RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 ZNF625Q96I27 306 aaPredicted RBP8.45□□□□□ -1.06
RPAIN-201ENST00000327154 IGKCP01834 107 aa8.44□□□□□ -1.06
RPAIN-201ENST00000327154 PFN2P35080 140 aa8.44□□□□□ -1.06
RPAIN-201ENST00000327154 MRPL55Q7Z7F7 128 aaKnown RBP8.44□□□□□ -1.06
RPAIN-201ENST00000327154 SYS1-DBNDD2H3BUS1 97 aa8.43□□□□□ -1.06
RPAIN-201ENST00000327154 RPL13AP40429 203 aaKnown RBP8.43□□□□□ -1.06
RPAIN-201ENST00000327154 TP73-AS1Q9UF72 201 aa8.43□□□□□ -1.06
RPAIN-201ENST00000327154 HERVK_113P61574 105 aa8.42□□□□□ -1.06
RPAIN-201ENST00000327154 SFTA2Q6UW10 78 aa8.42□□□□□ -1.06
RPAIN-201ENST00000327154 ERG28Q9UKR5 140 aa8.42□□□□□ -1.06
RPAIN-201ENST00000327154 RPL37AP8A6NKH3 93 aa8.41□□□□□ -1.06
RPAIN-201ENST00000327154 LINC00167Q96N53 147 aa8.41□□□□□ -1.06
RPAIN-201ENST00000327154 BCE1O60756 84 aa8.4□□□□□ -1.06
RPAIN-201ENST00000327154 C3orf79P0CE67 100 aa8.4□□□□□ -1.06
RPAIN-201ENST00000327154 KRTDAPP60985 99 aa8.4□□□□□ -1.06
RPAIN-201ENST00000327154 GAGE10A6NGK3 116 aa8.39□□□□□ -1.07
RPAIN-201ENST00000327154 LEPROTO15243 131 aa8.39□□□□□ -1.07
RPAIN-201ENST00000327154 RPL28P46779 137 aaKnown RBP8.39□□□□□ -1.07
RPAIN-201ENST00000327154 TSPEAR-AS2P59090 65 aa8.39□□□□□ -1.07
RPAIN-201ENST00000327154 PET117Q6UWS5 81 aa8.39□□□□□ -1.07
RPAIN-201ENST00000327154 PLEKHB2Q96CS7 222 aa8.39□□□□□ -1.07
RPAIN-201ENST00000327154 NDUFA12Q9UI09 145 aa8.39□□□□□ -1.07
RPAIN-201ENST00000327154 A0A0U1RRA0 63 aa8.38□□□□□ -1.07
RPAIN-201ENST00000327154 LINC00158P58513 81 aa8.38□□□□□ -1.07
RPAIN-201ENST00000327154 COX17Q14061 63 aa8.38□□□□□ -1.07
RPAIN-201ENST00000327154 PRR4Q16378 134 aa8.38□□□□□ -1.07
RPAIN-201ENST00000327154 MEIG1Q5JSS6 88 aa8.38□□□□□ -1.07
RPAIN-201ENST00000327154 LINC01545Q5VT33 79 aa8.38□□□□□ -1.07
RPAIN-201ENST00000327154 LPAP08519 4548 aa8.38□□□□□ -1.07
RPAIN-201ENST00000327154 MYMXA0A1B0GTQ4 84 aa8.37□□□□□ -1.07
RPAIN-201ENST00000327154 J3QQQ9 107 aa8.37□□□□□ -1.07
RPAIN-201ENST00000327154 TSPAN13O95857 204 aa8.36□□□□□ -1.07
RPAIN-201ENST00000327154 S100A6P06703 90 aa8.36□□□□□ -1.07
RPAIN-201ENST00000327154 LGALS3P17931 250 aaKnown RBP8.36□□□□□ -1.07
RPAIN-201ENST00000327154 S100A2P29034 98 aa8.36□□□□□ -1.07
RPAIN-201ENST00000327154 HERV-K104P63124 156 aa8.36□□□□□ -1.07
RPAIN-201ENST00000327154 SND1-IT1Q9HBX3 110 aa8.36□□□□□ -1.07
RPAIN-201ENST00000327154 IGLV5-37A0A075B6J1 123 aa8.35□□□□□ -1.07
RPAIN-201ENST00000327154 A0A087X002 238 aa8.35□□□□□ -1.07
RPAIN-201ENST00000327154 C20orf202A1L168 122 aa8.35□□□□□ -1.07
RPAIN-201ENST00000327154 SMIM13P0DJ93 91 aa8.35□□□□□ -1.07
RPAIN-201ENST00000327154 HIST3H2BBQ8N257 126 aa8.35□□□□□ -1.07
RPAIN-201ENST00000327154 NKAPP1Q8N9T2 125 aa8.35□□□□□ -1.07
RPAIN-201ENST00000327154 ANAPC11Q9NYG5 84 aa8.34□□□□□ -1.07
RPAIN-201ENST00000327154 E9PLD3 99 aa8.33□□□□□ -1.08
RPAIN-201ENST00000327154 CRYGAP11844 174 aa8.33□□□□□ -1.08
RPAIN-201ENST00000327154 UBE2AP49459 152 aa8.33□□□□□ -1.08
RPAIN-201ENST00000327154 IGKV2-28A0A075B6P5 120 aa8.32□□□□□ -1.08
RPAIN-201ENST00000327154 IGKV2D-28P01615 120 aa8.32□□□□□ -1.08
RPAIN-201ENST00000327154 NMUP48645 174 aa8.32□□□□□ -1.08
RPAIN-201ENST00000327154 TYMSOSQ8TAI1 123 aa8.32□□□□□ -1.08
RPAIN-201ENST00000327154 HIST1H2BLQ99880 126 aa8.32□□□□□ -1.08
RPAIN-201ENST00000327154 LINC00587B1AMM8 73 aa8.31□□□□□ -1.08
RPAIN-201ENST00000327154 KRTAP13-1Q8IUC0 172 aa8.31□□□□□ -1.08
RPAIN-201ENST00000327154 MIR7-3HGQ8N6C7 128 aa8.31□□□□□ -1.08
RPAIN-201ENST00000327154 VPREB1P12018 145 aa8.3□□□□□ -1.08
RPAIN-201ENST00000327154 SNRPEP62304 92 aaKnown RBP8.3□□□□□ -1.08
RPAIN-201ENST00000327154 RPL24P83731 157 aaKnown RBP8.3□□□□□ -1.08
RPAIN-201ENST00000327154 ATOH7Q8N100 152 aa8.3□□□□□ -1.08
RPAIN-201ENST00000327154 DAND5Q8N907 189 aa8.29□□□□□ -1.08
RPAIN-201ENST00000327154 Q8NDZ9 215 aa8.29□□□□□ -1.08
RPAIN-201ENST00000327154 IGKV2D-26A0A0A0MRZ7 120 aa8.28□□□□□ -1.08
RPAIN-201ENST00000327154 KRTAP13-2Q52LG2 175 aa8.28□□□□□ -1.08
RPAIN-201ENST00000327154 A0A0J9YXY3 114 aa8.27□□□□□ -1.09
RPAIN-201ENST00000327154 TMEM238C9JI98 176 aa8.27□□□□□ -1.09
RPAIN-201ENST00000327154 BOD1L2Q8IYS8 172 aa8.27□□□□□ -1.09
RPAIN-201ENST00000327154 ZNF815PA8K554 130 aa8.26□□□□□ -1.09
RPAIN-201ENST00000327154 AKR1D1P51857 326 aa8.26□□□□□ -1.09
RPAIN-201ENST00000327154 PRLHP81277 87 aa8.26□□□□□ -1.09
RPAIN-201ENST00000327154 FAM19A1Q7Z5A9 133 aa8.26□□□□□ -1.09
RPAIN-201ENST00000327154 TTTY13Q9BZ97 58 aa8.26□□□□□ -1.09
RPAIN-201ENST00000327154 TMEM126AQ9H061 195 aa8.26□□□□□ -1.09
RPAIN-201ENST00000327154 C5orf52A6NGY3 159 aa8.25□□□□□ -1.09
RPAIN-201ENST00000327154 NCR3O14931 201 aa8.25□□□□□ -1.09
RPAIN-201ENST00000327154 FAM229BQ4G0N7 80 aa8.25□□□□□ -1.09
RPAIN-201ENST00000327154 ANKRD39Q53RE8 183 aa8.25□□□□□ -1.09
RPAIN-201ENST00000327154 MIEN1Q9BRT3 115 aa8.25□□□□□ -1.09
RPAIN-201ENST00000327154 M0R378 163 aa8.24□□□□□ -1.09
RPAIN-201ENST00000327154 NPC2P61916 151 aa8.24□□□□□ -1.09
RPAIN-201ENST00000327154 ADAMTSL4-AS1Q5T5F5 129 aa8.22□□□□□ -1.09
RPAIN-201ENST00000327154 LINC00304Q8N9R0 145 aa8.22□□□□□ -1.09
RPAIN-201ENST00000327154 HSBP1L1C9JCN9 74 aa8.2□□□□□ -1.1
RPAIN-201ENST00000327154 SCGB1D1O95968 90 aa8.2□□□□□ -1.1
RPAIN-201ENST00000327154 SCGB1D4Q6XE38 83 aa8.2□□□□□ -1.1
RPAIN-201ENST00000327154 RETNLBQ9BQ08 111 aa8.2□□□□□ -1.1
RPAIN-201ENST00000327154 LOC107984156A0A0G2JMH3 177 aa8.19□□□□□ -1.1
RPAIN-201ENST00000327154 TIMM17BO60830 172 aa8.19□□□□□ -1.1
RPAIN-201ENST00000327154 SOSTDC1Q6X4U4 206 aa8.19□□□□□ -1.1
RPAIN-201ENST00000327154 PCP2Q8IVA1 136 aa8.19□□□□□ -1.1
RPAIN-201ENST00000327154 ARL17AQ8IVW1 177 aa8.19□□□□□ -1.1
RPAIN-201ENST00000327154 LITAFQ99732 161 aa8.19□□□□□ -1.1
RPAIN-201ENST00000327154 MUC2Q02817 5179 aa8.19□□□□□ -1.1
RPAIN-201ENST00000327154 HIGD2AQ9BW72 106 aa8.18□□□□□ -1.1
RPAIN-201ENST00000327154 TMA7Q9Y2S6 64 aaKnown RBP8.18□□□□□ -1.1
RPAIN-201ENST00000327154 EIF4EBP3O60516 100 aaPredicted RBP8.17□□□□□ -1.1
RPAIN-201ENST00000327154 C3orf22Q8N5N4 141 aa8.17□□□□□ -1.1
RPAIN-201ENST00000327154 SPANXB1Q9NS25 103 aaPredicted RBP8.17□□□□□ -1.1
RPAIN-201ENST00000327154 TRBV10-3A0A0K0K1G6 114 aa8.16□□□□□ -1.1
RPAIN-201ENST00000327154 NDUFC2O95298 119 aa8.16□□□□□ -1.1
RPAIN-201ENST00000327154 LINC00308Q8TCZ7 52 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms