RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 F8P00451 2351 aa14.19□□□□□ -0.14
CMTM4-201ENST00000330687 LINC00575Q6W349 94 aa14.19□□□□□ -0.14
CMTM4-201ENST00000330687 ANGP03950 147 aaKnown RBP14.19□□□□□ -0.14
CMTM4-201ENST00000330687 XAGE1AQ9HD64 81 aa14.19□□□□□ -0.14
CMTM4-201ENST00000330687 TMEM254Q8TBM7 123 aa14.18□□□□□ -0.14
CMTM4-201ENST00000330687 C6orf223Q8N319 242 aa14.18□□□□□ -0.14
CMTM4-201ENST00000330687 BPY2O14599 106 aa14.17□□□□□ -0.14
CMTM4-201ENST00000330687 SEC61GP60059 68 aa14.15□□□□□ -0.14
CMTM4-201ENST00000330687 IGHV4-28A0A0C4DH34 117 aa14.14□□□□□ -0.15
CMTM4-201ENST00000330687 CELA1Q9UNI1 258 aa14.14□□□□□ -0.15
CMTM4-201ENST00000330687 UNQ6190/PRO20217Q6UXQ8 127 aa14.13□□□□□ -0.15
CMTM4-201ENST00000330687 Q8IZM0 81 aa14.13□□□□□ -0.15
CMTM4-201ENST00000330687 MUC7Q8TAX7 377 aa14.13□□□□□ -0.15
CMTM4-201ENST00000330687 PRR4Q16378 134 aa14.13□□□□□ -0.15
CMTM4-201ENST00000330687 C3orf84H3BNL1 204 aa14.12□□□□□ -0.15
CMTM4-201ENST00000330687 LINC01006Q8NI28 216 aa14.12□□□□□ -0.15
CMTM4-201ENST00000330687 C10orf25Q5T742 122 aa14.11□□□□□ -0.15
CMTM4-201ENST00000330687 LINC00167Q96N53 147 aa14.11□□□□□ -0.15
CMTM4-201ENST00000330687 DEFB4AO15263 64 aa14.11□□□□□ -0.15
CMTM4-201ENST00000330687 FUSP35637 526 aaKnown RBP eCLIP14.11□□□□□ -0.15
CMTM4-201ENST00000330687 DOPEY1Q5JWR5 2465 aa14.11□□□□□ -0.15
CMTM4-201ENST00000330687 CHCHD10Q8WYQ3 142 aaPredicted RBP14.11□□□□□ -0.15
CMTM4-201ENST00000330687 C16orf74Q96GX8 76 aa14.1□□□□□ -0.15
CMTM4-201ENST00000330687 IGSF10Q6WRI0 2623 aa14.1□□□□□ -0.15
CMTM4-201ENST00000330687 HIGD2AQ9BW72 106 aa14.1□□□□□ -0.15
CMTM4-201ENST00000330687 LINC01356Q8N9X3 169 aa14.09□□□□□ -0.15
CMTM4-201ENST00000330687 DEFB105AQ8NG35 78 aa14.08□□□□□ -0.16
CMTM4-201ENST00000330687 HTN3P15516 51 aa14.06□□□□□ -0.16
CMTM4-201ENST00000330687 IL17DQ8TAD2 202 aa14.06□□□□□ -0.16
CMTM4-201ENST00000330687 BBC3Q96PG8 261 aaPredicted RBP14.06□□□□□ -0.16
CMTM4-201ENST00000330687 NDUFC1O43677 76 aa14.05□□□□□ -0.16
CMTM4-201ENST00000330687 C4orf3Q8WVX3 66 aa14.05□□□□□ -0.16
CMTM4-201ENST00000330687 TRBV7-4A0A0J9YYF1 115 aa14.05□□□□□ -0.16
CMTM4-201ENST00000330687 EPM2AB3EWF7 344 aa14.05□□□□□ -0.16
CMTM4-201ENST00000330687 SPAG11BQ08648 103 aa14.05□□□□□ -0.16
CMTM4-201ENST00000330687 FAM30AQ9NZY2 134 aa14.04□□□□□ -0.16
CMTM4-201ENST00000330687 PRYO14603 147 aa14.03□□□□□ -0.16
CMTM4-201ENST00000330687 FASNP49327 2511 aaKnown RBP14.03□□□□□ -0.16
CMTM4-201ENST00000330687 PLAC8L1A1L4L8 177 aa14.03□□□□□ -0.16
CMTM4-201ENST00000330687 CCL24O00175 119 aa14.03□□□□□ -0.16
CMTM4-201ENST00000330687 PSPHP1O15172 72 aa14.03□□□□□ -0.16
CMTM4-201ENST00000330687 CXCL6P80162 114 aa14.03□□□□□ -0.16
CMTM4-201ENST00000330687 LOC110117498A0A087WWA1 95 aa14.03□□□□□ -0.16
CMTM4-201ENST00000330687 F8WDY8 70 aa14.02□□□□□ -0.16
CMTM4-201ENST00000330687 AKAP9Q99996 3911 aa14.02□□□□□ -0.16
CMTM4-201ENST00000330687 DIRC1Q969H9 104 aa14.02□□□□□ -0.17
CMTM4-201ENST00000330687 REG3AQ06141 175 aa14.02□□□□□ -0.17
CMTM4-201ENST00000330687 GIG44P09565 113 aaPredicted RBP14.01□□□□□ -0.17
CMTM4-201ENST00000330687 ESRGQ1W209 222 aa14.01□□□□□ -0.17
CMTM4-201ENST00000330687 Q6YL49 198 aa14.01□□□□□ -0.17
CMTM4-201ENST00000330687 KIAA0087Q14695 138 aa14□□□□□ -0.17
CMTM4-201ENST00000330687 KLK12Q9UKR0 248 aa14□□□□□ -0.17
CMTM4-201ENST00000330687 CYSRT1A8MQ03 144 aa13.99□□□□□ -0.17
CMTM4-201ENST00000330687 NBPF19A0A087WUL8 3843 aa13.98□□□□□ -0.17
CMTM4-201ENST00000330687 CD164L2Q6UWJ8 174 aa13.98□□□□□ -0.17
CMTM4-201ENST00000330687 COX7BP24311 80 aa13.96□□□□□ -0.17
CMTM4-201ENST00000330687 PDE6GP18545 87 aa13.96□□□□□ -0.17
CMTM4-201ENST00000330687 BCE1O60756 84 aa13.96□□□□□ -0.18
CMTM4-201ENST00000330687 UNC79Q9P2D8 2635 aa13.95□□□□□ -0.18
CMTM4-201ENST00000330687 ATP5EP56381 51 aaPredicted RBP13.94□□□□□ -0.18
CMTM4-201ENST00000330687 ZNF73O43830 326 aaPredicted RBP13.94□□□□□ -0.18
CMTM4-201ENST00000330687 COX17Q14061 63 aa13.93□□□□□ -0.18
CMTM4-201ENST00000330687 HIGD2BQ4VC39 106 aa13.93□□□□□ -0.18
CMTM4-201ENST00000330687 HECTD1Q9ULT8 2610 aa13.91□□□□□ -0.18
CMTM4-201ENST00000330687 SMIM29Q86T20 159 aa13.89□□□□□ -0.19
CMTM4-201ENST00000330687 PRO0255Q9UI72 69 aa13.88□□□□□ -0.19
CMTM4-201ENST00000330687 FLNAP21333 2647 aaKnown RBP13.88□□□□□ -0.19
CMTM4-201ENST00000330687 A0A1B0GUV1 79 aa13.86□□□□□ -0.19
CMTM4-201ENST00000330687 IGKV4-1P06312 121 aa13.86□□□□□ -0.19
CMTM4-201ENST00000330687 IGLV6-57P01721 117 aa13.85□□□□□ -0.19
CMTM4-201ENST00000330687 C9orf66Q5T8R8 295 aa13.85□□□□□ -0.19
CMTM4-201ENST00000330687 USP24Q9UPU5 2620 aa13.84□□□□□ -0.19
CMTM4-201ENST00000330687 PMAIP1Q13794 54 aa13.82□□□□□ -0.2
CMTM4-201ENST00000330687 OCR1Q9BZK8 76 aa13.82□□□□□ -0.2
CMTM4-201ENST00000330687 ITPR3Q14573 2671 aa13.82□□□□□ -0.2
CMTM4-201ENST00000330687 Q6ZTC4 211 aa13.8□□□□□ -0.2
CMTM4-201ENST00000330687 IGHV4-31P0DP07 118 aa13.8□□□□□ -0.2
CMTM4-201ENST00000330687 CSNK1G2-AS1Q8NCQ2 148 aa13.8□□□□□ -0.2
CMTM4-201ENST00000330687 CAMK2N2Q96S95 79 aa13.79□□□□□ -0.2
CMTM4-201ENST00000330687 DEFB116Q30KQ4 102 aa13.78□□□□□ -0.2
CMTM4-201ENST00000330687 C1orf64Q8NEQ6 169 aa13.78□□□□□ -0.2
CMTM4-201ENST00000330687 C6orf48Q9UBA6 75 aa13.78□□□□□ -0.2
CMTM4-201ENST00000330687 DEFB135Q30KP9 77 aa13.78□□□□□ -0.2
CMTM4-201ENST00000330687 FLNBO75369 2602 aaKnown RBP13.77□□□□□ -0.2
CMTM4-201ENST00000330687 DSCR9P59020 149 aa13.77□□□□□ -0.21
CMTM4-201ENST00000330687 LINC00612Q8N6U2 182 aa13.76□□□□□ -0.21
CMTM4-201ENST00000330687 HELZ2Q9BYK8 2649 aaKnown RBP13.74□□□□□ -0.21
CMTM4-201ENST00000330687 ELOF1P60002 83 aaKnown RBP13.73□□□□□ -0.21
CMTM4-201ENST00000330687 Q6ZRP5 223 aa13.73□□□□□ -0.21
CMTM4-201ENST00000330687 A8MU10 97 aa13.73□□□□□ -0.21
CMTM4-201ENST00000330687 SPTSSBQ8NFR3 76 aa13.73□□□□□ -0.21
CMTM4-201ENST00000330687 DNAJC9-AS1A6NH13 148 aa13.72□□□□□ -0.21
CMTM4-201ENST00000330687 A8MUN3 132 aa13.71□□□□□ -0.21
CMTM4-201ENST00000330687 RETNQ9HD89 108 aa13.71□□□□□ -0.21
CMTM4-201ENST00000330687 KRTAP10-9P60411 292 aa13.71□□□□□ -0.22
CMTM4-201ENST00000330687 BAHCC1Q9P281 2608 aa13.7□□□□□ -0.22
CMTM4-201ENST00000330687 hDV103S1A0JD37 113 aa13.7□□□□□ -0.22
CMTM4-201ENST00000330687 C19orf73Q9NVV2 129 aa13.7□□□□□ -0.22
CMTM4-201ENST00000330687 ERC2-IT1O76042 136 aa13.68□□□□□ -0.22
CMTM4-201ENST00000330687 CMC4P56277 68 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms