST00000338546 ANKRD29Q8N6D5 301 aa10.68□□□□□ -0.7
HPS1-202ENST00000338546 TEN1Q86WV5 123 aa10.67□□□□□ -0.7
HPS1-202ENST00000338546 PRKDCP78527 4128 aaKnown RBP10.67□□□□□ -0.7
HPS1-202ENST00000338546 J3QR89 54 aa10.66□□□□□ -0.7
HPS1-202ENST00000338546 PRR3P79522 188 aaKnown RBP10.65□□□□□ -0.7
HPS1-202ENST00000338546 S100A7L2Q5SY68 101 aa10.65□□□□□ -0.7
HPS1-202ENST00000338546 DNAH7Q8WXX0 4024 aa10.65□□□□□ -0.7
HPS1-202ENST00000338546 IGLV6-57P01721 117 aa10.65□□□□□ -0.71
HPS1-202ENST00000338546 Q8NDZ9 215 aa10.65□□□□□ -0.71
HPS1-202ENST00000338546 KRTAP1-5Q9BYS1 174 aa10.65□□□□□ -0.71
HPS1-202ENST00000338546 A0A1B0GX51 115 aa10.64□□□□□ -0.71
HPS1-202ENST00000338546 CASC10Q5T4H9 136 aa10.64□□□□□ -0.71
HPS1-202ENST00000338546 CBY1Q9Y3M2 126 aa10.64□□□□□ -0.71
HPS1-202ENST00000338546 NCR3O14931 201 aa10.63□□□□□ -0.71
HPS1-202ENST00000338546 XAGE1AQ9HD64 81 aa10.63□□□□□ -0.71
HPS1-202ENST00000338546 NBDYA0A0U1RRE5 68 aa10.62□□□□□ -0.71
HPS1-202ENST00000338546 VPREB1P12018 145 aa10.62□□□□□ -0.71
HPS1-202ENST00000338546 C14orf177Q52M58 125 aa10.62□□□□□ -0.71
HPS1-202ENST00000338546 Q6ZRP5 223 aa10.62□□□□□ -0.71
HPS1-202ENST00000338546 PPDPFLQ8WWR9 84 aa10.62□□□□□ -0.71
HPS1-202ENST00000338546 SLPIP03973 132 aa10.61□□□□□ -0.71
HPS1-202ENST00000338546 PLA2G2DQ9UNK4 145 aa10.61□□□□□ -0.71
HPS1-202ENST00000338546 M0R378 163 aa10.6□□□□□ -0.71
HPS1-202ENST00000338546 RPL18AQ02543 176 aaKnown RBP10.6□□□□□ -0.71
HPS1-202ENST00000338546 FAM218AQ96MZ4 157 aa10.6□□□□□ -0.71
HPS1-202ENST00000338546 MEGF8Q7Z7M0 2845 aa10.6□□□□□ -0.71
HPS1-202ENST00000338546 PSCAO43653 123 aa10.6□□□□□ -0.71
HPS1-202ENST00000338546 PLECQ15149 4684 aaKnown RBP10.59□□□□□ -0.71
HPS1-202ENST00000338546 GAGE2EQ4V326 116 aa10.59□□□□□ -0.71
HPS1-202ENST00000338546 GAGE2DQ9UEU5 116 aa10.59□□□□□ -0.71
HPS1-202ENST00000338546 SNCGO76070 127 aa10.58□□□□□ -0.72
HPS1-202ENST00000338546 DNAL4O96015 105 aa10.58□□□□□ -0.72
HPS1-202ENST00000338546 CNBPP62633 177 aaKnown RBP10.58□□□□□ -0.72
HPS1-202ENST00000338546 CSMD3Q7Z407 3707 aa10.58□□□□□ -0.72
HPS1-202ENST00000338546 LOC107984640A0A0U1RRK4 108 aa10.56□□□□□ -0.72
HPS1-202ENST00000338546 C9orf129Q5T035 196 aaKnown RBP10.56□□□□□ -0.72
HPS1-202ENST00000338546 TRBV7-6A0A0J9YX20 115 aa10.56□□□□□ -0.72
HPS1-202ENST00000338546 C6orf99Q4VX62 202 aa10.56□□□□□ -0.72
HPS1-202ENST00000338546 IGLV5-37A0A075B6J1 123 aa10.55□□□□□ -0.72
HPS1-202ENST00000338546 TRAV23DV6A0A075B6W5 121 aa10.55□□□□□ -0.72
HPS1-202ENST00000338546 A0A087WYN8 130 aa10.55□□□□□ -0.72
HPS1-202ENST00000338546 TRBV10-3A0A0K0K1G6 114 aa10.55□□□□□ -0.72
HPS1-202ENST00000338546 BAALC-AS2P0C853 105 aa10.55□□□□□ -0.72
HPS1-202ENST00000338546 LINC00167Q96N53 147 aa10.55□□□□□ -0.72
HPS1-202ENST00000338546 LECT2O14960 151 aa10.54□□□□□ -0.72
HPS1-202ENST00000338546 PKIGQ9Y2B9 76 aa10.53□□□□□ -0.72
HPS1-202ENST00000338546 Q8N814 137 aa10.52□□□□□ -0.72
HPS1-202ENST00000338546 DIRC1Q969H9 104 aa10.52□□□□□ -0.72
HPS1-202ENST00000338546 VPS13DQ5THJ4 4388 aa10.52□□□□□ -0.73
HPS1-202ENST00000338546 NKAPP1Q8N9T2 125 aa10.52□□□□□ -0.73
HPS1-202ENST00000338546 STARD9Q9P2P6 4700 aa10.51□□□□□ -0.73
HPS1-202ENST00000338546 ZNF73O43830 326 aaPredicted RBP10.51□□□□□ -0.73
HPS1-202ENST00000338546 LINC00575Q6W349 94 aa10.51□□□□□ -0.73
HPS1-202ENST00000338546 Q6ZRN7 208 aaPredicted RBP10.51□□□□□ -0.73
HPS1-202ENST00000338546 KRTAP3-3Q9BYR6 98 aa10.51□□□□□ -0.73
HPS1-202ENST00000338546 KRTAP3-2Q9BYR7 98 aa10.51□□□□□ -0.73
HPS1-202ENST00000338546 LYSTQ99698 3801 aa10.5□□□□□ -0.73
HPS1-202ENST00000338546 VPS25Q9BRG1 176 aa10.5□□□□□ -0.73
HPS1-202ENST00000338546 ORMDL1Q9P0S3 153 aa10.5□□□□□ -0.73
HPS1-202ENST00000338546 TEX49A0A1B0GTD5 131 aa10.49□□□□□ -0.73
HPS1-202ENST00000338546 LRCOL1A6NCL2 159 aa10.49□□□□□ -0.73
HPS1-202ENST00000338546 H3BQ85 93 aa10.48□□□□□ -0.73
HPS1-202ENST00000338546 GAGE2BQ13066 116 aa10.48□□□□□ -0.73
HPS1-202ENST00000338546 KCNQ1DNQ9H478 68 aa10.48□□□□□ -0.73
HPS1-202ENST00000338546 C16orf90A8MZG2 172 aa10.48□□□□□ -0.73
HPS1-202ENST00000338546 SERTAD4-AS1Q5TG53 156 aa10.48□□□□□ -0.73
HPS1-202ENST00000338546 hADV29S1A0JD25 119 aa10.47□□□□□ -0.73
HPS1-202ENST00000338546 WWC2-AS2Q96NR7 200 aa10.47□□□□□ -0.73
HPS1-202ENST00000338546 COX7BP24311 80 aa10.46□□□□□ -0.74
HPS1-202ENST00000338546 ELOF1P60002 83 aaKnown RBP10.46□□□□□ -0.74
HPS1-202ENST00000338546 Q6ZR54 194 aa10.46□□□□□ -0.74
HPS1-202ENST00000338546 C7orf33Q8WU49 177 aa10.46□□□□□ -0.74
HPS1-202ENST00000338546 C22orf24Q9Y442 160 aa10.46□□□□□ -0.74
HPS1-202ENST00000338546 TMEM256-PLSCR3K7ERE1 68 aa10.45□□□□□ -0.74
HPS1-202ENST00000338546 GHRHP01286 108 aa10.45□□□□□ -0.74
HPS1-202ENST00000338546 INAFM2P0DMQ5 153 aa10.45□□□□□ -0.74
HPS1-202ENST00000338546 TENM2Q9NT68 2774 aa10.44□□□□□ -0.74
HPS1-202ENST00000338546 C9orf163Q8N9P6 203 aa10.43□□□□□ -0.74
HPS1-202ENST00000338546 PRYO14603 147 aa10.43□□□□□ -0.74
HPS1-202ENST00000338546 OBSCN-AS1Q96MR7 158 aa10.43□□□□□ -0.74
HPS1-202ENST00000338546 DNAH10Q8IVF4 4471 aa10.41□□□□□ -0.74
HPS1-202ENST00000338546 IGLV1-50A0A075B6I6 118 aa10.41□□□□□ -0.74
HPS1-202ENST00000338546 FAM240AA0A1B0GVK7 77 aa10.41□□□□□ -0.74
HPS1-202ENST00000338546 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.41□□□□□ -0.74
HPS1-202ENST00000338546 MRPL55Q7Z7F7 128 aaKnown RBP10.41□□□□□ -0.74
HPS1-202ENST00000338546 FAM168BA1KXE4 195 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms