RNA–Protein interactions for RNA: ENST00000328839.3

PPP4R4-202, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 1 (best) BASIC

Gene PPP4R4, Length 876 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-202ENST00000328839 C11orf86A6NJI1 115 aa14.41□□□□□ -0.1
PPP4R4-202ENST00000328839 LINC00614P0C842 121 aa14.4□□□□□ -0.1
PPP4R4-202ENST00000328839 SFTA2Q6UW10 78 aa14.4□□□□□ -0.1
PPP4R4-202ENST00000328839 BAGE3Q86Y29 109 aa14.4□□□□□ -0.1
PPP4R4-202ENST00000328839 URB1-AS1Q96HZ7 61 aa14.4□□□□□ -0.1
PPP4R4-202ENST00000328839 RPS10P5Q9NQ39 176 aa14.4□□□□□ -0.1
PPP4R4-202ENST00000328839 LINC00158P58513 81 aa14.39□□□□□ -0.11
PPP4R4-202ENST00000328839 CTAG1AP78358 180 aa14.39□□□□□ -0.11
PPP4R4-202ENST00000328839 C18orf32Q8TCD1 76 aa14.39□□□□□ -0.11
PPP4R4-202ENST00000328839 PPDPFQ9H3Y8 114 aa14.38□□□□□ -0.11
PPP4R4-202ENST00000328839 A0A0U1RRA0 63 aa14.37□□□□□ -0.11
PPP4R4-202ENST00000328839 TRAPPC1Q9Y5R8 145 aa14.37□□□□□ -0.11
PPP4R4-202ENST00000328839 MUC17Q685J3 4493 aa14.35□□□□□ -0.11
PPP4R4-202ENST00000328839 RHEBQ15382 184 aa14.34□□□□□ -0.11
PPP4R4-202ENST00000328839 COMMD7Q86VX2 200 aa14.34□□□□□ -0.11
PPP4R4-202ENST00000328839 SPRR4Q96PI1 79 aa14.34□□□□□ -0.11
PPP4R4-202ENST00000328839 IFITM2Q01629 132 aa14.33□□□□□ -0.12
PPP4R4-202ENST00000328839 SPAG11AQ6PDA7 123 aa14.33□□□□□ -0.12
PPP4R4-202ENST00000328839 C4orf48Q5BLP8 95 aa14.32□□□□□ -0.12
PPP4R4-202ENST00000328839 CHTOPQ9Y3Y2 248 aaKnown RBP14.32□□□□□ -0.12
PPP4R4-202ENST00000328839 ZNF706Q9Y5V0 76 aaPredicted RBP14.32□□□□□ -0.12
PPP4R4-202ENST00000328839 ATP6V1G1O75348 118 aa14.3□□□□□ -0.12
PPP4R4-202ENST00000328839 PRYO14603 147 aa14.27□□□□□ -0.13
PPP4R4-202ENST00000328839 NCR3O14931 201 aa14.27□□□□□ -0.13
PPP4R4-202ENST00000328839 SMIM13P0DJ93 91 aa14.27□□□□□ -0.13
PPP4R4-202ENST00000328839 C10orf91Q5T1B1 145 aa14.27□□□□□ -0.13
PPP4R4-202ENST00000328839 BOD1L2Q8IYS8 172 aa14.27□□□□□ -0.13
PPP4R4-202ENST00000328839 DAND5Q8N907 189 aa14.27□□□□□ -0.13
PPP4R4-202ENST00000328839 TMEM223A0PJW6 202 aa14.26□□□□□ -0.13
PPP4R4-202ENST00000328839 MEIG1Q5JSS6 88 aa14.26□□□□□ -0.13
PPP4R4-202ENST00000328839 Q8NBF4 154 aa14.26□□□□□ -0.13
PPP4R4-202ENST00000328839 FP248Q71RG6 208 aaPredicted RBP14.25□□□□□ -0.13
PPP4R4-202ENST00000328839 LINC00337Q8N6G1 96 aa14.24□□□□□ -0.13
PPP4R4-202ENST00000328839 ETDCA0A1B0GVM5 59 aa14.22□□□□□ -0.13
PPP4R4-202ENST00000328839 MIR7-3HGQ8N6C7 128 aa14.22□□□□□ -0.13
PPP4R4-202ENST00000328839 SMCR5Q8TEV8 140 aa14.22□□□□□ -0.13
PPP4R4-202ENST00000328839 IFI27L1Q96BM0 104 aa14.2□□□□□ -0.14
PPP4R4-202ENST00000328839 TRAV12-1A0A0B4J245 112 aa14.19□□□□□ -0.14
PPP4R4-202ENST00000328839 KCNQ1DNQ9H478 68 aa14.19□□□□□ -0.14
PPP4R4-202ENST00000328839 SPRR1AP35321 89 aa14.18□□□□□ -0.14
PPP4R4-202ENST00000328839 KRTAP13-3Q3SY46 172 aa14.17□□□□□ -0.14
PPP4R4-202ENST00000328839 TRBV10-3A0A0K0K1G6 114 aa14.16□□□□□ -0.14
PPP4R4-202ENST00000328839 HERV-K104P63124 156 aa14.16□□□□□ -0.14
PPP4R4-202ENST00000328839 SPINK1P00995 79 aa14.15□□□□□ -0.14
PPP4R4-202ENST00000328839 S100A12P80511 92 aa14.15□□□□□ -0.14
PPP4R4-202ENST00000328839 GAGE2AQ6NT46 116 aa14.15□□□□□ -0.14
PPP4R4-202ENST00000328839 CHCHD1Q96BP2 118 aaKnown RBP14.15□□□□□ -0.14
PPP4R4-202ENST00000328839 KRTAP4-16G5E9R7 235 aaPredicted RBP14.14□□□□□ -0.15
PPP4R4-202ENST00000328839 APOC3P02656 99 aa14.14□□□□□ -0.15
PPP4R4-202ENST00000328839 NDUFA12Q9UI09 145 aa14.14□□□□□ -0.15
PPP4R4-202ENST00000328839 LINC00587B1AMM8 73 aa14.13□□□□□ -0.15
PPP4R4-202ENST00000328839 MAP1LC3CQ9BXW4 147 aa14.13□□□□□ -0.15
PPP4R4-202ENST00000328839 IGLV9-49A0A0B4J1Y8 123 aa14.12□□□□□ -0.15
PPP4R4-202ENST00000328839 MYMXA0A1B0GTQ4 84 aa14.12□□□□□ -0.15
PPP4R4-202ENST00000328839 MOBPQ13875 183 aa14.11□□□□□ -0.15
PPP4R4-202ENST00000328839 LINC00483Q53H64 154 aa14.11□□□□□ -0.15
PPP4R4-202ENST00000328839 KRTAP9-6A0A140TA67 174 aa14.1□□□□□ -0.15
PPP4R4-202ENST00000328839 H0Y8G0 127 aa14.1□□□□□ -0.15
PPP4R4-202ENST00000328839 ASB16-AS1Q495Z4 193 aa14.1□□□□□ -0.15
PPP4R4-202ENST00000328839 SNAPINO95295 136 aa14.09□□□□□ -0.15
PPP4R4-202ENST00000328839 B5MCH6 92 aa14.08□□□□□ -0.16
PPP4R4-202ENST00000328839 ERC2-IT1O76042 136 aa14.07□□□□□ -0.16
PPP4R4-202ENST00000328839 NDUFA5Q16718 116 aa14.07□□□□□ -0.16
PPP4R4-202ENST00000328839 FAM19A2Q8N3H0 131 aa14.07□□□□□ -0.16
PPP4R4-202ENST00000328839 HSBP1O75506 76 aa14.06□□□□□ -0.16
PPP4R4-202ENST00000328839 DDTP30046 118 aa14.06□□□□□ -0.16
PPP4R4-202ENST00000328839 SVBPQ8N300 66 aa14.06□□□□□ -0.16
PPP4R4-202ENST00000328839 TSPEAR-AS2P59090 65 aa14.04□□□□□ -0.16
PPP4R4-202ENST00000328839 SEC61BP60468 96 aaKnown RBP14.04□□□□□ -0.16
PPP4R4-202ENST00000328839 LINC01547P58512 204 aaPredicted RBP14.03□□□□□ -0.16
PPP4R4-202ENST00000328839 SSBP3-AS1Q7Z2R9 100 aa14.02□□□□□ -0.17
PPP4R4-202ENST00000328839 Q8N377 158 aa14.02□□□□□ -0.17
PPP4R4-202ENST00000328839 Q9BRP9 147 aa14.02□□□□□ -0.17
PPP4R4-202ENST00000328839 TRBV10-2A0A0K0K1G8 114 aa14□□□□□ -0.17
PPP4R4-202ENST00000328839 LEPROTO15243 131 aa14□□□□□ -0.17
PPP4R4-202ENST00000328839 RPS29P62273 56 aaKnown RBP14□□□□□ -0.17
PPP4R4-202ENST00000328839 Q6ZRX8 168 aa14□□□□□ -0.17
PPP4R4-202ENST00000328839 MIEN1Q9BRT3 115 aa14□□□□□ -0.17
PPP4R4-202ENST00000328839 KRTAP4-1Q9BYQ7 146 aa14□□□□□ -0.17
PPP4R4-202ENST00000328839 YPEL4Q96NS1 127 aa13.99□□□□□ -0.17
PPP4R4-202ENST00000328839 LOC107984156A0A0G2JMH3 177 aa13.98□□□□□ -0.17
PPP4R4-202ENST00000328839 SLC25A20O43772 301 aa13.98□□□□□ -0.17
PPP4R4-202ENST00000328839 S100A7L2Q5SY68 101 aa13.98□□□□□ -0.17
PPP4R4-202ENST00000328839 ARL17AQ8IVW1 177 aa13.98□□□□□ -0.17
PPP4R4-202ENST00000328839 SPANXB1Q9NS25 103 aaPredicted RBP13.98□□□□□ -0.17
PPP4R4-202ENST00000328839 C9orf153Q5TBE3 101 aa13.97□□□□□ -0.17
PPP4R4-202ENST00000328839 J3QQQ9 107 aa13.96□□□□□ -0.17
PPP4R4-202ENST00000328839 LEPROTL1O95214 131 aa13.95□□□□□ -0.18
PPP4R4-202ENST00000328839 PLNP26678 52 aa13.95□□□□□ -0.18
PPP4R4-202ENST00000328839 HERVK_113P61574 105 aa13.93□□□□□ -0.18
PPP4R4-202ENST00000328839 JOSD1Q15040 202 aaPredicted RBP13.93□□□□□ -0.18
PPP4R4-202ENST00000328839 TRAV23DV6A0A075B6W5 121 aa13.92□□□□□ -0.18
PPP4R4-202ENST00000328839 LGALS3P17931 250 aaKnown RBP13.92□□□□□ -0.18
PPP4R4-202ENST00000328839 IGLV6-57P01721 117 aa13.91□□□□□ -0.18
PPP4R4-202ENST00000328839 NMUP48645 174 aa13.91□□□□□ -0.18
PPP4R4-202ENST00000328839 NPC2P61916 151 aa13.91□□□□□ -0.18
PPP4R4-202ENST00000328839 PMCHL2Q9BQD1 86 aa13.91□□□□□ -0.18
PPP4R4-202ENST00000328839 NDUFC2O95298 119 aa13.9□□□□□ -0.18
PPP4R4-202ENST00000328839 SERF1AO75920 110 aa13.89□□□□□ -0.19
PPP4R4-202ENST00000328839 DPM2O94777 84 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms