RNA–Protein interactions for RNA: ENST00000325438.12

PACS2-201, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACS2, Length 3,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-201ENST00000325438 SETXQ7Z333 2677 aaKnown RBP16.55■□□□□ 0.24
PACS2-201ENST00000325438 C3orf84H3BNL1 204 aa16.54■□□□□ 0.24
PACS2-201ENST00000325438 CD164L2Q6UWJ8 174 aa16.53■□□□□ 0.24
PACS2-201ENST00000325438 VPS13CQ709C8 3753 aa16.53■□□□□ 0.24
PACS2-201ENST00000325438 UNC79Q9P2D8 2635 aa16.52■□□□□ 0.24
PACS2-201ENST00000325438 LINC00575Q6W349 94 aa16.52■□□□□ 0.24
PACS2-201ENST00000325438 C10orf25Q5T742 122 aa16.52■□□□□ 0.23
PACS2-201ENST00000325438 FAM19A3Q7Z5A8 133 aa16.52■□□□□ 0.23
PACS2-201ENST00000325438 NREPQ16612 68 aa16.52■□□□□ 0.23
PACS2-201ENST00000325438 LRCOL1A6NCL2 159 aa16.51■□□□□ 0.23
PACS2-201ENST00000325438 CYSRT1A8MQ03 144 aa16.51■□□□□ 0.23
PACS2-201ENST00000325438 TRBV10-3A0A0K0K1G6 114 aa16.51■□□□□ 0.23
PACS2-201ENST00000325438 SERP1Q9Y6X1 66 aa16.5■□□□□ 0.23
PACS2-201ENST00000325438 CR1P17927 2039 aa16.5■□□□□ 0.23
PACS2-201ENST00000325438 WIPF1O43516 503 aa16.48■□□□□ 0.23
PACS2-201ENST00000325438 TM2D3Q9BRN9 247 aa16.48■□□□□ 0.23
PACS2-201ENST00000325438 IGSF10Q6WRI0 2623 aa16.48■□□□□ 0.23
PACS2-201ENST00000325438 COX7BP24311 80 aa16.48■□□□□ 0.23
PACS2-201ENST00000325438 PRO0628Q9UI54 55 aa16.47■□□□□ 0.23
PACS2-201ENST00000325438 CAMK2N2Q96S95 79 aa16.47■□□□□ 0.23
PACS2-201ENST00000325438 Q5XG85 94 aa16.47■□□□□ 0.23
PACS2-201ENST00000325438 DEFB113Q30KQ7 82 aa16.46■□□□□ 0.23
PACS2-201ENST00000325438 Q6ZQT0 140 aa16.45■□□□□ 0.22
PACS2-201ENST00000325438 A0A096LNT2 108 aa16.45■□□□□ 0.22
PACS2-201ENST00000325438 OBSCN-AS1Q96MR7 158 aa16.45■□□□□ 0.22
PACS2-201ENST00000325438 LINC00474Q9P2X8 69 aa16.45■□□□□ 0.22
PACS2-201ENST00000325438 MIFP14174 115 aa16.45■□□□□ 0.22
PACS2-201ENST00000325438 GIG44P09565 113 aaPredicted RBP16.44■□□□□ 0.22
PACS2-201ENST00000325438 CELA1Q9UNI1 258 aa16.44■□□□□ 0.22
PACS2-201ENST00000325438 NANOS2P60321 138 aaKnown RBP16.43■□□□□ 0.22
PACS2-201ENST00000325438 NDUFC2-KCTD14E9PQ53 114 aa16.43■□□□□ 0.22
PACS2-201ENST00000325438 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.43■□□□□ 0.22
PACS2-201ENST00000325438 SMIM26A0A096LP01 95 aa16.42■□□□□ 0.22
PACS2-201ENST00000325438 MUC7Q8TAX7 377 aa16.42■□□□□ 0.22
PACS2-201ENST00000325438 PLAC8L1A1L4L8 177 aa16.41■□□□□ 0.22
PACS2-201ENST00000325438 BPY2O14599 106 aa16.41■□□□□ 0.22
PACS2-201ENST00000325438 PRR4Q16378 134 aa16.41■□□□□ 0.22
PACS2-201ENST00000325438 H7BZZ5 65 aa16.4■□□□□ 0.22
PACS2-201ENST00000325438 LY6G6DO95868 133 aa16.4■□□□□ 0.22
PACS2-201ENST00000325438 SPATA3Q8NHX4 192 aa16.4■□□□□ 0.22
PACS2-201ENST00000325438 IL17DQ8TAD2 202 aa16.4■□□□□ 0.22
PACS2-201ENST00000325438 TRBV7-6A0A0J9YX20 115 aa16.39■□□□□ 0.21
PACS2-201ENST00000325438 V9GYY9 64 aa16.39■□□□□ 0.21
PACS2-201ENST00000325438 ZNF73O43830 326 aaPredicted RBP16.39■□□□□ 0.21
PACS2-201ENST00000325438 ATRQ13535 2644 aa16.38■□□□□ 0.21
PACS2-201ENST00000325438 PDE6GP18545 87 aa16.38■□□□□ 0.21
PACS2-201ENST00000325438 COX17Q14061 63 aa16.37■□□□□ 0.21
PACS2-201ENST00000325438 C1orf195Q5TG92 126 aa16.37■□□□□ 0.21
PACS2-201ENST00000325438 A0A1B0GUV1 79 aa16.34■□□□□ 0.21
PACS2-201ENST00000325438 FUSP35637 526 aaKnown RBP eCLIP16.34■□□□□ 0.21
PACS2-201ENST00000325438 TMEM254Q8TBM7 123 aa16.34■□□□□ 0.21
PACS2-201ENST00000325438 Q8NDZ9 215 aa16.33■□□□□ 0.21
PACS2-201ENST00000325438 IGLV1-51P01701 117 aa16.33■□□□□ 0.2
PACS2-201ENST00000325438 NKAPP1Q8N9T2 125 aa16.33■□□□□ 0.2
PACS2-201ENST00000325438 FAM30AQ9NZY2 134 aa16.32■□□□□ 0.2
PACS2-201ENST00000325438 FASNP49327 2511 aaKnown RBP16.32■□□□□ 0.2
PACS2-201ENST00000325438 KIAA0087Q14695 138 aa16.3■□□□□ 0.2
PACS2-201ENST00000325438 IGKV2D-24A0A075B6R9 120 aa16.29■□□□□ 0.2
PACS2-201ENST00000325438 USP24Q9UPU5 2620 aa16.27■□□□□ 0.2
PACS2-201ENST00000325438 SEC61GP60059 68 aa16.26■□□□□ 0.19
PACS2-201ENST00000325438 UBR5O95071 2799 aaPredicted RBP16.25■□□□□ 0.19
PACS2-201ENST00000325438 HIGD2AQ9BW72 106 aa16.24■□□□□ 0.19
PACS2-201ENST00000325438 CSNK1G2-AS1Q8NCQ2 148 aa16.24■□□□□ 0.19
PACS2-201ENST00000325438 NDUFC1O43677 76 aa16.23■□□□□ 0.19
PACS2-201ENST00000325438 CXCL6P80162 114 aa16.21■□□□□ 0.19
PACS2-201ENST00000325438 SPART-AS1P0CW21 52 aa16.21■□□□□ 0.19
PACS2-201ENST00000325438 TEP1Q99973 2627 aaKnown RBP16.2■□□□□ 0.18
PACS2-201ENST00000325438 LOC110117498A0A087WWA1 95 aa16.2■□□□□ 0.18
PACS2-201ENST00000325438 FSHBP01225 129 aa16.2■□□□□ 0.18
PACS2-201ENST00000325438 LYPD5Q6UWN5 251 aa16.2■□□□□ 0.18
PACS2-201ENST00000325438 LINC00167Q96N53 147 aa16.2■□□□□ 0.18
PACS2-201ENST00000325438 HECTD1Q9ULT8 2610 aa16.2■□□□□ 0.18
PACS2-201ENST00000325438 PRYO14603 147 aa16.19■□□□□ 0.18
PACS2-201ENST00000325438 KLKP1Q107X0 134 aa16.19■□□□□ 0.18
PACS2-201ENST00000325438 C6orf48Q9UBA6 75 aa16.18■□□□□ 0.18
PACS2-201ENST00000325438 RPL37AP8A6NKH3 93 aa16.18■□□□□ 0.18
PACS2-201ENST00000325438 LYRM9A8MSI8 78 aa16.16■□□□□ 0.18
PACS2-201ENST00000325438 APOC4P55056 127 aa16.16■□□□□ 0.18
PACS2-201ENST00000325438 C19orf73Q9NVV2 129 aa16.16■□□□□ 0.18
PACS2-201ENST00000325438 X6R8D5 127 aa16.14■□□□□ 0.17
PACS2-201ENST00000325438 UBE2BP63146 152 aa16.13■□□□□ 0.17
PACS2-201ENST00000325438 H3BQ85 93 aa16.12■□□□□ 0.17
PACS2-201ENST00000325438 ETDCA0A1B0GVM5 59 aa16.12■□□□□ 0.17
PACS2-201ENST00000325438 PSPHP1O15172 72 aa16.11■□□□□ 0.17
PACS2-201ENST00000325438 IGLV6-57P01721 117 aa16.11■□□□□ 0.17
PACS2-201ENST00000325438 LELP1Q5T871 98 aa16.11■□□□□ 0.17
PACS2-201ENST00000325438 M0R378 163 aa16.11■□□□□ 0.17
PACS2-201ENST00000325438 FP248Q71RG6 208 aaPredicted RBP16.11■□□□□ 0.17
PACS2-201ENST00000325438 Q6ZRU5 148 aa16.1■□□□□ 0.17
PACS2-201ENST00000325438 BAHCC1Q9P281 2608 aa16.09■□□□□ 0.17
PACS2-201ENST00000325438 DEFB116Q30KQ4 102 aa16.08■□□□□ 0.17
PACS2-201ENST00000325438 SMIM29Q86T20 159 aa16.08■□□□□ 0.17
PACS2-201ENST00000325438 SMR3AQ99954 134 aa16.07■□□□□ 0.16
PACS2-201ENST00000325438 WFDC10BQ8IUB3 73 aa16.07■□□□□ 0.16
PACS2-201ENST00000325438 ESRGQ1W209 222 aa16.07■□□□□ 0.16
PACS2-201ENST00000325438 ATP5EP56381 51 aaPredicted RBP16.06■□□□□ 0.16
PACS2-201ENST00000325438 WFDC13Q8IUB5 93 aa16.05■□□□□ 0.16
PACS2-201ENST00000325438 BCE1O60756 84 aa16.03■□□□□ 0.16
PACS2-201ENST00000325438 ELOF1P60002 83 aaKnown RBP16.02■□□□□ 0.15
PACS2-201ENST00000325438 FAM229BQ4G0N7 80 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms