RNA–Protein interactions for RNA: ENST00000323418.10

ME3-201, Transcript of malic enzyme 3, humanhuman

TSL 5 BASIC

Gene ME3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-201ENST00000323418 TMEM223A0PJW6 202 aa12.29□□□□□ -0.44
ME3-201ENST00000323418 APOC3P02656 99 aa12.29□□□□□ -0.44
ME3-201ENST00000323418 MUC17Q685J3 4493 aa12.29□□□□□ -0.44
ME3-201ENST00000323418 LINC00304Q8N9R0 145 aa12.28□□□□□ -0.44
ME3-201ENST00000323418 PLEKHB2Q96CS7 222 aa12.28□□□□□ -0.44
ME3-201ENST00000323418 TRAV12-1A0A0B4J245 112 aa12.27□□□□□ -0.45
ME3-201ENST00000323418 SNAPINO95295 136 aa12.26□□□□□ -0.45
ME3-201ENST00000323418 RETNLBQ9BQ08 111 aa12.26□□□□□ -0.45
ME3-201ENST00000323418 SVBPQ8N300 66 aa12.25□□□□□ -0.45
ME3-201ENST00000323418 CHCHD1Q96BP2 118 aaKnown RBP12.25□□□□□ -0.45
ME3-201ENST00000323418 C3orf22Q8N5N4 141 aa12.24□□□□□ -0.45
ME3-201ENST00000323418 IFI27L1Q96BM0 104 aa12.24□□□□□ -0.45
ME3-201ENST00000323418 IGKV2D-26A0A0A0MRZ7 120 aa12.23□□□□□ -0.45
ME3-201ENST00000323418 LINC00158P58513 81 aa12.23□□□□□ -0.45
ME3-201ENST00000323418 A0A0U1RRA0 63 aa12.22□□□□□ -0.45
ME3-201ENST00000323418 CTAG1AP78358 180 aa12.22□□□□□ -0.45
ME3-201ENST00000323418 CBLN2Q8IUK8 224 aa12.22□□□□□ -0.45
ME3-201ENST00000323418 SMIM13P0DJ93 91 aa12.2□□□□□ -0.46
ME3-201ENST00000323418 NDUFA5Q16718 116 aa12.2□□□□□ -0.46
ME3-201ENST00000323418 SPRR4Q96PI1 79 aa12.19□□□□□ -0.46
ME3-201ENST00000323418 HIGD2AQ9BW72 106 aa12.19□□□□□ -0.46
ME3-201ENST00000323418 SPRR1AP35321 89 aa12.18□□□□□ -0.46
ME3-201ENST00000323418 TPRXLQ17RH7 258 aa12.18□□□□□ -0.46
ME3-201ENST00000323418 KRTAP4-16G5E9R7 235 aaPredicted RBP12.17□□□□□ -0.46
ME3-201ENST00000323418 PRYO14603 147 aa12.16□□□□□ -0.46
ME3-201ENST00000323418 FAM19A2Q8N3H0 131 aa12.16□□□□□ -0.46
ME3-201ENST00000323418 MIR7-3HGQ8N6C7 128 aa12.16□□□□□ -0.46
ME3-201ENST00000323418 FAT4Q6V0I7 4981 aa12.15□□□□□ -0.46
ME3-201ENST00000323418 BOD1L2Q8IYS8 172 aa12.15□□□□□ -0.46
ME3-201ENST00000323418 LINC00310P59036 64 aa12.14□□□□□ -0.47
ME3-201ENST00000323418 HERV-K104P63124 156 aa12.14□□□□□ -0.47
ME3-201ENST00000323418 MEIG1Q5JSS6 88 aa12.14□□□□□ -0.47
ME3-201ENST00000323418 LINC00337Q8N6G1 96 aa12.14□□□□□ -0.47
ME3-201ENST00000323418 KCNQ1DNQ9H478 68 aa12.14□□□□□ -0.47
ME3-201ENST00000323418 NCR3O14931 201 aa12.13□□□□□ -0.47
ME3-201ENST00000323418 TSPEAR-AS2P59090 65 aa12.13□□□□□ -0.47
ME3-201ENST00000323418 IGLV7-46A0A075B6I9 117 aa12.12□□□□□ -0.47
ME3-201ENST00000323418 HSBP1O75506 76 aa12.12□□□□□ -0.47
ME3-201ENST00000323418 NDUFA12Q9UI09 145 aa12.12□□□□□ -0.47
ME3-201ENST00000323418 A0A0U1RQV1 116 aa12.1□□□□□ -0.47
ME3-201ENST00000323418 LCE2AQ5TA79 106 aaPredicted RBP12.1□□□□□ -0.47
ME3-201ENST00000323418 TRBV10-3A0A0K0K1G6 114 aa12.09□□□□□ -0.47
ME3-201ENST00000323418 SMCR5Q8TEV8 140 aa12.09□□□□□ -0.47
ME3-201ENST00000323418 LOC107984156A0A0G2JMH3 177 aa12.08□□□□□ -0.48
ME3-201ENST00000323418 ATP6V1G1O75348 118 aa12.08□□□□□ -0.48
ME3-201ENST00000323418 SPAG11AQ6PDA7 123 aa12.08□□□□□ -0.48
ME3-201ENST00000323418 ARL17AQ8IVW1 177 aa12.08□□□□□ -0.48
ME3-201ENST00000323418 ZNF706Q9Y5V0 76 aaPredicted RBP12.08□□□□□ -0.48
ME3-201ENST00000323418 MYMXA0A1B0GTQ4 84 aa12.07□□□□□ -0.48
ME3-201ENST00000323418 LINC00587B1AMM8 73 aa12.07□□□□□ -0.48
ME3-201ENST00000323418 TRGC2P03986 189 aa12.07□□□□□ -0.48
ME3-201ENST00000323418 LINC00483Q53H64 154 aa12.06□□□□□ -0.48
ME3-201ENST00000323418 CDIP1Q9H305 208 aa12.06□□□□□ -0.48
ME3-201ENST00000323418 H0Y8G0 127 aa12.05□□□□□ -0.48
ME3-201ENST00000323418 LEPROTO15243 131 aa12.05□□□□□ -0.48
ME3-201ENST00000323418 SERF1AO75920 110 aa12.05□□□□□ -0.48
ME3-201ENST00000323418 PPDPFQ9H3Y8 114 aa12.05□□□□□ -0.48
ME3-201ENST00000323418 LEPROTL1O95214 131 aa12.04□□□□□ -0.48
ME3-201ENST00000323418 DAND5Q8N907 189 aa12.04□□□□□ -0.48
ME3-201ENST00000323418 ETDCA0A1B0GVM5 59 aa12.03□□□□□ -0.48
ME3-201ENST00000323418 B5MCH6 92 aa12.03□□□□□ -0.48
ME3-201ENST00000323418 Q8NBF4 154 aa12.03□□□□□ -0.48
ME3-201ENST00000323418 MAP1LC3CQ9BXW4 147 aa12.03□□□□□ -0.48
ME3-201ENST00000323418 TRBV10-2A0A0K0K1G8 114 aa12.01□□□□□ -0.49
ME3-201ENST00000323418 ERC2-IT1O76042 136 aa12.01□□□□□ -0.49
ME3-201ENST00000323418 FP248Q71RG6 208 aaPredicted RBP12.01□□□□□ -0.49
ME3-201ENST00000323418 PLNP26678 52 aa12□□□□□ -0.49
ME3-201ENST00000323418 J3QQQ9 107 aa11.99□□□□□ -0.49
ME3-201ENST00000323418 Q9BRP9 147 aa11.99□□□□□ -0.49
ME3-201ENST00000323418 DDTP30046 118 aa11.98□□□□□ -0.49
ME3-201ENST00000323418 PMCHL2Q9BQD1 86 aa11.98□□□□□ -0.49
ME3-201ENST00000323418 DPM2O94777 84 aa11.97□□□□□ -0.49
ME3-201ENST00000323418 KRTAP13-3Q3SY46 172 aa11.97□□□□□ -0.49
ME3-201ENST00000323418 NMUP48645 174 aa11.96□□□□□ -0.49
ME3-201ENST00000323418 C4orf48Q5BLP8 95 aa11.96□□□□□ -0.49
ME3-201ENST00000323418 SOSTDC1Q6X4U4 206 aa11.96□□□□□ -0.49
ME3-201ENST00000323418 SPANXB1Q9NS25 103 aaPredicted RBP11.96□□□□□ -0.49
ME3-201ENST00000323418 HSPB8Q9UJY1 196 aa11.96□□□□□ -0.49
ME3-201ENST00000323418 EIF4EBP3O60516 100 aaPredicted RBP11.95□□□□□ -0.5
ME3-201ENST00000323418 NDUFC2O95298 119 aa11.95□□□□□ -0.5
ME3-201ENST00000323418 SPINK1P00995 79 aa11.95□□□□□ -0.5
ME3-201ENST00000323418 IGLV6-57P01721 117 aa11.95□□□□□ -0.5
ME3-201ENST00000323418 IGKCP01834 107 aa11.95□□□□□ -0.5
ME3-201ENST00000323418 FABP4P15090 132 aa11.95□□□□□ -0.5
ME3-201ENST00000323418 GAGE2AQ6NT46 116 aa11.95□□□□□ -0.5
ME3-201ENST00000323418 Q6ZRX8 168 aa11.95□□□□□ -0.5
ME3-201ENST00000323418 COLCA2A8K830 154 aa11.93□□□□□ -0.5
ME3-201ENST00000323418 HERVK_113P61574 105 aa11.93□□□□□ -0.5
ME3-201ENST00000323418 KRTAP9-2Q9BYQ4 174 aa11.93□□□□□ -0.5
ME3-201ENST00000323418 S100A12P80511 92 aa11.92□□□□□ -0.5
ME3-201ENST00000323418 MOBPQ13875 183 aa11.92□□□□□ -0.5
ME3-201ENST00000323418 LGALS3P17931 250 aaKnown RBP11.91□□□□□ -0.5
ME3-201ENST00000323418 ADAMTSL4-AS1Q5T5F5 129 aa11.91□□□□□ -0.5
ME3-201ENST00000323418 RPS29P62273 56 aaKnown RBP11.9□□□□□ -0.5
ME3-201ENST00000323418 SSBP3-AS1Q7Z2R9 100 aa11.9□□□□□ -0.5
ME3-201ENST00000323418 IGLV9-49A0A0B4J1Y8 123 aa11.89□□□□□ -0.51
ME3-201ENST00000323418 A0A0J9YXY3 114 aa11.89□□□□□ -0.51
ME3-201ENST00000323418 Q8N377 158 aa11.89□□□□□ -0.51
ME3-201ENST00000323418 MIEN1Q9BRT3 115 aa11.89□□□□□ -0.51
ME3-201ENST00000323418 E9PLD3 99 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms