RNA–Protein interactions for RNA: ENST00000316461.8

TTC9C-202, Transcript of tetratricopeptide repeat domain 9C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC9C, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9C-202ENST00000316461 FSIP2Q5CZC0 6907 aa4.63□□□□□ -1.67
TTC9C-202ENST00000316461 A0A0U1RQV1 116 aa4.63□□□□□ -1.67
TTC9C-202ENST00000316461 TMEM223A0PJW6 202 aa4.63□□□□□ -1.67
TTC9C-202ENST00000316461 HSBP1O75506 76 aa4.63□□□□□ -1.67
TTC9C-202ENST00000316461 NDUFA6P56556 154 aa4.63□□□□□ -1.67
TTC9C-202ENST00000316461 LCE2AQ5TA79 106 aaPredicted RBP4.63□□□□□ -1.67
TTC9C-202ENST00000316461 MRPL55Q7Z7F7 128 aaKnown RBP4.63□□□□□ -1.67
TTC9C-202ENST00000316461 CHTOPQ9Y3Y2 248 aaKnown RBP4.63□□□□□ -1.67
TTC9C-202ENST00000316461 CRYGAP11844 174 aa4.62□□□□□ -1.67
TTC9C-202ENST00000316461 CXCL5P42830 114 aa4.62□□□□□ -1.67
TTC9C-202ENST00000316461 ANAPC11Q9NYG5 84 aa4.62□□□□□ -1.67
TTC9C-202ENST00000316461 ATP6V1G1O75348 118 aa4.61□□□□□ -1.67
TTC9C-202ENST00000316461 LEPROTL1O95214 131 aa4.61□□□□□ -1.67
TTC9C-202ENST00000316461 S100A1P23297 94 aa4.61□□□□□ -1.67
TTC9C-202ENST00000316461 PFN2P35080 140 aa4.61□□□□□ -1.67
TTC9C-202ENST00000316461 Q8NDZ9 215 aa4.61□□□□□ -1.67
TTC9C-202ENST00000316461 LINC00167Q96N53 147 aa4.61□□□□□ -1.67
TTC9C-202ENST00000316461 IGLV5-37A0A075B6J1 123 aa4.6□□□□□ -1.67
TTC9C-202ENST00000316461 IGKV2-28A0A075B6P5 120 aa4.6□□□□□ -1.67
TTC9C-202ENST00000316461 IGKV2D-26A0A0A0MRZ7 120 aa4.6□□□□□ -1.67
TTC9C-202ENST00000316461 LOC100996750A0A140TA64 210 aa4.6□□□□□ -1.67
TTC9C-202ENST00000316461 H3BRM9 83 aa4.6□□□□□ -1.67
TTC9C-202ENST00000316461 BCE1O60756 84 aa4.6□□□□□ -1.67
TTC9C-202ENST00000316461 IGKV2D-28P01615 120 aa4.6□□□□□ -1.67
TTC9C-202ENST00000316461 KRTAP1-4P0C5Y4 121 aa4.6□□□□□ -1.67
TTC9C-202ENST00000316461 KRTAP4-6Q9BYQ5 205 aa4.6□□□□□ -1.67
TTC9C-202ENST00000316461 TSPEAR-AS2P59090 65 aa4.59□□□□□ -1.67
TTC9C-202ENST00000316461 SYS1-DBNDD2H3BUS1 97 aa4.58□□□□□ -1.68
TTC9C-202ENST00000316461 FABP4P15090 132 aa4.58□□□□□ -1.68
TTC9C-202ENST00000316461 COX17Q14061 63 aa4.58□□□□□ -1.68
TTC9C-202ENST00000316461 TMEM170BQ5T4T1 132 aa4.58□□□□□ -1.68
TTC9C-202ENST00000316461 LINC01545Q5VT33 79 aa4.58□□□□□ -1.68
TTC9C-202ENST00000316461 FAM19A1Q7Z5A9 133 aa4.58□□□□□ -1.68
TTC9C-202ENST00000316461 RETNLBQ9BQ08 111 aa4.58□□□□□ -1.68
TTC9C-202ENST00000316461 CDIP1Q9H305 208 aa4.58□□□□□ -1.68
TTC9C-202ENST00000316461 TP73-AS1Q9UF72 201 aa4.58□□□□□ -1.68
TTC9C-202ENST00000316461 HSPB8Q9UJY1 196 aa4.58□□□□□ -1.68
TTC9C-202ENST00000316461 A0A087X002 238 aa4.57□□□□□ -1.68
TTC9C-202ENST00000316461 CRCT1Q9UGL9 99 aa4.57□□□□□ -1.68
TTC9C-202ENST00000316461 ERG28Q9UKR5 140 aa4.57□□□□□ -1.68
TTC9C-202ENST00000316461 LOC107984156A0A0G2JMH3 177 aa4.56□□□□□ -1.68
TTC9C-202ENST00000316461 C3orf79P0CE67 100 aa4.56□□□□□ -1.68
TTC9C-202ENST00000316461 VPREB1P12018 145 aa4.56□□□□□ -1.68
TTC9C-202ENST00000316461 C4orf48Q5BLP8 95 aa4.56□□□□□ -1.68
TTC9C-202ENST00000316461 ARL17AQ8IVW1 177 aa4.56□□□□□ -1.68
TTC9C-202ENST00000316461 LINC00304Q8N9R0 145 aa4.56□□□□□ -1.68
TTC9C-202ENST00000316461 PMCHL2Q9BQD1 86 aa4.56□□□□□ -1.68
TTC9C-202ENST00000316461 SND1-IT1Q9HBX3 110 aa4.56□□□□□ -1.68
TTC9C-202ENST00000316461 A0A0U1RRA0 63 aa4.55□□□□□ -1.68
TTC9C-202ENST00000316461 LEPROTO15243 131 aa4.55□□□□□ -1.68
TTC9C-202ENST00000316461 DPM2O94777 84 aa4.55□□□□□ -1.68
TTC9C-202ENST00000316461 IGKCP01834 107 aa4.55□□□□□ -1.68
TTC9C-202ENST00000316461 PLNP26678 52 aa4.55□□□□□ -1.68
TTC9C-202ENST00000316461 PRLHP81277 87 aa4.55□□□□□ -1.68
TTC9C-202ENST00000316461 RPL24P83731 157 aaKnown RBP4.55□□□□□ -1.68
TTC9C-202ENST00000316461 SFTA2Q6UW10 78 aa4.55□□□□□ -1.68
TTC9C-202ENST00000316461 PET117Q6UWS5 81 aa4.55□□□□□ -1.68
TTC9C-202ENST00000316461 KRTAP13-1Q8IUC0 172 aa4.55□□□□□ -1.68
TTC9C-202ENST00000316461 MAP1LC3CQ9BXW4 147 aa4.55□□□□□ -1.68
TTC9C-202ENST00000316461 E9PLD3 99 aa4.54□□□□□ -1.68
TTC9C-202ENST00000316461 LINC00158P58513 81 aa4.54□□□□□ -1.68
TTC9C-202ENST00000316461 HIST3H2BBQ8N257 126 aa4.54□□□□□ -1.68
TTC9C-202ENST00000316461 HIGD2AQ9BW72 106 aa4.54□□□□□ -1.68
TTC9C-202ENST00000316461 NDUFA12Q9UI09 145 aa4.54□□□□□ -1.68
TTC9C-202ENST00000316461 IGLV7-46A0A075B6I9 117 aa4.53□□□□□ -1.68
TTC9C-202ENST00000316461 TMEM238C9JI98 176 aa4.53□□□□□ -1.68
TTC9C-202ENST00000316461 J3QQQ9 107 aa4.53□□□□□ -1.68
TTC9C-202ENST00000316461 EIF4EBP3O60516 100 aaPredicted RBP4.53□□□□□ -1.68
TTC9C-202ENST00000316461 SMIM13P0DJ93 91 aa4.53□□□□□ -1.68
TTC9C-202ENST00000316461 LITAFQ99732 161 aa4.53□□□□□ -1.68
TTC9C-202ENST00000316461 H0Y8G0 127 aa4.52□□□□□ -1.69
TTC9C-202ENST00000316461 HERV-K104P63124 156 aa4.52□□□□□ -1.69
TTC9C-202ENST00000316461 ADAMTSL4-AS1Q5T5F5 129 aa4.52□□□□□ -1.69
TTC9C-202ENST00000316461 LINC00337Q8N6G1 96 aa4.52□□□□□ -1.69
TTC9C-202ENST00000316461 PLEKHB2Q96CS7 222 aa4.52□□□□□ -1.69
TTC9C-202ENST00000316461 HIST1H2BLQ99880 126 aa4.52□□□□□ -1.69
TTC9C-202ENST00000316461 TMEM126AQ9H061 195 aa4.52□□□□□ -1.69
TTC9C-202ENST00000316461 MYMXA0A1B0GTQ4 84 aa4.51□□□□□ -1.69
TTC9C-202ENST00000316461 C5orf52A6NGY3 159 aa4.51□□□□□ -1.69
TTC9C-202ENST00000316461 KRTAP4-16G5E9R7 235 aaPredicted RBP4.51□□□□□ -1.69
TTC9C-202ENST00000316461 NMUP48645 174 aa4.51□□□□□ -1.69
TTC9C-202ENST00000316461 FAM229BQ4G0N7 80 aa4.51□□□□□ -1.69
TTC9C-202ENST00000316461 KRTAP13-2Q52LG2 175 aa4.51□□□□□ -1.69
TTC9C-202ENST00000316461 MEIG1Q5JSS6 88 aa4.51□□□□□ -1.69
TTC9C-202ENST00000316461 SOSTDC1Q6X4U4 206 aa4.51□□□□□ -1.69
TTC9C-202ENST00000316461 MIR7-3HGQ8N6C7 128 aa4.51□□□□□ -1.69
TTC9C-202ENST00000316461 A0A0J9YXY3 114 aa4.5□□□□□ -1.69
TTC9C-202ENST00000316461 SPRR1AP35321 89 aa4.5□□□□□ -1.69
TTC9C-202ENST00000316461 C3orf22Q8N5N4 141 aa4.5□□□□□ -1.69
TTC9C-202ENST00000316461 PPDPFQ9H3Y8 114 aa4.5□□□□□ -1.69
TTC9C-202ENST00000316461 M0R378 163 aa4.49□□□□□ -1.69
TTC9C-202ENST00000316461 S100A12P80511 92 aa4.49□□□□□ -1.69
TTC9C-202ENST00000316461 ANKRD39Q53RE8 183 aa4.49□□□□□ -1.69
TTC9C-202ENST00000316461 TTTY13Q9BZ97 58 aa4.49□□□□□ -1.69
TTC9C-202ENST00000316461 ZNF706Q9Y5V0 76 aaPredicted RBP4.49□□□□□ -1.69
TTC9C-202ENST00000316461 ETDCA0A1B0GVM5 59 aa4.48□□□□□ -1.69
TTC9C-202ENST00000316461 LINC00587B1AMM8 73 aa4.48□□□□□ -1.69
TTC9C-202ENST00000316461 LCE2BO14633 110 aa4.48□□□□□ -1.69
TTC9C-202ENST00000316461 NCR3O14931 201 aa4.48□□□□□ -1.69
TTC9C-202ENST00000316461 SNRPEP62304 92 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms