RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 A0A087WVE0 104 aa9.53□□□□□ -0.88
ATP2C1-201ENST00000328560 RETNQ9HD89 108 aa9.53□□□□□ -0.88
ATP2C1-201ENST00000328560 WFDC9Q8NEX5 89 aa9.52□□□□□ -0.88
ATP2C1-201ENST00000328560 NDUFC2O95298 119 aa9.52□□□□□ -0.89
ATP2C1-201ENST00000328560 C9orf153Q5TBE3 101 aa9.52□□□□□ -0.89
ATP2C1-201ENST00000328560 HIST1H4AP62805 103 aaKnown RBP9.52□□□□□ -0.89
ATP2C1-201ENST00000328560 HIGD2BQ4VC39 106 aa9.51□□□□□ -0.89
ATP2C1-201ENST00000328560 TMEM256-PLSCR3K7ERE1 68 aa9.5□□□□□ -0.89
ATP2C1-201ENST00000328560 ENHOQ6UWT2 76 aa9.5□□□□□ -0.89
ATP2C1-201ENST00000328560 OBSCN-AS1Q96MR7 158 aa9.5□□□□□ -0.89
ATP2C1-201ENST00000328560 LAMTOR3Q9UHA4 124 aa9.5□□□□□ -0.89
ATP2C1-201ENST00000328560 CCKP06307 115 aa9.48□□□□□ -0.89
ATP2C1-201ENST00000328560 LYPD5Q6UWN5 251 aa9.48□□□□□ -0.89
ATP2C1-201ENST00000328560 LOC107984640A0A0U1RRK4 108 aa9.48□□□□□ -0.89
ATP2C1-201ENST00000328560 JMJD7-PLA2G4BH0Y9G9 81 aa9.48□□□□□ -0.89
ATP2C1-201ENST00000328560 WFDC10BQ8IUB3 73 aa9.48□□□□□ -0.89
ATP2C1-201ENST00000328560 hADV29S1A0JD25 119 aa9.47□□□□□ -0.89
ATP2C1-201ENST00000328560 C3orf22Q8N5N4 141 aa9.47□□□□□ -0.89
ATP2C1-201ENST00000328560 A0A1B0GX51 115 aa9.46□□□□□ -0.89
ATP2C1-201ENST00000328560 LINC00575Q6W349 94 aa9.46□□□□□ -0.89
ATP2C1-201ENST00000328560 ZNF561-AS1K7EIQ3 104 aa9.46□□□□□ -0.9
ATP2C1-201ENST00000328560 Q6JHZ5 121 aa9.46□□□□□ -0.9
ATP2C1-201ENST00000328560 C6orf48Q9UBA6 75 aa9.46□□□□□ -0.9
ATP2C1-201ENST00000328560 TRBV10-3A0A0K0K1G6 114 aa9.45□□□□□ -0.9
ATP2C1-201ENST00000328560 KPRPQ5T749 579 aaPredicted RBP9.45□□□□□ -0.9
ATP2C1-201ENST00000328560 Q6ZQY7 126 aa9.45□□□□□ -0.9
ATP2C1-201ENST00000328560 CAMK2N2Q96S95 79 aa9.45□□□□□ -0.9
ATP2C1-201ENST00000328560 PRR34Q9NV39 138 aa9.45□□□□□ -0.9
ATP2C1-201ENST00000328560 UQCRQO14949 82 aa9.44□□□□□ -0.9
ATP2C1-201ENST00000328560 LINC00167Q96N53 147 aa9.44□□□□□ -0.9
ATP2C1-201ENST00000328560 PKD1L1Q8TDX9 2849 aa9.44□□□□□ -0.9
ATP2C1-201ENST00000328560 Q6ZTC4 211 aa9.44□□□□□ -0.9
ATP2C1-201ENST00000328560 A0A0J9YWU9 116 aa9.43□□□□□ -0.9
ATP2C1-201ENST00000328560 ATOX1O00244 68 aa9.43□□□□□ -0.9
ATP2C1-201ENST00000328560 RBM3P98179 157 aaKnown RBP9.43□□□□□ -0.9
ATP2C1-201ENST00000328560 COX7CP15954 63 aa9.41□□□□□ -0.9
ATP2C1-201ENST00000328560 UBL5Q9BZL1 73 aa9.41□□□□□ -0.9
ATP2C1-201ENST00000328560 STAB1Q9NY15 2570 aa9.41□□□□□ -0.9
ATP2C1-201ENST00000328560 TRAV23DV6A0A075B6W5 121 aa9.4□□□□□ -0.9
ATP2C1-201ENST00000328560 USP17L23D6RBM5 183 aa9.4□□□□□ -0.9
ATP2C1-201ENST00000328560 FAM19A1Q7Z5A9 133 aa9.4□□□□□ -0.9
ATP2C1-201ENST00000328560 WIPF1O43516 503 aa9.4□□□□□ -0.91
ATP2C1-201ENST00000328560 IGLV6-57P01721 117 aa9.4□□□□□ -0.91
ATP2C1-201ENST00000328560 DIRC1Q969H9 104 aa9.4□□□□□ -0.91
ATP2C1-201ENST00000328560 M0R2N4 97 aa9.39□□□□□ -0.91
ATP2C1-201ENST00000328560 IGKV2D-24A0A075B6R9 120 aa9.39□□□□□ -0.91
ATP2C1-201ENST00000328560 NOTCH1P46531 2555 aa9.39□□□□□ -0.91
ATP2C1-201ENST00000328560 HAMPP81172 84 aa9.38□□□□□ -0.91
ATP2C1-201ENST00000328560 KRTAP24-1Q3LI83 254 aa9.38□□□□□ -0.91
ATP2C1-201ENST00000328560 Q6ZRU5 148 aa9.38□□□□□ -0.91
ATP2C1-201ENST00000328560 DEFB131BA0A096LNP1 70 aa9.38□□□□□ -0.91
ATP2C1-201ENST00000328560 C11orf45Q8TAV5 145 aa9.38□□□□□ -0.91
ATP2C1-201ENST00000328560 DSCR8Q96T75 97 aa9.38□□□□□ -0.91
ATP2C1-201ENST00000328560 C1orf43Q9BWL3 253 aa9.38□□□□□ -0.91
ATP2C1-201ENST00000328560 KRTAP10-11P60412 298 aa9.37□□□□□ -0.91
ATP2C1-201ENST00000328560 C2orf48Q96LS8 159 aa9.37□□□□□ -0.91
ATP2C1-201ENST00000328560 ZNF73O43830 326 aaPredicted RBP9.37□□□□□ -0.91
ATP2C1-201ENST00000328560 TENM3Q9P273 2699 aa9.37□□□□□ -0.91
ATP2C1-201ENST00000328560 ESRGQ1W209 222 aa9.37□□□□□ -0.91
ATP2C1-201ENST00000328560 FAM19A5Q7Z5A7 132 aaPredicted RBP9.37□□□□□ -0.91
ATP2C1-201ENST00000328560 COX7BP24311 80 aa9.36□□□□□ -0.91
ATP2C1-201ENST00000328560 MAST4O15021 2626 aa9.36□□□□□ -0.91
ATP2C1-201ENST00000328560 MUC7Q8TAX7 377 aa9.36□□□□□ -0.91
ATP2C1-201ENST00000328560 Q6ZQT0 140 aa9.35□□□□□ -0.91
ATP2C1-201ENST00000328560 GVQW2A0A096LPI5 108 aaPredicted RBP9.35□□□□□ -0.91
ATP2C1-201ENST00000328560 SERP2Q8N6R1 65 aa9.34□□□□□ -0.91
ATP2C1-201ENST00000328560 CYSTM1Q9H1C7 97 aa9.34□□□□□ -0.91
ATP2C1-201ENST00000328560 UPK3BQ9BT76 320 aa9.33□□□□□ -0.92
ATP2C1-201ENST00000328560 H3BNG1 76 aa9.33□□□□□ -0.92
ATP2C1-201ENST00000328560 GHRHP01286 108 aa9.33□□□□□ -0.92
ATP2C1-201ENST00000328560 MRAPQ8TCY5 172 aa9.32□□□□□ -0.92
ATP2C1-201ENST00000328560 VPREB1P12018 145 aa9.32□□□□□ -0.92
ATP2C1-201ENST00000328560 C15orf56Q8N910 161 aa9.32□□□□□ -0.92
ATP2C1-201ENST00000328560 EGFEM1PQ0D2K5 195 aa9.31□□□□□ -0.92
ATP2C1-201ENST00000328560 SCXQ7RTU7 201 aa9.31□□□□□ -0.92
ATP2C1-201ENST00000328560 NDUFC2-KCTD14E9PQ53 114 aa9.3□□□□□ -0.92
ATP2C1-201ENST00000328560 PRB2P02812 416 aaPredicted RBP9.3□□□□□ -0.92
ATP2C1-201ENST00000328560 M0R378 163 aa9.29□□□□□ -0.92
ATP2C1-201ENST00000328560 CRYGAP11844 174 aa9.29□□□□□ -0.92
ATP2C1-201ENST00000328560 ATP5EP2Q5VTU8 51 aa9.29□□□□□ -0.92
ATP2C1-201ENST00000328560 KRTAP26-1Q6PEX3 210 aa9.29□□□□□ -0.92
ATP2C1-201ENST00000328560 Q6ZRP5 223 aa9.29□□□□□ -0.92
ATP2C1-201ENST00000328560 F8WDY8 70 aa9.29□□□□□ -0.92
ATP2C1-201ENST00000328560 Q6ZVQ6 151 aa9.29□□□□□ -0.92
ATP2C1-201ENST00000328560 DEFB105AQ8NG35 78 aa9.29□□□□□ -0.92
ATP2C1-201ENST00000328560 ELOF1P60002 83 aaKnown RBP9.28□□□□□ -0.92
ATP2C1-201ENST00000328560 LOC110117498A0A087WWA1 95 aa9.28□□□□□ -0.92
ATP2C1-201ENST00000328560 SYCNQ0VAF6 134 aa9.28□□□□□ -0.92
ATP2C1-201ENST00000328560 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.28□□□□□ -0.92
ATP2C1-201ENST00000328560 LINC01547P58512 204 aaPredicted RBP9.27□□□□□ -0.93
ATP2C1-201ENST00000328560 NKAPP1Q8N9T2 125 aa9.26□□□□□ -0.93
ATP2C1-201ENST00000328560 SEC61GP60059 68 aa9.25□□□□□ -0.93
ATP2C1-201ENST00000328560 HRCT1Q6UXD1 115 aa9.25□□□□□ -0.93
ATP2C1-201ENST00000328560 C20orf197Q8N268 126 aa9.24□□□□□ -0.93
ATP2C1-201ENST00000328560 FBN1P35555 2871 aaKnown RBP9.24□□□□□ -0.93
ATP2C1-201ENST00000328560 LINC01556Q5JQF7 62 aa9.24□□□□□ -0.93
ATP2C1-201ENST00000328560 TRAV10A0A0B4J240 114 aa9.24□□□□□ -0.93
ATP2C1-201ENST00000328560 RPL37AP8A6NKH3 93 aa9.23□□□□□ -0.93
ATP2C1-201ENST00000328560 COL6A5A8TX70 2615 aa9.23□□□□□ -0.93
ATP2C1-201ENST00000328560 J3KT08 172 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms