RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 COX6A2Q02221 97 aa5.91□□□□□ -1.46
PDLIM5-201ENST00000317968 Q6ZRP5 223 aa5.91□□□□□ -1.46
PDLIM5-201ENST00000317968 CASC2Q6XLA1 102 aa5.91□□□□□ -1.46
PDLIM5-201ENST00000317968 ZNF73O43830 326 aaPredicted RBP5.9□□□□□ -1.46
PDLIM5-201ENST00000317968 LINC00308Q8TCZ7 52 aa5.9□□□□□ -1.46
PDLIM5-201ENST00000317968 XGP55808 180 aa5.9□□□□□ -1.47
PDLIM5-201ENST00000317968 RPL37AP61513 92 aaKnown RBP5.9□□□□□ -1.47
PDLIM5-201ENST00000317968 CIRBP-AS1Q8TBR5 109 aa5.9□□□□□ -1.47
PDLIM5-201ENST00000317968 NBEAQ8NFP9 2946 aa5.9□□□□□ -1.47
PDLIM5-201ENST00000317968 SETXQ7Z333 2677 aaKnown RBP5.9□□□□□ -1.47
PDLIM5-201ENST00000317968 USP34Q70CQ2 3546 aa5.9□□□□□ -1.47
PDLIM5-201ENST00000317968 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.9□□□□□ -1.47
PDLIM5-201ENST00000317968 TAX1BP3O14907 124 aa5.89□□□□□ -1.47
PDLIM5-201ENST00000317968 LINC00526Q96FQ7 95 aa5.89□□□□□ -1.47
PDLIM5-201ENST00000317968 IGKV4-1P06312 121 aa5.89□□□□□ -1.47
PDLIM5-201ENST00000317968 FOXI1Q12951 378 aa5.88□□□□□ -1.47
PDLIM5-201ENST00000317968 SPINK6Q6UWN8 80 aa5.88□□□□□ -1.47
PDLIM5-201ENST00000317968 BPY2O14599 106 aa5.88□□□□□ -1.47
PDLIM5-201ENST00000317968 SMIM20Q8N5G0 67 aa5.88□□□□□ -1.47
PDLIM5-201ENST00000317968 HIVEP1P15822 2718 aa5.88□□□□□ -1.47
PDLIM5-201ENST00000317968 H3BT86 120 aa5.88□□□□□ -1.47
PDLIM5-201ENST00000317968 UNQ6190/PRO20217Q6UXQ8 127 aa5.88□□□□□ -1.47
PDLIM5-201ENST00000317968 FAM236DA0A1B0GTK5 79 aa5.87□□□□□ -1.47
PDLIM5-201ENST00000317968 FAM236CP0DP71 79 aa5.87□□□□□ -1.47
PDLIM5-201ENST00000317968 LINC00588Q9Y4M8 146 aa5.87□□□□□ -1.47
PDLIM5-201ENST00000317968 LST1O00453 97 aa5.87□□□□□ -1.47
PDLIM5-201ENST00000317968 KRTAP21-3Q3LHN1 58 aa5.87□□□□□ -1.47
PDLIM5-201ENST00000317968 C6orf99Q4VX62 202 aa5.87□□□□□ -1.47
PDLIM5-201ENST00000317968 NDUFC2O95298 119 aa5.87□□□□□ -1.47
PDLIM5-201ENST00000317968 DNAH10OSP0CZ25 163 aa5.87□□□□□ -1.47
PDLIM5-201ENST00000317968 ANAPC13Q9BS18 74 aa5.87□□□□□ -1.47
PDLIM5-201ENST00000317968 HRCT1Q6UXD1 115 aa5.86□□□□□ -1.47
PDLIM5-201ENST00000317968 ZZEF1O43149 2961 aa5.86□□□□□ -1.47
PDLIM5-201ENST00000317968 TEP1Q99973 2627 aaKnown RBP5.86□□□□□ -1.47
PDLIM5-201ENST00000317968 MUC3AQ02505 3323 aa5.86□□□□□ -1.47
PDLIM5-201ENST00000317968 C9orf116Q5BN46 136 aaPredicted RBP5.86□□□□□ -1.47
PDLIM5-201ENST00000317968 LOC400499M0QZD8 3231 aa5.85□□□□□ -1.47
PDLIM5-201ENST00000317968 TEX49A0A1B0GTD5 131 aa5.85□□□□□ -1.47
PDLIM5-201ENST00000317968 COL6A5A8TX70 2615 aa5.85□□□□□ -1.47
PDLIM5-201ENST00000317968 PRR34Q9NV39 138 aa5.85□□□□□ -1.47
PDLIM5-201ENST00000317968 MAP1AP78559 2803 aaPredicted RBP5.85□□□□□ -1.47
PDLIM5-201ENST00000317968 K7ERJ3 54 aa5.85□□□□□ -1.47
PDLIM5-201ENST00000317968 B5MCH6 92 aa5.85□□□□□ -1.47
PDLIM5-201ENST00000317968 Q9UF83 564 aa5.85□□□□□ -1.47
PDLIM5-201ENST00000317968 CRYGAP11844 174 aa5.84□□□□□ -1.47
PDLIM5-201ENST00000317968 TSPEAR-AS2P59090 65 aa5.84□□□□□ -1.48
PDLIM5-201ENST00000317968 MGAM2Q2M2H8 2515 aa5.83□□□□□ -1.48
PDLIM5-201ENST00000317968 GVQW2A0A096LPI5 108 aaPredicted RBP5.83□□□□□ -1.48
PDLIM5-201ENST00000317968 SPTSSBQ8NFR3 76 aa5.83□□□□□ -1.48
PDLIM5-201ENST00000317968 STAB1Q9NY15 2570 aa5.82□□□□□ -1.48
PDLIM5-201ENST00000317968 Q6ZRU5 148 aa5.82□□□□□ -1.48
PDLIM5-201ENST00000317968 J3KT08 172 aa5.82□□□□□ -1.48
PDLIM5-201ENST00000317968 MYO15AQ9UKN7 3530 aa5.81□□□□□ -1.48
PDLIM5-201ENST00000317968 LRBAP50851 2863 aa5.81□□□□□ -1.48
PDLIM5-201ENST00000317968 Q9BRP9 147 aa5.81□□□□□ -1.48
PDLIM5-201ENST00000317968 C14orf132Q9NPU4 83 aa5.81□□□□□ -1.48
PDLIM5-201ENST00000317968 C22orf24Q9Y442 160 aa5.81□□□□□ -1.48
PDLIM5-201ENST00000317968 CCKP06307 115 aa5.81□□□□□ -1.48
PDLIM5-201ENST00000317968 CLEC2BQ92478 149 aa5.81□□□□□ -1.48
PDLIM5-201ENST00000317968 CELSR3Q9NYQ7 3312 aa5.8□□□□□ -1.48
PDLIM5-201ENST00000317968 ATP5EP2Q5VTU8 51 aa5.8□□□□□ -1.48
PDLIM5-201ENST00000317968 TYMSOSQ8TAI1 123 aa5.8□□□□□ -1.48
PDLIM5-201ENST00000317968 Q6ZQY7 126 aa5.8□□□□□ -1.48
PDLIM5-201ENST00000317968 TRBV10-3A0A0K0K1G6 114 aa5.79□□□□□ -1.48
PDLIM5-201ENST00000317968 ENHOQ6UWT2 76 aa5.78□□□□□ -1.48
PDLIM5-201ENST00000317968 TEN1Q86WV5 123 aa5.78□□□□□ -1.48
PDLIM5-201ENST00000317968 NDUFV3P56181 108 aaKnown RBP5.78□□□□□ -1.48
PDLIM5-201ENST00000317968 ZANQ9Y493 2812 aa5.78□□□□□ -1.48
PDLIM5-201ENST00000317968 LINC00476Q8WZB0 136 aa5.78□□□□□ -1.48
PDLIM5-201ENST00000317968 APLNQ9ULZ1 77 aa5.78□□□□□ -1.48
PDLIM5-201ENST00000317968 SPEGQ15772 3267 aa5.77□□□□□ -1.49
PDLIM5-201ENST00000317968 EPM2AB3EWF7 344 aa5.77□□□□□ -1.49
PDLIM5-201ENST00000317968 CASC10Q5T4H9 136 aa5.77□□□□□ -1.49
PDLIM5-201ENST00000317968 ETDBQ3ZM63 59 aa5.76□□□□□ -1.49
PDLIM5-201ENST00000317968 ADAMTSL4-AS1Q5T5F5 129 aa5.76□□□□□ -1.49
PDLIM5-201ENST00000317968 SPAG11AQ6PDA7 123 aa5.76□□□□□ -1.49
PDLIM5-201ENST00000317968 SMCR5Q8TEV8 140 aa5.76□□□□□ -1.49
PDLIM5-201ENST00000317968 SMIM11BQ8TCY0 68 aa5.76□□□□□ -1.49
PDLIM5-201ENST00000317968 C5orf47Q569G3 176 aa5.75□□□□□ -1.49
PDLIM5-201ENST00000317968 DCHS1Q96JQ0 3298 aa5.75□□□□□ -1.49
PDLIM5-201ENST00000317968 TRIAP1O43715 76 aa5.75□□□□□ -1.49
PDLIM5-201ENST00000317968 PDZD2O15018 2839 aa5.75□□□□□ -1.49
PDLIM5-201ENST00000317968 A0A087WTM6 91 aa5.75□□□□□ -1.49
PDLIM5-201ENST00000317968 Q8N814 137 aa5.74□□□□□ -1.49
PDLIM5-201ENST00000317968 TENM4Q6N022 2769 aa5.74□□□□□ -1.49
PDLIM5-201ENST00000317968 Q8NBF4 154 aa5.74□□□□□ -1.49
PDLIM5-201ENST00000317968 TACC2O95359 2948 aa5.74□□□□□ -1.49
PDLIM5-201ENST00000317968 BCE1O60756 84 aa5.73□□□□□ -1.49
PDLIM5-201ENST00000317968 FBN2P35556 2912 aa5.73□□□□□ -1.49
PDLIM5-201ENST00000317968 TRBV7-6A0A0J9YX20 115 aa5.73□□□□□ -1.49
PDLIM5-201ENST00000317968 ATOX1O00244 68 aa5.73□□□□□ -1.49
PDLIM5-201ENST00000317968 TMEM258P61165 79 aa5.73□□□□□ -1.49
PDLIM5-201ENST00000317968 LITAFQ99732 161 aa5.73□□□□□ -1.49
PDLIM5-201ENST00000317968 K7ERS5 55 aa5.72□□□□□ -1.49
PDLIM5-201ENST00000317968 KIAA0087Q14695 138 aa5.72□□□□□ -1.49
PDLIM5-201ENST00000317968 PRR4Q16378 134 aa5.72□□□□□ -1.49
PDLIM5-201ENST00000317968 CELSR2Q9HCU4 2923 aa5.72□□□□□ -1.49
PDLIM5-201ENST00000317968 SLPIP03973 132 aa5.72□□□□□ -1.49
PDLIM5-201ENST00000317968 Q6ZVQ6 151 aa5.72□□□□□ -1.49
PDLIM5-201ENST00000317968 IGKV3D-7A0A0C4DH55 119 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms