RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 KIR2DL5BQ8NHK3 375 aa11.55□□□□□ -0.56
CLIP4-201ENST00000320081 IGHV3OR16-9A0A0B4J2B5 98 aa11.54□□□□□ -0.56
CLIP4-201ENST00000320081 MPLKIPQ8TAP9 179 aa11.54□□□□□ -0.56
CLIP4-201ENST00000320081 RPL28P46779 137 aaKnown RBP11.53□□□□□ -0.56
CLIP4-201ENST00000320081 NF1P21359 2839 aa11.53□□□□□ -0.56
CLIP4-201ENST00000320081 J3KT08 172 aa11.52□□□□□ -0.56
CLIP4-201ENST00000320081 HRCT1Q6UXD1 115 aa11.52□□□□□ -0.56
CLIP4-201ENST00000320081 WFDC13Q8IUB5 93 aa11.52□□□□□ -0.56
CLIP4-201ENST00000320081 CSDC2Q9Y534 153 aaKnown RBP11.52□□□□□ -0.56
CLIP4-201ENST00000320081 CRYBG3Q68DQ2 2970 aa11.52□□□□□ -0.56
CLIP4-201ENST00000320081 C3orf22Q8N5N4 141 aa11.52□□□□□ -0.57
CLIP4-201ENST00000320081 FAM218AQ96MZ4 157 aa11.52□□□□□ -0.57
CLIP4-201ENST00000320081 LINC00846Q9NV44 126 aa11.51□□□□□ -0.57
CLIP4-201ENST00000320081 Q8N814 137 aa11.51□□□□□ -0.57
CLIP4-201ENST00000320081 LINC01546A6NGU7 62 aa11.5□□□□□ -0.57
CLIP4-201ENST00000320081 C10orf25Q5T742 122 aa11.49□□□□□ -0.57
CLIP4-201ENST00000320081 M0QXV9 152 aa11.48□□□□□ -0.57
CLIP4-201ENST00000320081 TRAV10A0A0B4J240 114 aa11.48□□□□□ -0.57
CLIP4-201ENST00000320081 M0R378 163 aa11.48□□□□□ -0.57
CLIP4-201ENST00000320081 PDE6GP18545 87 aa11.48□□□□□ -0.57
CLIP4-201ENST00000320081 SPINK6Q6UWN8 80 aa11.48□□□□□ -0.57
CLIP4-201ENST00000320081 IGLV5-39A0A0G2JS06 123 aa11.47□□□□□ -0.57
CLIP4-201ENST00000320081 DEFB116Q30KQ4 102 aa11.47□□□□□ -0.57
CLIP4-201ENST00000320081 NDUFB1O75438 58 aa11.46□□□□□ -0.57
CLIP4-201ENST00000320081 MP68P56378 58 aa11.46□□□□□ -0.57
CLIP4-201ENST00000320081 Q8N9L7 120 aa11.46□□□□□ -0.57
CLIP4-201ENST00000320081 LYPD5Q6UWN5 251 aa11.46□□□□□ -0.58
CLIP4-201ENST00000320081 Q6ZRU5 148 aa11.46□□□□□ -0.58
CLIP4-201ENST00000320081 LOC107984640A0A0U1RRK4 108 aa11.45□□□□□ -0.58
CLIP4-201ENST00000320081 SERP2Q8N6R1 65 aa11.45□□□□□ -0.58
CLIP4-201ENST00000320081 HIVEP1P15822 2718 aa11.44□□□□□ -0.58
CLIP4-201ENST00000320081 FBN2P35556 2912 aa11.44□□□□□ -0.58
CLIP4-201ENST00000320081 TMEM258P61165 79 aa11.43□□□□□ -0.58
CLIP4-201ENST00000320081 COX7CP15954 63 aa11.43□□□□□ -0.58
CLIP4-201ENST00000320081 Q6Q795 121 aa11.42□□□□□ -0.58
CLIP4-201ENST00000320081 C16orf95Q9H693 158 aa11.41□□□□□ -0.58
CLIP4-201ENST00000320081 A0A1B0GUV1 79 aa11.41□□□□□ -0.58
CLIP4-201ENST00000320081 COX17Q14061 63 aa11.41□□□□□ -0.58
CLIP4-201ENST00000320081 IGLV9-49A0A0B4J1Y8 123 aa11.4□□□□□ -0.58
CLIP4-201ENST00000320081 BRK1Q8WUW1 75 aa11.4□□□□□ -0.58
CLIP4-201ENST00000320081 X6R8D5 127 aa11.4□□□□□ -0.58
CLIP4-201ENST00000320081 FAM236DA0A1B0GTK5 79 aa11.4□□□□□ -0.59
CLIP4-201ENST00000320081 FAM236CP0DP71 79 aa11.4□□□□□ -0.59
CLIP4-201ENST00000320081 FAM30AQ9NZY2 134 aa11.4□□□□□ -0.59
CLIP4-201ENST00000320081 IGKV4-1P06312 121 aa11.39□□□□□ -0.59
CLIP4-201ENST00000320081 DCHS2Q6V1P9 2916 aa11.39□□□□□ -0.59
CLIP4-201ENST00000320081 ZNF575Q86XF7 245 aa11.39□□□□□ -0.59
CLIP4-201ENST00000320081 FAM240AA0A1B0GVK7 77 aa11.38□□□□□ -0.59
CLIP4-201ENST00000320081 EGFEM1PQ0D2K5 195 aa11.38□□□□□ -0.59
CLIP4-201ENST00000320081 B9D2Q9BPU9 175 aa11.38□□□□□ -0.59
CLIP4-201ENST00000320081 IMUPQ9GZP8 106 aa11.38□□□□□ -0.59
CLIP4-201ENST00000320081 NHLRC4P0CG21 123 aaPredicted RBP11.38□□□□□ -0.59
CLIP4-201ENST00000320081 LITAFQ99732 161 aa11.37□□□□□ -0.59
CLIP4-201ENST00000320081 STAB2Q8WWQ8 2551 aa11.37□□□□□ -0.59
CLIP4-201ENST00000320081 A0A0U1RQV1 116 aa11.35□□□□□ -0.59
CLIP4-201ENST00000320081 ESRGQ1W209 222 aa11.35□□□□□ -0.59
CLIP4-201ENST00000320081 PRLHP81277 87 aa11.35□□□□□ -0.59
CLIP4-201ENST00000320081 NDUFC2-KCTD14E9PQ53 114 aa11.35□□□□□ -0.59
CLIP4-201ENST00000320081 LINC00575Q6W349 94 aa11.35□□□□□ -0.59
CLIP4-201ENST00000320081 SBSPONQ8IVN8 264 aa11.35□□□□□ -0.59
CLIP4-201ENST00000320081 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.34□□□□□ -0.59
CLIP4-201ENST00000320081 H3BQ85 93 aa11.34□□□□□ -0.59
CLIP4-201ENST00000320081 Q6JHZ5 121 aa11.34□□□□□ -0.59
CLIP4-201ENST00000320081 C1orf137Q5JT78 98 aa11.33□□□□□ -0.6
CLIP4-201ENST00000320081 ATP5EP2Q5VTU8 51 aa11.33□□□□□ -0.6
CLIP4-201ENST00000320081 FSHBP01225 129 aa11.33□□□□□ -0.6
CLIP4-201ENST00000320081 FAM19A3Q7Z5A8 133 aa11.33□□□□□ -0.6
CLIP4-201ENST00000320081 IGLV5-45A0A087WSX0 123 aa11.33□□□□□ -0.6
CLIP4-201ENST00000320081 LY6G6CO95867 125 aa11.32□□□□□ -0.6
CLIP4-201ENST00000320081 CUBNO60494 3623 aa11.31□□□□□ -0.6
CLIP4-201ENST00000320081 C6orf48Q9UBA6 75 aa11.31□□□□□ -0.6
CLIP4-201ENST00000320081 Q6ZVQ6 151 aa11.3□□□□□ -0.6
CLIP4-201ENST00000320081 A0A096LNT2 108 aa11.3□□□□□ -0.6
CLIP4-201ENST00000320081 KLK9Q2XQG4 91 aa11.29□□□□□ -0.6
CLIP4-201ENST00000320081 PLAC8L1A1L4L8 177 aa11.28□□□□□ -0.6
CLIP4-201ENST00000320081 GIG44P09565 113 aaPredicted RBP11.28□□□□□ -0.6
CLIP4-201ENST00000320081 A0A087WSZ3 146 aa11.28□□□□□ -0.6
CLIP4-201ENST00000320081 C14orf177Q52M58 125 aa11.28□□□□□ -0.6
CLIP4-201ENST00000320081 MUC7Q8TAX7 377 aa11.28□□□□□ -0.6
CLIP4-201ENST00000320081 PKIGQ9Y2B9 76 aa11.28□□□□□ -0.6
CLIP4-201ENST00000320081 DHRS4-AS1Q9P1J3 65 aa11.27□□□□□ -0.6
CLIP4-201ENST00000320081 SPTSSBQ8NFR3 76 aa11.25□□□□□ -0.61
CLIP4-201ENST00000320081 NDUFC2O95298 119 aa11.25□□□□□ -0.61
CLIP4-201ENST00000320081 CHKB-CPT1BH3BT56 60 aa11.24□□□□□ -0.61
CLIP4-201ENST00000320081 C4orf48Q5BLP8 95 aa11.24□□□□□ -0.61
CLIP4-201ENST00000320081 KRTAP24-1Q3LI83 254 aa11.24□□□□□ -0.61
CLIP4-201ENST00000320081 TRBV7-7A0A0K0K1E9 115 aa11.23□□□□□ -0.61
CLIP4-201ENST00000320081 LINC01547P58512 204 aaPredicted RBP11.23□□□□□ -0.61
CLIP4-201ENST00000320081 SPATA3Q8NHX4 192 aa11.23□□□□□ -0.61
CLIP4-201ENST00000320081 Q8NAQ8 132 aa11.22□□□□□ -0.61
CLIP4-201ENST00000320081 C7orf33Q8WU49 177 aa11.22□□□□□ -0.61
CLIP4-201ENST00000320081 NIPBLQ6KC79 2804 aaeCLIP11.22□□□□□ -0.61
CLIP4-201ENST00000320081 SMG1Q96Q15 3661 aaKnown RBP11.21□□□□□ -0.61
CLIP4-201ENST00000320081 MRPL55Q7Z7F7 128 aaKnown RBP11.21□□□□□ -0.62
CLIP4-201ENST00000320081 CSNK1G2-AS1Q8NCQ2 148 aa11.21□□□□□ -0.62
CLIP4-201ENST00000320081 LINC00208Q96KT6 92 aa11.21□□□□□ -0.62
CLIP4-201ENST00000320081 KIAA0087Q14695 138 aa11.2□□□□□ -0.62
CLIP4-201ENST00000320081 REG3GQ6UW15 175 aa11.2□□□□□ -0.62
CLIP4-201ENST00000320081 C22orf24Q9Y442 160 aa11.2□□□□□ -0.62
CLIP4-201ENST00000320081 SMCR5Q8TEV8 140 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms