RNA–Protein interactions for RNA: ENST00000336665.9

AGAP1-202, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AGAP1, Length 5,427 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP1-202ENST00000336665 LINC00846Q9NV44 126 aa17.77■□□□□ 0.43
AGAP1-202ENST00000336665 ZNF462Q96JM2 2506 aa17.76■□□□□ 0.43
AGAP1-202ENST00000336665 PMAIP1Q13794 54 aa17.76■□□□□ 0.43
AGAP1-202ENST00000336665 A0A1B0GW54 56 aa17.75■□□□□ 0.43
AGAP1-202ENST00000336665 TYMSOSQ8TAI1 123 aa17.75■□□□□ 0.43
AGAP1-202ENST00000336665 Q8NBF4 154 aa17.75■□□□□ 0.43
AGAP1-202ENST00000336665 FAM19A4Q96LR4 140 aa17.75■□□□□ 0.43
AGAP1-202ENST00000336665 PLA2G1BP04054 148 aaKnown RBP17.72■□□□□ 0.43
AGAP1-202ENST00000336665 SPATA3Q8NHX4 192 aa17.7■□□□□ 0.42
AGAP1-202ENST00000336665 CPAMD8Q8IZJ3 1885 aa17.7■□□□□ 0.42
AGAP1-202ENST00000336665 PHF5AQ7RTV0 110 aaKnown RBP17.69■□□□□ 0.42
AGAP1-202ENST00000336665 J3QL48 77 aa17.67■□□□□ 0.42
AGAP1-202ENST00000336665 TET2Q6N021 2002 aaPredicted RBP17.67■□□□□ 0.42
AGAP1-202ENST00000336665 MUC4Q99102 2169 aa17.67■□□□□ 0.42
AGAP1-202ENST00000336665 PSPHP1O15172 72 aa17.66■□□□□ 0.42
AGAP1-202ENST00000336665 LINC01546A6NGU7 62 aa17.66■□□□□ 0.42
AGAP1-202ENST00000336665 ELOF1P60002 83 aaKnown RBP17.65■□□□□ 0.42
AGAP1-202ENST00000336665 LINC00588Q9Y4M8 146 aa17.65■□□□□ 0.42
AGAP1-202ENST00000336665 ACYP2P14621 99 aa17.65■□□□□ 0.42
AGAP1-202ENST00000336665 SMIM29Q86T20 159 aa17.64■□□□□ 0.41
AGAP1-202ENST00000336665 IGLV5-45A0A087WSX0 123 aa17.64■□□□□ 0.41
AGAP1-202ENST00000336665 Q8NAQ8 132 aa17.63■□□□□ 0.41
AGAP1-202ENST00000336665 Q6ZRX8 168 aa17.63■□□□□ 0.41
AGAP1-202ENST00000336665 EPM2AB3EWF7 344 aa17.62■□□□□ 0.41
AGAP1-202ENST00000336665 LINC00313P59037 77 aa17.62■□□□□ 0.41
AGAP1-202ENST00000336665 A0A1B0GU69 56 aa17.6■□□□□ 0.41
AGAP1-202ENST00000336665 GVQW2A0A096LPI5 108 aaPredicted RBP17.58■□□□□ 0.4
AGAP1-202ENST00000336665 LINC00476Q8WZB0 136 aa17.57■□□□□ 0.4
AGAP1-202ENST00000336665 ANKRD11Q6UB99 2663 aaPredicted RBP17.57■□□□□ 0.4
AGAP1-202ENST00000336665 BCE1O60756 84 aa17.57■□□□□ 0.4
AGAP1-202ENST00000336665 ATP11AUNQ6ZP68 121 aa17.56■□□□□ 0.4
AGAP1-202ENST00000336665 USP9YO00507 2555 aaPredicted RBP17.54■□□□□ 0.4
AGAP1-202ENST00000336665 CHTF8P0CG12 524 aa17.54■□□□□ 0.4
AGAP1-202ENST00000336665 RPL37AP61513 92 aaKnown RBP17.53■□□□□ 0.4
AGAP1-202ENST00000336665 SETD2Q9BYW2 2564 aaPredicted RBP17.53■□□□□ 0.4
AGAP1-202ENST00000336665 H3BPC8 53 aa17.52■□□□□ 0.4
AGAP1-202ENST00000336665 CEP295Q9C0D2 2601 aa17.52■□□□□ 0.39
AGAP1-202ENST00000336665 PKD1L2Q7Z442 2459 aa17.51■□□□□ 0.39
AGAP1-202ENST00000336665 DNAH10OSP0CZ25 163 aa17.5■□□□□ 0.39
AGAP1-202ENST00000336665 Q9UF83 564 aa17.46■□□□□ 0.39
AGAP1-202ENST00000336665 Q96NJ1 140 aa17.45■□□□□ 0.38
AGAP1-202ENST00000336665 COL4A2P08572 1712 aa17.44■□□□□ 0.38
AGAP1-202ENST00000336665 C8orf87E5RJ46 101 aa17.43■□□□□ 0.38
AGAP1-202ENST00000336665 LOC110117498A0A087WWA1 95 aa17.42■□□□□ 0.38
AGAP1-202ENST00000336665 TRAV22A0A0B4J277 110 aa17.41■□□□□ 0.38
AGAP1-202ENST00000336665 ST20-AS1Q8NBB2 130 aa17.4■□□□□ 0.38
AGAP1-202ENST00000336665 Q6ZQT0 140 aa17.39■□□□□ 0.37
AGAP1-202ENST00000336665 FASNP49327 2511 aaKnown RBP17.39■□□□□ 0.37
AGAP1-202ENST00000336665 COX6B2Q6YFQ2 88 aa17.37■□□□□ 0.37
AGAP1-202ENST00000336665 FAM218AQ96MZ4 157 aa17.35■□□□□ 0.37
AGAP1-202ENST00000336665 MTORP42345 2549 aa17.33■□□□□ 0.36
AGAP1-202ENST00000336665 TRBV7-4A0A0J9YYF1 115 aa17.33■□□□□ 0.36
AGAP1-202ENST00000336665 LOC101927531A0A1B0GV80 90 aa17.32■□□□□ 0.36
AGAP1-202ENST00000336665 KLK9Q2XQG4 91 aa17.32■□□□□ 0.36
AGAP1-202ENST00000336665 SPAG11AQ6PDA7 123 aa17.29■□□□□ 0.36
AGAP1-202ENST00000336665 K7EIL1 84 aa17.29■□□□□ 0.36
AGAP1-202ENST00000336665 VPREB1P12018 145 aa17.29■□□□□ 0.36
AGAP1-202ENST00000336665 F8P00451 2351 aa17.28■□□□□ 0.36
AGAP1-202ENST00000336665 PTPRBP23467 1997 aa17.28■□□□□ 0.36
AGAP1-202ENST00000336665 CDIP1Q9H305 208 aa17.27■□□□□ 0.36
AGAP1-202ENST00000336665 SPTBN4Q9H254 2564 aa17.26■□□□□ 0.35
AGAP1-202ENST00000336665 A8MWP4 228 aa17.24■□□□□ 0.35
AGAP1-202ENST00000336665 IGLV6-57P01721 117 aa17.22■□□□□ 0.35
AGAP1-202ENST00000336665 MRPL34Q9BQ48 92 aaKnown RBP17.22■□□□□ 0.35
AGAP1-202ENST00000336665 LINC00304Q8N9R0 145 aa17.22■□□□□ 0.35
AGAP1-202ENST00000336665 IGLV1-50A0A075B6I6 118 aa17.21■□□□□ 0.35
AGAP1-202ENST00000336665 FAM168BA1KXE4 195 aa17.2■□□□□ 0.34
AGAP1-202ENST00000336665 C19orf73Q9NVV2 129 aa17.19■□□□□ 0.34
AGAP1-202ENST00000336665 SSBP3-AS1Q7Z2R9 100 aa17.18■□□□□ 0.34
AGAP1-202ENST00000336665 KRTAP10-11P60412 298 aa17.18■□□□□ 0.34
AGAP1-202ENST00000336665 COL27A1Q8IZC6 1860 aaPredicted RBP17.17■□□□□ 0.34
AGAP1-202ENST00000336665 CSNK1G2-AS1Q8NCQ2 148 aa17.17■□□□□ 0.34
AGAP1-202ENST00000336665 KCNQ1DNQ9H478 68 aa17.16■□□□□ 0.34
AGAP1-202ENST00000336665 SERTAD4-AS1Q5TG53 156 aa17.15■□□□□ 0.34
AGAP1-202ENST00000336665 LINC00336Q6ZUF6 198 aa17.14■□□□□ 0.33
AGAP1-202ENST00000336665 SMCPP49901 116 aaPredicted RBP17.14■□□□□ 0.33
AGAP1-202ENST00000336665 ZNF861PO60384 105 aa17.13■□□□□ 0.33
AGAP1-202ENST00000336665 POLQO75417 2590 aa17.12■□□□□ 0.33
AGAP1-202ENST00000336665 A0A087WTM6 91 aa17.1■□□□□ 0.33
AGAP1-202ENST00000336665 IGLV8-61A0A075B6I0 122 aa17.08■□□□□ 0.33
AGAP1-202ENST00000336665 ANKRD17O75179 2603 aaKnown RBP17.08■□□□□ 0.33
AGAP1-202ENST00000336665 PRR34Q9NV39 138 aa17.06■□□□□ 0.32
AGAP1-202ENST00000336665 WDR87Q6ZQQ6 2873 aa17.05■□□□□ 0.32
AGAP1-202ENST00000336665 TM2D3Q9BRN9 247 aa17.05■□□□□ 0.32
AGAP1-202ENST00000336665 ACANP16112 2415 aa17.04■□□□□ 0.32
AGAP1-202ENST00000336665 PRO0461Q9UI25 63 aa17.04■□□□□ 0.32
AGAP1-202ENST00000336665 LINC00528Q8N1L1 170 aa17.03■□□□□ 0.32
AGAP1-202ENST00000336665 LITAFQ99732 161 aa17.02■□□□□ 0.31
AGAP1-202ENST00000336665 K7EQZ3 153 aa17.02■□□□□ 0.31
AGAP1-202ENST00000336665 C9orf163Q8N9P6 203 aa17.01■□□□□ 0.31
AGAP1-202ENST00000336665 DSCR10P59022 87 aa17.01■□□□□ 0.31
AGAP1-202ENST00000336665 PRO0628Q9UI54 55 aa17■□□□□ 0.31
AGAP1-202ENST00000336665 IGFL1Q6UW32 110 aa16.99■□□□□ 0.31
AGAP1-202ENST00000336665 C15orf56Q8N910 161 aa16.99■□□□□ 0.31
AGAP1-202ENST00000336665 LINC01600Q96MT4 127 aa16.99■□□□□ 0.31
AGAP1-202ENST00000336665 C8orf17Q9NRJ1 99 aa16.98■□□□□ 0.31
AGAP1-202ENST00000336665 SMR3BP02814 79 aaPredicted RBP16.97■□□□□ 0.31
AGAP1-202ENST00000336665 OBSCN-AS1Q96MR7 158 aa16.96■□□□□ 0.31
AGAP1-202ENST00000336665 A0A096LNT2 108 aa16.95■□□□□ 0.3
AGAP1-202ENST00000336665 TLX1NBP0CAT3 122 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms