RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 YPEL4Q96NS1 127 aa7.97□□□□□ -1.13
GTF3C6-201ENST00000329970 TMEM126AQ9H061 195 aa7.97□□□□□ -1.13
GTF3C6-201ENST00000329970 SCO1O75880 301 aa7.96□□□□□ -1.14
GTF3C6-201ENST00000329970 CHTOPQ9Y3Y2 248 aaKnown RBP7.96□□□□□ -1.14
GTF3C6-201ENST00000329970 TMEM223A0PJW6 202 aa7.95□□□□□ -1.14
GTF3C6-201ENST00000329970 KRTAP13-2Q52LG2 175 aa7.95□□□□□ -1.14
GTF3C6-201ENST00000329970 M0R378 163 aa7.94□□□□□ -1.14
GTF3C6-201ENST00000329970 Q8NDZ9 215 aa7.94□□□□□ -1.14
GTF3C6-201ENST00000329970 IFI27L1Q96BM0 104 aa7.94□□□□□ -1.14
GTF3C6-201ENST00000329970 TSPAN13O95857 204 aa7.93□□□□□ -1.14
GTF3C6-201ENST00000329970 FAM19A1Q7Z5A9 133 aa7.93□□□□□ -1.14
GTF3C6-201ENST00000329970 TMEM238C9JI98 176 aa7.92□□□□□ -1.14
GTF3C6-201ENST00000329970 PRLHP81277 87 aa7.92□□□□□ -1.14
GTF3C6-201ENST00000329970 ANAPC11Q9NYG5 84 aa7.92□□□□□ -1.14
GTF3C6-201ENST00000329970 LINC00158P58513 81 aa7.9□□□□□ -1.14
GTF3C6-201ENST00000329970 HERV-K104P63124 156 aa7.9□□□□□ -1.14
GTF3C6-201ENST00000329970 LINC00304Q8N9R0 145 aa7.9□□□□□ -1.14
GTF3C6-201ENST00000329970 PLEKHB2Q96CS7 222 aa7.9□□□□□ -1.14
GTF3C6-201ENST00000329970 MUC2Q02817 5179 aa7.9□□□□□ -1.15
GTF3C6-201ENST00000329970 IGKV2D-26A0A0A0MRZ7 120 aa7.89□□□□□ -1.15
GTF3C6-201ENST00000329970 LINC00587B1AMM8 73 aa7.89□□□□□ -1.15
GTF3C6-201ENST00000329970 HSBP1O75506 76 aa7.88□□□□□ -1.15
GTF3C6-201ENST00000329970 CBLN2Q8IUK8 224 aa7.88□□□□□ -1.15
GTF3C6-201ENST00000329970 PRYO14603 147 aa7.87□□□□□ -1.15
GTF3C6-201ENST00000329970 SPRR1AP35321 89 aa7.87□□□□□ -1.15
GTF3C6-201ENST00000329970 SMIM13P0DJ93 91 aa7.86□□□□□ -1.15
GTF3C6-201ENST00000329970 LINC00337Q8N6G1 96 aa7.86□□□□□ -1.15
GTF3C6-201ENST00000329970 KCNQ1DNQ9H478 68 aa7.86□□□□□ -1.15
GTF3C6-201ENST00000329970 LOC107984156A0A0G2JMH3 177 aa7.85□□□□□ -1.15
GTF3C6-201ENST00000329970 ATP6V1G1O75348 118 aa7.85□□□□□ -1.15
GTF3C6-201ENST00000329970 MEIG1Q5JSS6 88 aa7.85□□□□□ -1.15
GTF3C6-201ENST00000329970 ARL17AQ8IVW1 177 aa7.85□□□□□ -1.15
GTF3C6-201ENST00000329970 MIR7-3HGQ8N6C7 128 aa7.85□□□□□ -1.15
GTF3C6-201ENST00000329970 HIGD2AQ9BW72 106 aa7.85□□□□□ -1.15
GTF3C6-201ENST00000329970 NDUFA12Q9UI09 145 aa7.85□□□□□ -1.15
GTF3C6-201ENST00000329970 ZNF706Q9Y5V0 76 aaPredicted RBP7.85□□□□□ -1.15
GTF3C6-201ENST00000329970 A0A0U1RRA0 63 aa7.84□□□□□ -1.15
GTF3C6-201ENST00000329970 MYMXA0A1B0GTQ4 84 aa7.84□□□□□ -1.15
GTF3C6-201ENST00000329970 TPRXLQ17RH7 258 aa7.84□□□□□ -1.15
GTF3C6-201ENST00000329970 BOD1L2Q8IYS8 172 aa7.84□□□□□ -1.15
GTF3C6-201ENST00000329970 FAM19A2Q8N3H0 131 aa7.84□□□□□ -1.15
GTF3C6-201ENST00000329970 SPRR4Q96PI1 79 aa7.84□□□□□ -1.15
GTF3C6-201ENST00000329970 MAP1LC3CQ9BXW4 147 aa7.84□□□□□ -1.15
GTF3C6-201ENST00000329970 KRTAP4-16G5E9R7 235 aaPredicted RBP7.83□□□□□ -1.16
GTF3C6-201ENST00000329970 LEPROTL1O95214 131 aa7.83□□□□□ -1.16
GTF3C6-201ENST00000329970 SPAG11AQ6PDA7 123 aa7.83□□□□□ -1.16
GTF3C6-201ENST00000329970 A0A0U1RQV1 116 aa7.82□□□□□ -1.16
GTF3C6-201ENST00000329970 LEPROTO15243 131 aa7.82□□□□□ -1.16
GTF3C6-201ENST00000329970 TRGC2P03986 189 aa7.82□□□□□ -1.16
GTF3C6-201ENST00000329970 PLNP26678 52 aa7.82□□□□□ -1.16
GTF3C6-201ENST00000329970 LINC00310P59036 64 aa7.82□□□□□ -1.16
GTF3C6-201ENST00000329970 C3orf22Q8N5N4 141 aa7.82□□□□□ -1.16
GTF3C6-201ENST00000329970 RETNLBQ9BQ08 111 aa7.81□□□□□ -1.16
GTF3C6-201ENST00000329970 NCR3O14931 201 aa7.8□□□□□ -1.16
GTF3C6-201ENST00000329970 SERF1AO75920 110 aa7.8□□□□□ -1.16
GTF3C6-201ENST00000329970 TRBV10-3A0A0K0K1G6 114 aa7.79□□□□□ -1.16
GTF3C6-201ENST00000329970 TRBV10-2A0A0K0K1G8 114 aa7.79□□□□□ -1.16
GTF3C6-201ENST00000329970 NMUP48645 174 aa7.79□□□□□ -1.16
GTF3C6-201ENST00000329970 TSPEAR-AS2P59090 65 aa7.79□□□□□ -1.16
GTF3C6-201ENST00000329970 S100A12P80511 92 aa7.79□□□□□ -1.16
GTF3C6-201ENST00000329970 HSPB8Q9UJY1 196 aa7.79□□□□□ -1.16
GTF3C6-201ENST00000329970 MUC17Q685J3 4493 aa7.79□□□□□ -1.16
GTF3C6-201ENST00000329970 IGLV7-46A0A075B6I9 117 aa7.78□□□□□ -1.16
GTF3C6-201ENST00000329970 ETDCA0A1B0GVM5 59 aa7.78□□□□□ -1.16
GTF3C6-201ENST00000329970 LINC00483Q53H64 154 aa7.78□□□□□ -1.16
GTF3C6-201ENST00000329970 SMCR5Q8TEV8 140 aa7.78□□□□□ -1.16
GTF3C6-201ENST00000329970 H0Y8G0 127 aa7.77□□□□□ -1.17
GTF3C6-201ENST00000329970 J3QQQ9 107 aa7.77□□□□□ -1.17
GTF3C6-201ENST00000329970 DPM2O94777 84 aa7.77□□□□□ -1.17
GTF3C6-201ENST00000329970 HERVK_113P61574 105 aa7.77□□□□□ -1.17
GTF3C6-201ENST00000329970 LCE2AQ5TA79 106 aaPredicted RBP7.77□□□□□ -1.17
GTF3C6-201ENST00000329970 FP248Q71RG6 208 aaPredicted RBP7.77□□□□□ -1.17
GTF3C6-201ENST00000329970 NDUFC2O95298 119 aa7.76□□□□□ -1.17
GTF3C6-201ENST00000329970 B5MCH6 92 aa7.75□□□□□ -1.17
GTF3C6-201ENST00000329970 IGKCP01834 107 aa7.75□□□□□ -1.17
GTF3C6-201ENST00000329970 DDTP30046 118 aa7.75□□□□□ -1.17
GTF3C6-201ENST00000329970 CDIP1Q9H305 208 aa7.75□□□□□ -1.17
GTF3C6-201ENST00000329970 SPANXB1Q9NS25 103 aaPredicted RBP7.75□□□□□ -1.17
GTF3C6-201ENST00000329970 C4orf48Q5BLP8 95 aa7.74□□□□□ -1.17
GTF3C6-201ENST00000329970 DAND5Q8N907 189 aa7.74□□□□□ -1.17
GTF3C6-201ENST00000329970 PPDPFQ9H3Y8 114 aa7.74□□□□□ -1.17
GTF3C6-201ENST00000329970 COLCA2A8K830 154 aa7.73□□□□□ -1.17
GTF3C6-201ENST00000329970 SPINK1P00995 79 aa7.73□□□□□ -1.17
GTF3C6-201ENST00000329970 IGLV6-57P01721 117 aa7.73□□□□□ -1.17
GTF3C6-201ENST00000329970 LGALS3P17931 250 aaKnown RBP7.73□□□□□ -1.17
GTF3C6-201ENST00000329970 RPS29P62273 56 aaKnown RBP7.73□□□□□ -1.17
GTF3C6-201ENST00000329970 Q6ZRX8 168 aa7.73□□□□□ -1.17
GTF3C6-201ENST00000329970 Q8NBF4 154 aa7.73□□□□□ -1.17
GTF3C6-201ENST00000329970 MIEN1Q9BRT3 115 aa7.73□□□□□ -1.17
GTF3C6-201ENST00000329970 FABP4P15090 132 aa7.72□□□□□ -1.17
GTF3C6-201ENST00000329970 FAT4Q6V0I7 4981 aa7.72□□□□□ -1.17
GTF3C6-201ENST00000329970 E9PLD3 99 aa7.71□□□□□ -1.18
GTF3C6-201ENST00000329970 SSBP3-AS1Q7Z2R9 100 aa7.71□□□□□ -1.18
GTF3C6-201ENST00000329970 PMCHL2Q9BQD1 86 aa7.71□□□□□ -1.18
GTF3C6-201ENST00000329970 Q9BRP9 147 aa7.71□□□□□ -1.18
GTF3C6-201ENST00000329970 A0A0J9YXY3 114 aa7.69□□□□□ -1.18
GTF3C6-201ENST00000329970 ERC2-IT1O76042 136 aa7.69□□□□□ -1.18
GTF3C6-201ENST00000329970 JOSD1Q15040 202 aaPredicted RBP7.69□□□□□ -1.18
GTF3C6-201ENST00000329970 GAGE2AQ6NT46 116 aa7.69□□□□□ -1.18
GTF3C6-201ENST00000329970 TRAV23DV6A0A075B6W5 121 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms