RNA–Protein interactions for RNA: ENST00000324677.11

SSH2-202, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-202ENST00000324677 HIGD2AQ9BW72 106 aa11.38□□□□□ -0.59
SSH2-202ENST00000324677 C11orf86A6NJI1 115 aa11.37□□□□□ -0.59
SSH2-202ENST00000324677 HBDP02042 147 aa11.37□□□□□ -0.59
SSH2-202ENST00000324677 LINC00614P0C842 121 aa11.37□□□□□ -0.59
SSH2-202ENST00000324677 SFTA2Q6UW10 78 aa11.37□□□□□ -0.59
SSH2-202ENST00000324677 TMEM170BQ5T4T1 132 aa11.36□□□□□ -0.59
SSH2-202ENST00000324677 C18orf32Q8TCD1 76 aa11.36□□□□□ -0.59
SSH2-202ENST00000324677 PMCHL1Q16048 86 aa11.35□□□□□ -0.59
SSH2-202ENST00000324677 PPDPFQ9H3Y8 114 aa11.35□□□□□ -0.59
SSH2-202ENST00000324677 SPAG11AQ6PDA7 123 aa11.34□□□□□ -0.59
SSH2-202ENST00000324677 BAGE3Q86Y29 109 aa11.34□□□□□ -0.59
SSH2-202ENST00000324677 SPRR4Q96PI1 79 aa11.34□□□□□ -0.59
SSH2-202ENST00000324677 LINC00158P58513 81 aa11.33□□□□□ -0.6
SSH2-202ENST00000324677 IFITM2Q01629 132 aa11.33□□□□□ -0.6
SSH2-202ENST00000324677 RPS10P5Q9NQ39 176 aa11.32□□□□□ -0.6
SSH2-202ENST00000324677 RHEBQ15382 184 aa11.31□□□□□ -0.6
SSH2-202ENST00000324677 C10orf91Q5T1B1 145 aa11.31□□□□□ -0.6
SSH2-202ENST00000324677 TRAPPC1Q9Y5R8 145 aa11.31□□□□□ -0.6
SSH2-202ENST00000324677 A0A0U1RRA0 63 aa11.3□□□□□ -0.6
SSH2-202ENST00000324677 FP248Q71RG6 208 aaPredicted RBP11.29□□□□□ -0.6
SSH2-202ENST00000324677 CHTOPQ9Y3Y2 248 aaKnown RBP11.29□□□□□ -0.6
SSH2-202ENST00000324677 ZNF706Q9Y5V0 76 aaPredicted RBP11.29□□□□□ -0.6
SSH2-202ENST00000324677 TMEM223A0PJW6 202 aa11.27□□□□□ -0.61
SSH2-202ENST00000324677 C4orf48Q5BLP8 95 aa11.27□□□□□ -0.61
SSH2-202ENST00000324677 COMMD7Q86VX2 200 aa11.27□□□□□ -0.61
SSH2-202ENST00000324677 PRYO14603 147 aa11.26□□□□□ -0.61
SSH2-202ENST00000324677 SMIM13P0DJ93 91 aa11.25□□□□□ -0.61
SSH2-202ENST00000324677 LINC00337Q8N6G1 96 aa11.25□□□□□ -0.61
SSH2-202ENST00000324677 DAND5Q8N907 189 aa11.25□□□□□ -0.61
SSH2-202ENST00000324677 Q8NBF4 154 aa11.25□□□□□ -0.61
SSH2-202ENST00000324677 SPRR1AP35321 89 aa11.24□□□□□ -0.61
SSH2-202ENST00000324677 BOD1L2Q8IYS8 172 aa11.24□□□□□ -0.61
SSH2-202ENST00000324677 ATP6V1G1O75348 118 aa11.23□□□□□ -0.61
SSH2-202ENST00000324677 SMCR5Q8TEV8 140 aa11.23□□□□□ -0.61
SSH2-202ENST00000324677 KCNQ1DNQ9H478 68 aa11.23□□□□□ -0.61
SSH2-202ENST00000324677 TRAV12-1A0A0B4J245 112 aa11.22□□□□□ -0.61
SSH2-202ENST00000324677 NCR3O14931 201 aa11.22□□□□□ -0.61
SSH2-202ENST00000324677 KRTAP13-3Q3SY46 172 aa11.22□□□□□ -0.61
SSH2-202ENST00000324677 KRTAP4-16G5E9R7 235 aaPredicted RBP11.21□□□□□ -0.61
SSH2-202ENST00000324677 MEIG1Q5JSS6 88 aa11.21□□□□□ -0.61
SSH2-202ENST00000324677 MIR7-3HGQ8N6C7 128 aa11.21□□□□□ -0.61
SSH2-202ENST00000324677 ETDCA0A1B0GVM5 59 aa11.2□□□□□ -0.62
SSH2-202ENST00000324677 KRTAP9-6A0A140TA67 174 aa11.19□□□□□ -0.62
SSH2-202ENST00000324677 SPINK1P00995 79 aa11.19□□□□□ -0.62
SSH2-202ENST00000324677 IFI27L1Q96BM0 104 aa11.19□□□□□ -0.62
SSH2-202ENST00000324677 HERV-K104P63124 156 aa11.18□□□□□ -0.62
SSH2-202ENST00000324677 LINC00483Q53H64 154 aa11.18□□□□□ -0.62
SSH2-202ENST00000324677 TRBV10-3A0A0K0K1G6 114 aa11.17□□□□□ -0.62
SSH2-202ENST00000324677 ASB16-AS1Q495Z4 193 aa11.17□□□□□ -0.62
SSH2-202ENST00000324677 CHCHD1Q96BP2 118 aaKnown RBP11.17□□□□□ -0.62
SSH2-202ENST00000324677 LINC00587B1AMM8 73 aa11.15□□□□□ -0.62
SSH2-202ENST00000324677 GAGE2AQ6NT46 116 aa11.14□□□□□ -0.63
SSH2-202ENST00000324677 NDUFA12Q9UI09 145 aa11.14□□□□□ -0.63
SSH2-202ENST00000324677 B5MCH6 92 aa11.13□□□□□ -0.63
SSH2-202ENST00000324677 S100A12P80511 92 aa11.13□□□□□ -0.63
SSH2-202ENST00000324677 MYMXA0A1B0GTQ4 84 aa11.12□□□□□ -0.63
SSH2-202ENST00000324677 APOC3P02656 99 aa11.12□□□□□ -0.63
SSH2-202ENST00000324677 MAP1LC3CQ9BXW4 147 aa11.12□□□□□ -0.63
SSH2-202ENST00000324677 IGLV9-49A0A0B4J1Y8 123 aa11.11□□□□□ -0.63
SSH2-202ENST00000324677 ERC2-IT1O76042 136 aa11.11□□□□□ -0.63
SSH2-202ENST00000324677 MOBPQ13875 183 aa11.11□□□□□ -0.63
SSH2-202ENST00000324677 KRTAP4-1Q9BYQ7 146 aa11.11□□□□□ -0.63
SSH2-202ENST00000324677 SEC61BP60468 96 aaKnown RBP11.1□□□□□ -0.63
SSH2-202ENST00000324677 RPS29P62273 56 aaKnown RBP11.1□□□□□ -0.63
SSH2-202ENST00000324677 SSBP3-AS1Q7Z2R9 100 aa11.1□□□□□ -0.63
SSH2-202ENST00000324677 LOC107984156A0A0G2JMH3 177 aa11.09□□□□□ -0.63
SSH2-202ENST00000324677 SNAPINO95295 136 aa11.09□□□□□ -0.63
SSH2-202ENST00000324677 ARL17AQ8IVW1 177 aa11.09□□□□□ -0.63
SSH2-202ENST00000324677 Q8N377 158 aa11.09□□□□□ -0.63
SSH2-202ENST00000324677 DDTP30046 118 aa11.08□□□□□ -0.64
SSH2-202ENST00000324677 LINC01547P58512 204 aaPredicted RBP11.08□□□□□ -0.64
SSH2-202ENST00000324677 TSPEAR-AS2P59090 65 aa11.08□□□□□ -0.64
SSH2-202ENST00000324677 SVBPQ8N300 66 aa11.08□□□□□ -0.64
SSH2-202ENST00000324677 FAM19A2Q8N3H0 131 aa11.08□□□□□ -0.64
SSH2-202ENST00000324677 YPEL4Q96NS1 127 aa11.08□□□□□ -0.64
SSH2-202ENST00000324677 Q9BRP9 147 aa11.08□□□□□ -0.64
SSH2-202ENST00000324677 TRBV10-2A0A0K0K1G8 114 aa11.07□□□□□ -0.64
SSH2-202ENST00000324677 HSBP1O75506 76 aa11.06□□□□□ -0.64
SSH2-202ENST00000324677 H0Y8G0 127 aa11.05□□□□□ -0.64
SSH2-202ENST00000324677 LEPROTO15243 131 aa11.05□□□□□ -0.64
SSH2-202ENST00000324677 NDUFA5Q16718 116 aa11.05□□□□□ -0.64
SSH2-202ENST00000324677 Q6ZRX8 168 aa11.05□□□□□ -0.64
SSH2-202ENST00000324677 SLC25A20O43772 301 aa11.04□□□□□ -0.64
SSH2-202ENST00000324677 SPANXB1Q9NS25 103 aaPredicted RBP11.03□□□□□ -0.64
SSH2-202ENST00000324677 IGLV6-57P01721 117 aa11.01□□□□□ -0.65
SSH2-202ENST00000324677 J3QQQ9 107 aa11□□□□□ -0.65
SSH2-202ENST00000324677 NDUFC2O95298 119 aa11□□□□□ -0.65
SSH2-202ENST00000324677 XP32Q5T750 250 aa11□□□□□ -0.65
SSH2-202ENST00000324677 MIEN1Q9BRT3 115 aa11□□□□□ -0.65
SSH2-202ENST00000324677 LEPROTL1O95214 131 aa10.99□□□□□ -0.65
SSH2-202ENST00000324677 PLNP26678 52 aa10.99□□□□□ -0.65
SSH2-202ENST00000324677 S100A7L2Q5SY68 101 aa10.99□□□□□ -0.65
SSH2-202ENST00000324677 NMUP48645 174 aa10.98□□□□□ -0.65
SSH2-202ENST00000324677 JOSD1Q15040 202 aaPredicted RBP10.98□□□□□ -0.65
SSH2-202ENST00000324677 C9orf153Q5TBE3 101 aa10.98□□□□□ -0.65
SSH2-202ENST00000324677 TRAV23DV6A0A075B6W5 121 aa10.97□□□□□ -0.65
SSH2-202ENST00000324677 HERVK_113P61574 105 aa10.96□□□□□ -0.65
SSH2-202ENST00000324677 LCE2DQ5TA82 110 aaPredicted RBP10.96□□□□□ -0.65
SSH2-202ENST00000324677 DPM2O94777 84 aa10.95□□□□□ -0.66
SSH2-202ENST00000324677 LGALS3P17931 250 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms