RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 KMT2CQ8NEZ4 4911 aaKnown RBP12.34□□□□□ -0.43
EXOSC3-201ENST00000327304 F8W1H4 67 aa12.34□□□□□ -0.43
EXOSC3-201ENST00000327304 TCL1BO95988 128 aa12.34□□□□□ -0.43
EXOSC3-201ENST00000327304 C1orf134Q5TEV5 83 aa12.34□□□□□ -0.43
EXOSC3-201ENST00000327304 LINC00526Q96FQ7 95 aa12.34□□□□□ -0.43
EXOSC3-201ENST00000327304 C2orf48Q96LS8 159 aa12.34□□□□□ -0.43
EXOSC3-201ENST00000327304 IGKV2-28A0A075B6P5 120 aa12.33□□□□□ -0.44
EXOSC3-201ENST00000327304 IGKV2D-28P01615 120 aa12.33□□□□□ -0.44
EXOSC3-201ENST00000327304 C9orf116Q5BN46 136 aaPredicted RBP12.33□□□□□ -0.44
EXOSC3-201ENST00000327304 DNAH17Q9UFH2 4485 aa12.33□□□□□ -0.44
EXOSC3-201ENST00000327304 LECT2O14960 151 aa12.32□□□□□ -0.44
EXOSC3-201ENST00000327304 NDUFC2O95298 119 aa12.32□□□□□ -0.44
EXOSC3-201ENST00000327304 WFDC2Q14508 124 aa12.32□□□□□ -0.44
EXOSC3-201ENST00000327304 USP17L23D6RBM5 183 aa12.31□□□□□ -0.44
EXOSC3-201ENST00000327304 HIGD2BQ4VC39 106 aa12.31□□□□□ -0.44
EXOSC3-201ENST00000327304 CAMK2N2Q96S95 79 aa12.31□□□□□ -0.44
EXOSC3-201ENST00000327304 RYR2Q92736 4967 aa12.31□□□□□ -0.44
EXOSC3-201ENST00000327304 LINC00337Q8N6G1 96 aa12.3□□□□□ -0.44
EXOSC3-201ENST00000327304 C6orf48Q9UBA6 75 aa12.3□□□□□ -0.44
EXOSC3-201ENST00000327304 PRO0461Q9UI25 63 aa12.3□□□□□ -0.44
EXOSC3-201ENST00000327304 FRAS1Q86XX4 4008 aa12.28□□□□□ -0.44
EXOSC3-201ENST00000327304 ATXN8Q156A1 80 aa12.28□□□□□ -0.44
EXOSC3-201ENST00000327304 LRCOL1A6NCL2 159 aa12.27□□□□□ -0.45
EXOSC3-201ENST00000327304 RPL28P46779 137 aaKnown RBP12.26□□□□□ -0.45
EXOSC3-201ENST00000327304 RTL8CO15255 209 aa12.25□□□□□ -0.45
EXOSC3-201ENST00000327304 Q6ZRU5 148 aa12.25□□□□□ -0.45
EXOSC3-201ENST00000327304 SYCNQ0VAF6 134 aa12.23□□□□□ -0.45
EXOSC3-201ENST00000327304 LST1O00453 97 aa12.22□□□□□ -0.45
EXOSC3-201ENST00000327304 FAT2Q9NYQ8 4349 aa12.22□□□□□ -0.45
EXOSC3-201ENST00000327304 A0A087WTM6 91 aa12.21□□□□□ -0.45
EXOSC3-201ENST00000327304 LINC01620Q4KN68 170 aa12.21□□□□□ -0.45
EXOSC3-201ENST00000327304 OR13C6PQ8NH95 151 aa12.21□□□□□ -0.45
EXOSC3-201ENST00000327304 TNP2Q05952 138 aa12.21□□□□□ -0.46
EXOSC3-201ENST00000327304 RNF151Q2KHN1 245 aa12.21□□□□□ -0.46
EXOSC3-201ENST00000327304 MTURNQ8N3F0 131 aa12.21□□□□□ -0.46
EXOSC3-201ENST00000327304 SMIM11BQ8TCY0 68 aa12.21□□□□□ -0.46
EXOSC3-201ENST00000327304 NDUFC2-KCTD14E9PQ53 114 aa12.2□□□□□ -0.46
EXOSC3-201ENST00000327304 M0QXV9 152 aa12.2□□□□□ -0.46
EXOSC3-201ENST00000327304 SLPIP03973 132 aa12.2□□□□□ -0.46
EXOSC3-201ENST00000327304 SMCPP49901 116 aaPredicted RBP12.2□□□□□ -0.46
EXOSC3-201ENST00000327304 CLEC2BQ92478 149 aa12.2□□□□□ -0.46
EXOSC3-201ENST00000327304 TMEM126AQ9H061 195 aa12.19□□□□□ -0.46
EXOSC3-201ENST00000327304 C9JAW5 83 aa12.18□□□□□ -0.46
EXOSC3-201ENST00000327304 C14orf177Q52M58 125 aa12.18□□□□□ -0.46
EXOSC3-201ENST00000327304 OCIAD2Q56VL3 154 aa12.18□□□□□ -0.46
EXOSC3-201ENST00000327304 DNAH11Q96DT5 4516 aa12.18□□□□□ -0.46
EXOSC3-201ENST00000327304 Q8N814 137 aa12.18□□□□□ -0.46
EXOSC3-201ENST00000327304 Q8NDZ9 215 aa12.18□□□□□ -0.46
EXOSC3-201ENST00000327304 LINC01600Q96MT4 127 aa12.18□□□□□ -0.46
EXOSC3-201ENST00000327304 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.17□□□□□ -0.46
EXOSC3-201ENST00000327304 TRBV10-2A0A0K0K1G8 114 aa12.17□□□□□ -0.46
EXOSC3-201ENST00000327304 SLC25A20O43772 301 aa12.17□□□□□ -0.46
EXOSC3-201ENST00000327304 PRR3P79522 188 aaKnown RBP12.17□□□□□ -0.46
EXOSC3-201ENST00000327304 CARD19Q96LW7 228 aa12.17□□□□□ -0.46
EXOSC3-201ENST00000327304 H0YGX0 51 aa12.16□□□□□ -0.46
EXOSC3-201ENST00000327304 ETDBQ3ZM63 59 aa12.16□□□□□ -0.46
EXOSC3-201ENST00000327304 K7ERU9 68 aa12.15□□□□□ -0.46
EXOSC3-201ENST00000327304 TLX1NBP0CAT3 122 aa12.15□□□□□ -0.46
EXOSC3-201ENST00000327304 NCR3O14931 201 aa12.14□□□□□ -0.47
EXOSC3-201ENST00000327304 XAGE1AQ9HD64 81 aa12.14□□□□□ -0.47
EXOSC3-201ENST00000327304 RYR3Q15413 4870 aa12.14□□□□□ -0.47
EXOSC3-201ENST00000327304 TRACP01848 142 aa12.14□□□□□ -0.47
EXOSC3-201ENST00000327304 CNBPP62633 177 aaKnown RBP12.13□□□□□ -0.47
EXOSC3-201ENST00000327304 Q6ZRP5 223 aa12.13□□□□□ -0.47
EXOSC3-201ENST00000327304 ANKRD29Q8N6D5 301 aa12.13□□□□□ -0.47
EXOSC3-201ENST00000327304 S100A7L2Q5SY68 101 aa12.12□□□□□ -0.47
EXOSC3-201ENST00000327304 H3BT86 120 aa12.11□□□□□ -0.47
EXOSC3-201ENST00000327304 FUSP35637 526 aaKnown RBP eCLIP12.11□□□□□ -0.47
EXOSC3-201ENST00000327304 HECTD4Q9Y4D8 3996 aa12.11□□□□□ -0.47
EXOSC3-201ENST00000327304 TEN1Q86WV5 123 aa12.11□□□□□ -0.47
EXOSC3-201ENST00000327304 IGLV6-57P01721 117 aa12.1□□□□□ -0.47
EXOSC3-201ENST00000327304 FAM218AQ96MZ4 157 aa12.1□□□□□ -0.47
EXOSC3-201ENST00000327304 PKD1P98161 4303 aa12.1□□□□□ -0.47
EXOSC3-201ENST00000327304 VPREB1P12018 145 aa12.09□□□□□ -0.47
EXOSC3-201ENST00000327304 RPL18AQ02543 176 aaKnown RBP12.09□□□□□ -0.47
EXOSC3-201ENST00000327304 GAGE2EQ4V326 116 aa12.09□□□□□ -0.47
EXOSC3-201ENST00000327304 GAGE2DQ9UEU5 116 aa12.09□□□□□ -0.47
EXOSC3-201ENST00000327304 LINC00336Q6ZUF6 198 aa12.07□□□□□ -0.48
EXOSC3-201ENST00000327304 J3QR89 54 aa12.06□□□□□ -0.48
EXOSC3-201ENST00000327304 M0R378 163 aa12.06□□□□□ -0.48
EXOSC3-201ENST00000327304 C9orf129Q5T035 196 aaKnown RBP12.06□□□□□ -0.48
EXOSC3-201ENST00000327304 KRTAP10-2P60368 255 aa12.05□□□□□ -0.48
EXOSC3-201ENST00000327304 PLA2G2DQ9UNK4 145 aa12.05□□□□□ -0.48
EXOSC3-201ENST00000327304 A0A1B0GX51 115 aa12.04□□□□□ -0.48
EXOSC3-201ENST00000327304 PPDPFLQ8WWR9 84 aa12.04□□□□□ -0.48
EXOSC3-201ENST00000327304 DNAH5Q8TE73 4624 aa12.04□□□□□ -0.48
EXOSC3-201ENST00000327304 C9orf163Q8N9P6 203 aa12.04□□□□□ -0.48
EXOSC3-201ENST00000327304 A0A087WYN8 130 aa12.03□□□□□ -0.48
EXOSC3-201ENST00000327304 TRBV10-3A0A0K0K1G6 114 aa12.03□□□□□ -0.48
EXOSC3-201ENST00000327304 LOC107984640A0A0U1RRK4 108 aa12.03□□□□□ -0.48
EXOSC3-201ENST00000327304 C6orf99Q4VX62 202 aa12.03□□□□□ -0.48
EXOSC3-201ENST00000327304 CBY1Q9Y3M2 126 aa12.03□□□□□ -0.48
EXOSC3-201ENST00000327304 IGLV5-52A0A0A0MRZ9 124 aa12.02□□□□□ -0.48
EXOSC3-201ENST00000327304 DNAL4O96015 105 aa12.02□□□□□ -0.49
EXOSC3-201ENST00000327304 TRAV23DV6A0A075B6W5 121 aa12.01□□□□□ -0.49
EXOSC3-201ENST00000327304 BAALC-AS2P0C853 105 aa11.99□□□□□ -0.49
EXOSC3-201ENST00000327304 IGLV5-37A0A075B6J1 123 aa11.98□□□□□ -0.49
EXOSC3-201ENST00000327304 A0A1B0GVY2 172 aa11.97□□□□□ -0.49
EXOSC3-201ENST00000327304 SNCGO76070 127 aa11.97□□□□□ -0.49
EXOSC3-201ENST00000327304 GAGE2BQ13066 116 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms