RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 MAPK1IP1LQ8NDC0 245 aa5.07□□□□□ -1.6
SMC1A-201ENST00000322213 HCG22E2RYF7 251 aa5.06□□□□□ -1.6
SMC1A-201ENST00000322213 Q8N9L7 120 aa5.06□□□□□ -1.6
SMC1A-201ENST00000322213 LINC00208Q96KT6 92 aa5.06□□□□□ -1.6
SMC1A-201ENST00000322213 Q96MF0 132 aa5.06□□□□□ -1.6
SMC1A-201ENST00000322213 DEFB114Q30KQ6 69 aa5.05□□□□□ -1.6
SMC1A-201ENST00000322213 C4orf48Q5BLP8 95 aa5.05□□□□□ -1.6
SMC1A-201ENST00000322213 XAGE1AQ9HD64 81 aa5.05□□□□□ -1.6
SMC1A-201ENST00000322213 A0A1B0GW54 56 aa5.05□□□□□ -1.6
SMC1A-201ENST00000322213 H7BZZ5 65 aa5.05□□□□□ -1.6
SMC1A-201ENST00000322213 DEFB135Q30KP9 77 aa5.05□□□□□ -1.6
SMC1A-201ENST00000322213 WFDC13Q8IUB5 93 aa5.05□□□□□ -1.6
SMC1A-201ENST00000322213 C10orf25Q5T742 122 aa5.05□□□□□ -1.6
SMC1A-201ENST00000322213 VCANP13611 3396 aa5.05□□□□□ -1.6
SMC1A-201ENST00000322213 ESM1Q9NQ30 184 aa5.05□□□□□ -1.6
SMC1A-201ENST00000322213 HTTP42858 3142 aa5.05□□□□□ -1.6
SMC1A-201ENST00000322213 IGKV2-28A0A075B6P5 120 aa5.05□□□□□ -1.6
SMC1A-201ENST00000322213 IGKV2D-28P01615 120 aa5.05□□□□□ -1.6
SMC1A-201ENST00000322213 IGLV1-40P01703 118 aa5.05□□□□□ -1.6
SMC1A-201ENST00000322213 IGHV4-30-2A0A087WSY4 118 aa5.05□□□□□ -1.6
SMC1A-201ENST00000322213 A0A1W2PNU3 283 aaPredicted RBP5.05□□□□□ -1.6
SMC1A-201ENST00000322213 C14orf177Q52M58 125 aa5.05□□□□□ -1.6
SMC1A-201ENST00000322213 FAM218AQ96MZ4 157 aa5.04□□□□□ -1.6
SMC1A-201ENST00000322213 A0A0J9YWU9 116 aa5.04□□□□□ -1.6
SMC1A-201ENST00000322213 C1orf137Q5JT78 98 aa5.04□□□□□ -1.6
SMC1A-201ENST00000322213 LINC00482Q8N8I6 264 aa5.04□□□□□ -1.6
SMC1A-201ENST00000322213 H0Y9P7 68 aa5.04□□□□□ -1.6
SMC1A-201ENST00000322213 ZFHX3Q15911 3703 aa5.04□□□□□ -1.6
SMC1A-201ENST00000322213 PRR3P79522 188 aaKnown RBP5.04□□□□□ -1.6
SMC1A-201ENST00000322213 A0A1B0GUV1 79 aa5.03□□□□□ -1.6
SMC1A-201ENST00000322213 BEAN1Q3B7T3 259 aa5.03□□□□□ -1.6
SMC1A-201ENST00000322213 Q6ZQT0 140 aa5.03□□□□□ -1.6
SMC1A-201ENST00000322213 BOD1L1Q8NFC6 3051 aa5.03□□□□□ -1.6
SMC1A-201ENST00000322213 MYO15AQ9UKN7 3530 aa5.03□□□□□ -1.6
SMC1A-201ENST00000322213 Q5XG85 94 aa5.03□□□□□ -1.6
SMC1A-201ENST00000322213 PDZD2O15018 2839 aa5.03□□□□□ -1.6
SMC1A-201ENST00000322213 COL12A1Q99715 3063 aa5.03□□□□□ -1.6
SMC1A-201ENST00000322213 IGSF10Q6WRI0 2623 aa5.02□□□□□ -1.61
SMC1A-201ENST00000322213 KIF25-AS1Q9Y6Z4 181 aa5.02□□□□□ -1.61
SMC1A-201ENST00000322213 UNC80Q8N2C7 3258 aa5.02□□□□□ -1.61
SMC1A-201ENST00000322213 C2orf48Q96LS8 159 aa5.02□□□□□ -1.61
SMC1A-201ENST00000322213 LINC01600Q96MT4 127 aa5.02□□□□□ -1.61
SMC1A-201ENST00000322213 ZANQ9Y493 2812 aa5.02□□□□□ -1.61
SMC1A-201ENST00000322213 LMO4P61968 165 aa5.02□□□□□ -1.61
SMC1A-201ENST00000322213 ADORA2A-AS1P86434 159 aa5.02□□□□□ -1.61
SMC1A-201ENST00000322213 HIGD2AQ9BW72 106 aa5.02□□□□□ -1.61
SMC1A-201ENST00000322213 Q8N2B8 174 aa5.01□□□□□ -1.61
SMC1A-201ENST00000322213 CELSR2Q9HCU4 2923 aa5.01□□□□□ -1.61
SMC1A-201ENST00000322213 CYSRT1A8MQ03 144 aa5.01□□□□□ -1.61
SMC1A-201ENST00000322213 C9orf116Q5BN46 136 aaPredicted RBP5.01□□□□□ -1.61
SMC1A-201ENST00000322213 TM2D3Q9BRN9 247 aa5.01□□□□□ -1.61
SMC1A-201ENST00000322213 CDSNQ15517 529 aa5.01□□□□□ -1.61
SMC1A-201ENST00000322213 LELP1Q5T871 98 aa5.01□□□□□ -1.61
SMC1A-201ENST00000322213 C11orf71Q6IPW1 123 aa5.01□□□□□ -1.61
SMC1A-201ENST00000322213 C10orf142B7Z368 130 aa5□□□□□ -1.61
SMC1A-201ENST00000322213 NANOS2P60321 138 aaKnown RBP5□□□□□ -1.61
SMC1A-201ENST00000322213 LITAFQ99732 161 aa5□□□□□ -1.61
SMC1A-201ENST00000322213 J3QKU1 62 aa5□□□□□ -1.61
SMC1A-201ENST00000322213 KPRPQ5T749 579 aaPredicted RBP5□□□□□ -1.61
SMC1A-201ENST00000322213 LOC100131303A0A0U1RQF7 123 aa5□□□□□ -1.61
SMC1A-201ENST00000322213 ATP11AUNQ6ZP68 121 aa5□□□□□ -1.61
SMC1A-201ENST00000322213 DEFB4AO15263 64 aa5□□□□□ -1.61
SMC1A-201ENST00000322213 SMIM29Q86T20 159 aa4.99□□□□□ -1.61
SMC1A-201ENST00000322213 C7orf65Q6ZTY9 151 aa4.99□□□□□ -1.61
SMC1A-201ENST00000322213 ZZEF1O43149 2961 aa4.99□□□□□ -1.61
SMC1A-201ENST00000322213 ADGRG4Q8IZF6 3080 aa4.99□□□□□ -1.61
SMC1A-201ENST00000322213 DMDP11532 3685 aa4.99□□□□□ -1.61
SMC1A-201ENST00000322213 ATMQ13315 3056 aa4.99□□□□□ -1.61
SMC1A-201ENST00000322213 SYCNQ0VAF6 134 aa4.99□□□□□ -1.61
SMC1A-201ENST00000322213 LINC00474Q9P2X8 69 aa4.98□□□□□ -1.61
SMC1A-201ENST00000322213 Q6YL49 198 aa4.98□□□□□ -1.61
SMC1A-201ENST00000322213 SPATA3Q8NHX4 192 aa4.98□□□□□ -1.61
SMC1A-201ENST00000322213 PRM2P04554 102 aa4.98□□□□□ -1.61
SMC1A-201ENST00000322213 FLNBO75369 2602 aaKnown RBP4.98□□□□□ -1.61
SMC1A-201ENST00000322213 Q8NA96 180 aa4.98□□□□□ -1.61
SMC1A-201ENST00000322213 EGFEM1PQ0D2K5 195 aa4.98□□□□□ -1.61
SMC1A-201ENST00000322213 H3BPC8 53 aa4.97□□□□□ -1.61
SMC1A-201ENST00000322213 REG3GQ6UW15 175 aa4.97□□□□□ -1.61
SMC1A-201ENST00000322213 Q6ZSN1 163 aa4.97□□□□□ -1.61
SMC1A-201ENST00000322213 DNAJC9-AS1A6NH13 148 aa4.97□□□□□ -1.61
SMC1A-201ENST00000322213 A8MTW9 85 aa4.97□□□□□ -1.61
SMC1A-201ENST00000322213 LINC00315P59091 139 aa4.97□□□□□ -1.61
SMC1A-201ENST00000322213 ZNF706Q9Y5V0 76 aaPredicted RBP4.97□□□□□ -1.61
SMC1A-201ENST00000322213 CYP4F30PQ9H0H9 118 aa4.97□□□□□ -1.61
SMC1A-201ENST00000322213 TP53AIP1Q9HCN2 124 aa4.97□□□□□ -1.61
SMC1A-201ENST00000322213 C1orf64Q8NEQ6 169 aa4.97□□□□□ -1.61
SMC1A-201ENST00000322213 DMXL2Q8TDJ6 3036 aa4.97□□□□□ -1.61
SMC1A-201ENST00000322213 C8orf87E5RJ46 101 aa4.97□□□□□ -1.61
SMC1A-201ENST00000322213 SPAG11AQ6PDA7 123 aa4.97□□□□□ -1.61
SMC1A-201ENST00000322213 COL6A3P12111 3177 aa4.97□□□□□ -1.61
SMC1A-201ENST00000322213 WDFY4Q6ZS81 3184 aa4.97□□□□□ -1.61
SMC1A-201ENST00000322213 RPL37AP8A6NKH3 93 aa4.96□□□□□ -1.61
SMC1A-201ENST00000322213 UNQ6190/PRO20217Q6UXQ8 127 aa4.96□□□□□ -1.61
SMC1A-201ENST00000322213 TRAV10A0A0B4J240 114 aa4.96□□□□□ -1.62
SMC1A-201ENST00000322213 Q6ZRU5 148 aa4.96□□□□□ -1.62
SMC1A-201ENST00000322213 SZT2Q5T011 3432 aa4.96□□□□□ -1.62
SMC1A-201ENST00000322213 IGLV4-60A0A075B6I1 120 aa4.96□□□□□ -1.62
SMC1A-201ENST00000322213 NIPBLQ6KC79 2804 aaeCLIP4.96□□□□□ -1.62
SMC1A-201ENST00000322213 BBC3Q96PG8 261 aaPredicted RBP4.96□□□□□ -1.62
SMC1A-201ENST00000322213 DEFB113Q30KQ7 82 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms