RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 PRLHP81277 87 aa8.93□□□□□ -0.98
VSTM4-202ENST00000332853 COX7CP15954 63 aa8.93□□□□□ -0.98
VSTM4-202ENST00000332853 PRR4Q16378 134 aa8.93□□□□□ -0.98
VSTM4-202ENST00000332853 KRTAP10-3P60369 221 aa8.93□□□□□ -0.98
VSTM4-202ENST00000332853 LINC01556Q5JQF7 62 aa8.93□□□□□ -0.98
VSTM4-202ENST00000332853 DEFB116Q30KQ4 102 aa8.92□□□□□ -0.98
VSTM4-202ENST00000332853 SVIPQ8NHG7 77 aa8.92□□□□□ -0.98
VSTM4-202ENST00000332853 LINC00846Q9NV44 126 aa8.92□□□□□ -0.98
VSTM4-202ENST00000332853 C22orf24Q9Y442 160 aa8.92□□□□□ -0.98
VSTM4-202ENST00000332853 VPS13AQ96RL7 3174 aa8.91□□□□□ -0.98
VSTM4-202ENST00000332853 FAM19A3Q7Z5A8 133 aa8.91□□□□□ -0.98
VSTM4-202ENST00000332853 CSNK1G2-AS1Q8NCQ2 148 aa8.9□□□□□ -0.98
VSTM4-202ENST00000332853 Q9BRP9 147 aa8.9□□□□□ -0.98
VSTM4-202ENST00000332853 SPTBN5Q9NRC6 3674 aaKnown RBP8.9□□□□□ -0.98
VSTM4-202ENST00000332853 CDIP1Q9H305 208 aa8.9□□□□□ -0.98
VSTM4-202ENST00000332853 Q6Q795 121 aa8.9□□□□□ -0.99
VSTM4-202ENST00000332853 PRYO14603 147 aa8.89□□□□□ -0.99
VSTM4-202ENST00000332853 CIRBP-AS1Q8TBR5 109 aa8.89□□□□□ -0.99
VSTM4-202ENST00000332853 MDFIQ99750 246 aa8.89□□□□□ -0.99
VSTM4-202ENST00000332853 F8WDY8 70 aa8.88□□□□□ -0.99
VSTM4-202ENST00000332853 KRTAP1-3Q8IUG1 177 aa8.88□□□□□ -0.99
VSTM4-202ENST00000332853 C1orf134Q5TEV5 83 aa8.88□□□□□ -0.99
VSTM4-202ENST00000332853 PRO0461Q9UI25 63 aa8.88□□□□□ -0.99
VSTM4-202ENST00000332853 LITAFQ99732 161 aa8.86□□□□□ -0.99
VSTM4-202ENST00000332853 GIG44P09565 113 aaPredicted RBP8.86□□□□□ -0.99
VSTM4-202ENST00000332853 Q6ZVQ6 151 aa8.85□□□□□ -0.99
VSTM4-202ENST00000332853 BRK1Q8WUW1 75 aa8.85□□□□□ -0.99
VSTM4-202ENST00000332853 A0A087WSZ3 146 aa8.85□□□□□ -0.99
VSTM4-202ENST00000332853 KRTAP10-11P60412 298 aa8.85□□□□□ -0.99
VSTM4-202ENST00000332853 KIAA0087Q14695 138 aa8.84□□□□□ -0.99
VSTM4-202ENST00000332853 LINC00588Q9Y4M8 146 aa8.84□□□□□ -0.99
VSTM4-202ENST00000332853 LINC00167Q96N53 147 aa8.84□□□□□ -0.99
VSTM4-202ENST00000332853 Q8N9L7 120 aa8.84□□□□□ -0.99
VSTM4-202ENST00000332853 K7ERS5 55 aa8.84□□□□□ -0.99
VSTM4-202ENST00000332853 SMCR5Q8TEV8 140 aa8.83□□□□□ -1
VSTM4-202ENST00000332853 H3BNG1 76 aa8.83□□□□□ -1
VSTM4-202ENST00000332853 NHLRC4P0CG21 123 aaPredicted RBP8.82□□□□□ -1
VSTM4-202ENST00000332853 C19orf73Q9NVV2 129 aa8.82□□□□□ -1
VSTM4-202ENST00000332853 EIF4EBP3O60516 100 aaPredicted RBP8.82□□□□□ -1
VSTM4-202ENST00000332853 IGHV6-1A0A0B4J1U7 121 aa8.82□□□□□ -1
VSTM4-202ENST00000332853 LINC01547P58512 204 aaPredicted RBP8.82□□□□□ -1
VSTM4-202ENST00000332853 TRAV7A0A075B6U4 112 aa8.81□□□□□ -1
VSTM4-202ENST00000332853 SPTSSBQ8NFR3 76 aa8.81□□□□□ -1
VSTM4-202ENST00000332853 SPATA3Q8NHX4 192 aa8.8□□□□□ -1
VSTM4-202ENST00000332853 NDUFC1O43677 76 aa8.79□□□□□ -1
VSTM4-202ENST00000332853 RETNLBQ9BQ08 111 aa8.79□□□□□ -1
VSTM4-202ENST00000332853 HECTD1Q9ULT8 2610 aa8.79□□□□□ -1
VSTM4-202ENST00000332853 AKAP13Q12802 2813 aa8.79□□□□□ -1
VSTM4-202ENST00000332853 EYSQ5T1H1 3165 aa8.78□□□□□ -1
VSTM4-202ENST00000332853 KRTAP1-1Q07627 177 aa8.78□□□□□ -1
VSTM4-202ENST00000332853 PHF5AQ7RTV0 110 aaKnown RBP8.78□□□□□ -1
VSTM4-202ENST00000332853 F8P00451 2351 aa8.78□□□□□ -1
VSTM4-202ENST00000332853 LINC00208Q96KT6 92 aa8.77□□□□□ -1
VSTM4-202ENST00000332853 Q6ZRP5 223 aa8.77□□□□□ -1.01
VSTM4-202ENST00000332853 ELOF1P60002 83 aaKnown RBP8.77□□□□□ -1.01
VSTM4-202ENST00000332853 SPEGQ15772 3267 aa8.76□□□□□ -1.01
VSTM4-202ENST00000332853 FAM168BA1KXE4 195 aa8.76□□□□□ -1.01
VSTM4-202ENST00000332853 ZNF575Q86XF7 245 aa8.76□□□□□ -1.01
VSTM4-202ENST00000332853 ST20-AS1Q8NBB2 130 aa8.75□□□□□ -1.01
VSTM4-202ENST00000332853 CHTF8P0CG12 524 aa8.74□□□□□ -1.01
VSTM4-202ENST00000332853 TRBV7-7A0A0K0K1E9 115 aa8.74□□□□□ -1.01
VSTM4-202ENST00000332853 PRR15LQ9BU68 103 aa8.73□□□□□ -1.01
VSTM4-202ENST00000332853 ZNF292O60281 2723 aa8.73□□□□□ -1.01
VSTM4-202ENST00000332853 COL6A3P12111 3177 aa8.73□□□□□ -1.01
VSTM4-202ENST00000332853 ATP5EP56381 51 aaPredicted RBP8.72□□□□□ -1.01
VSTM4-202ENST00000332853 GVQW2A0A096LPI5 108 aaPredicted RBP8.72□□□□□ -1.01
VSTM4-202ENST00000332853 K7EIL1 84 aa8.72□□□□□ -1.01
VSTM4-202ENST00000332853 NBDYA0A0U1RRE5 68 aa8.71□□□□□ -1.02
VSTM4-202ENST00000332853 PCOTHQ58A44 107 aa8.71□□□□□ -1.02
VSTM4-202ENST00000332853 DNAH10OSP0CZ25 163 aa8.7□□□□□ -1.02
VSTM4-202ENST00000332853 Q6ZQT0 140 aa8.7□□□□□ -1.02
VSTM4-202ENST00000332853 SERTAD4-AS1Q5TG53 156 aa8.7□□□□□ -1.02
VSTM4-202ENST00000332853 Q6ZRX8 168 aa8.7□□□□□ -1.02
VSTM4-202ENST00000332853 A0A0U1RQV1 116 aa8.7□□□□□ -1.02
VSTM4-202ENST00000332853 HCG22E2RYF7 251 aa8.7□□□□□ -1.02
VSTM4-202ENST00000332853 FLNAP21333 2647 aaKnown RBP8.69□□□□□ -1.02
VSTM4-202ENST00000332853 CXCL6P80162 114 aa8.69□□□□□ -1.02
VSTM4-202ENST00000332853 SMIM29Q86T20 159 aa8.69□□□□□ -1.02
VSTM4-202ENST00000332853 SERP1Q9Y6X1 66 aa8.69□□□□□ -1.02
VSTM4-202ENST00000332853 VPREB1P12018 145 aa8.69□□□□□ -1.02
VSTM4-202ENST00000332853 TRBV7-6A0A0J9YX20 115 aa8.68□□□□□ -1.02
VSTM4-202ENST00000332853 RTL8CO15255 209 aa8.68□□□□□ -1.02
VSTM4-202ENST00000332853 MOBPQ13875 183 aa8.68□□□□□ -1.02
VSTM4-202ENST00000332853 C16orf90A8MZG2 172 aa8.68□□□□□ -1.02
VSTM4-202ENST00000332853 IGLV6-57P01721 117 aa8.67□□□□□ -1.02
VSTM4-202ENST00000332853 H0Y9P7 68 aa8.67□□□□□ -1.02
VSTM4-202ENST00000332853 EPM2AB3EWF7 344 aa8.67□□□□□ -1.02
VSTM4-202ENST00000332853 ITPR3Q14573 2671 aa8.66□□□□□ -1.02
VSTM4-202ENST00000332853 LINC00612Q8N6U2 182 aa8.66□□□□□ -1.02
VSTM4-202ENST00000332853 TMEM254Q8TBM7 123 aa8.66□□□□□ -1.02
VSTM4-202ENST00000332853 LINC00476Q8WZB0 136 aa8.66□□□□□ -1.02
VSTM4-202ENST00000332853 CENPEQ02224 2701 aa8.66□□□□□ -1.02
VSTM4-202ENST00000332853 C15orf56Q8N910 161 aa8.65□□□□□ -1.02
VSTM4-202ENST00000332853 CR1P17927 2039 aa8.65□□□□□ -1.02
VSTM4-202ENST00000332853 MYO15AQ9UKN7 3530 aa8.65□□□□□ -1.02
VSTM4-202ENST00000332853 REV3LO60673 3130 aa8.64□□□□□ -1.03
VSTM4-202ENST00000332853 PRR34Q9NV39 138 aa8.64□□□□□ -1.03
VSTM4-202ENST00000332853 FRYQ5TBA9 3013 aa8.64□□□□□ -1.03
VSTM4-202ENST00000332853 FLNBO75369 2602 aaKnown RBP8.63□□□□□ -1.03
VSTM4-202ENST00000332853 LOC110117498A0A087WWA1 95 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms