RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 WIPF1O43516 503 aa11.81□□□□□ -0.52
SCAMP4-201ENST00000316097 GHRHP01286 108 aa11.81□□□□□ -0.52
SCAMP4-201ENST00000316097 FHL2Q14192 279 aa11.81□□□□□ -0.52
SCAMP4-201ENST00000316097 JMJD7-PLA2G4BH0Y9G9 81 aa11.8□□□□□ -0.52
SCAMP4-201ENST00000316097 S100A7L2Q5SY68 101 aa11.8□□□□□ -0.52
SCAMP4-201ENST00000316097 APOC4P55056 127 aa11.8□□□□□ -0.52
SCAMP4-201ENST00000316097 FAM19A1Q7Z5A9 133 aa11.8□□□□□ -0.52
SCAMP4-201ENST00000316097 Q8N814 137 aa11.8□□□□□ -0.52
SCAMP4-201ENST00000316097 LINC00167Q96N53 147 aa11.8□□□□□ -0.52
SCAMP4-201ENST00000316097 NANOS2P60321 138 aaKnown RBP11.79□□□□□ -0.52
SCAMP4-201ENST00000316097 IGHV4-28A0A0C4DH34 117 aa11.79□□□□□ -0.52
SCAMP4-201ENST00000316097 CLPSL2Q6UWE3 100 aa11.79□□□□□ -0.52
SCAMP4-201ENST00000316097 ENHOQ6UWT2 76 aa11.79□□□□□ -0.52
SCAMP4-201ENST00000316097 TMEM256-PLSCR3K7ERE1 68 aa11.77□□□□□ -0.52
SCAMP4-201ENST00000316097 PRB2P02812 416 aaPredicted RBP11.77□□□□□ -0.52
SCAMP4-201ENST00000316097 RETNQ9HD89 108 aa11.77□□□□□ -0.53
SCAMP4-201ENST00000316097 CELA1Q9UNI1 258 aa11.77□□□□□ -0.53
SCAMP4-201ENST00000316097 ATP5EP2Q5VTU8 51 aa11.76□□□□□ -0.53
SCAMP4-201ENST00000316097 A0A096LPF7 62 aa11.75□□□□□ -0.53
SCAMP4-201ENST00000316097 Q8IZM0 81 aa11.75□□□□□ -0.53
SCAMP4-201ENST00000316097 UBL5Q9BZL1 73 aa11.74□□□□□ -0.53
SCAMP4-201ENST00000316097 Q8NAQ8 132 aa11.73□□□□□ -0.53
SCAMP4-201ENST00000316097 LINC00612Q8N6U2 182 aa11.73□□□□□ -0.53
SCAMP4-201ENST00000316097 NBEAL1Q6ZS30 2694 aa11.73□□□□□ -0.53
SCAMP4-201ENST00000316097 C4orf26Q17RF5 130 aa11.72□□□□□ -0.53
SCAMP4-201ENST00000316097 C20orf197Q8N268 126 aa11.72□□□□□ -0.53
SCAMP4-201ENST00000316097 LYPD5Q6UWN5 251 aa11.72□□□□□ -0.53
SCAMP4-201ENST00000316097 C6orf99Q4VX62 202 aa11.71□□□□□ -0.53
SCAMP4-201ENST00000316097 GYPEP15421 78 aa11.71□□□□□ -0.54
SCAMP4-201ENST00000316097 EGFEM1PQ0D2K5 195 aa11.71□□□□□ -0.54
SCAMP4-201ENST00000316097 HTN3P15516 51 aa11.7□□□□□ -0.54
SCAMP4-201ENST00000316097 TENM3Q9P273 2699 aa11.7□□□□□ -0.54
SCAMP4-201ENST00000316097 NDUFC2O95298 119 aa11.69□□□□□ -0.54
SCAMP4-201ENST00000316097 C9orf116Q5BN46 136 aaPredicted RBP11.69□□□□□ -0.54
SCAMP4-201ENST00000316097 DAD1P61803 113 aa11.69□□□□□ -0.54
SCAMP4-201ENST00000316097 Q5XG85 94 aa11.68□□□□□ -0.54
SCAMP4-201ENST00000316097 MGAM2Q2M2H8 2515 aa11.67□□□□□ -0.54
SCAMP4-201ENST00000316097 TRBV10-3A0A0K0K1G6 114 aa11.67□□□□□ -0.54
SCAMP4-201ENST00000316097 LYRM9A8MSI8 78 aa11.67□□□□□ -0.54
SCAMP4-201ENST00000316097 MIFP14174 115 aa11.67□□□□□ -0.54
SCAMP4-201ENST00000316097 HRCT1Q6UXD1 115 aa11.67□□□□□ -0.54
SCAMP4-201ENST00000316097 MDFIQ99750 246 aa11.67□□□□□ -0.54
SCAMP4-201ENST00000316097 Q8NDZ9 215 aa11.67□□□□□ -0.54
SCAMP4-201ENST00000316097 NDUFC2-KCTD14E9PQ53 114 aa11.66□□□□□ -0.54
SCAMP4-201ENST00000316097 A0A1B0GUV1 79 aa11.66□□□□□ -0.54
SCAMP4-201ENST00000316097 KIAA0087Q14695 138 aa11.66□□□□□ -0.54
SCAMP4-201ENST00000316097 RBM3P98179 157 aaKnown RBP11.65□□□□□ -0.54
SCAMP4-201ENST00000316097 Q6ZQT0 140 aa11.65□□□□□ -0.54
SCAMP4-201ENST00000316097 PRO0255Q9UI72 69 aa11.65□□□□□ -0.54
SCAMP4-201ENST00000316097 IGLV10-54A0A075B6I4 117 aa11.65□□□□□ -0.54
SCAMP4-201ENST00000316097 M0R2N4 97 aa11.64□□□□□ -0.55
SCAMP4-201ENST00000316097 LINC00575Q6W349 94 aa11.64□□□□□ -0.55
SCAMP4-201ENST00000316097 LAMTOR3Q9UHA4 124 aa11.64□□□□□ -0.55
SCAMP4-201ENST00000316097 SPART-AS1P0CW21 52 aa11.64□□□□□ -0.55
SCAMP4-201ENST00000316097 COX17Q14061 63 aa11.64□□□□□ -0.55
SCAMP4-201ENST00000316097 LINC00269Q8N2A0 174 aa11.64□□□□□ -0.55
SCAMP4-201ENST00000316097 FAM236DA0A1B0GTK5 79 aa11.63□□□□□ -0.55
SCAMP4-201ENST00000316097 FAM236CP0DP71 79 aa11.63□□□□□ -0.55
SCAMP4-201ENST00000316097 HAMPP81172 84 aa11.63□□□□□ -0.55
SCAMP4-201ENST00000316097 ZNF561-AS1K7EIQ3 104 aa11.62□□□□□ -0.55
SCAMP4-201ENST00000316097 CD164L2Q6UWJ8 174 aa11.62□□□□□ -0.55
SCAMP4-201ENST00000316097 DNAH3Q8TD57 4116 aa11.61□□□□□ -0.55
SCAMP4-201ENST00000316097 CHCHD10Q8WYQ3 142 aaPredicted RBP11.61□□□□□ -0.55
SCAMP4-201ENST00000316097 LINC01547P58512 204 aaPredicted RBP11.61□□□□□ -0.55
SCAMP4-201ENST00000316097 Q8N3U1 123 aa11.61□□□□□ -0.55
SCAMP4-201ENST00000316097 MRAPQ8TCY5 172 aa11.6□□□□□ -0.55
SCAMP4-201ENST00000316097 TRAV7A0A075B6U4 112 aa11.6□□□□□ -0.55
SCAMP4-201ENST00000316097 LOC110117498A0A087WWA1 95 aa11.59□□□□□ -0.55
SCAMP4-201ENST00000316097 Q6ZVQ6 151 aa11.59□□□□□ -0.55
SCAMP4-201ENST00000316097 H7BZZ5 65 aa11.58□□□□□ -0.56
SCAMP4-201ENST00000316097 C6orf223Q8N319 242 aa11.58□□□□□ -0.56
SCAMP4-201ENST00000316097 TRAV10A0A0B4J240 114 aa11.58□□□□□ -0.56
SCAMP4-201ENST00000316097 ANGP03950 147 aaKnown RBP11.58□□□□□ -0.56
SCAMP4-201ENST00000316097 A0A0J9YWU9 116 aa11.56□□□□□ -0.56
SCAMP4-201ENST00000316097 Q6ZQY7 126 aa11.56□□□□□ -0.56
SCAMP4-201ENST00000316097 REG3AQ06141 175 aa11.56□□□□□ -0.56
SCAMP4-201ENST00000316097 C10orf25Q5T742 122 aa11.56□□□□□ -0.56
SCAMP4-201ENST00000316097 SNURFQ9Y675 71 aa11.56□□□□□ -0.56
SCAMP4-201ENST00000316097 UNQ6190/PRO20217Q6UXQ8 127 aa11.55□□□□□ -0.56
SCAMP4-201ENST00000316097 Q6ZTC4 211 aa11.55□□□□□ -0.56
SCAMP4-201ENST00000316097 K7EIL1 84 aa11.53□□□□□ -0.56
SCAMP4-201ENST00000316097 BCE1O60756 84 aa11.53□□□□□ -0.56
SCAMP4-201ENST00000316097 RMI2Q96E14 147 aa11.53□□□□□ -0.56
SCAMP4-201ENST00000316097 SERP1Q9Y6X1 66 aa11.53□□□□□ -0.56
SCAMP4-201ENST00000316097 KLKP1Q107X0 134 aa11.52□□□□□ -0.57
SCAMP4-201ENST00000316097 SPAG11BQ08648 103 aa11.52□□□□□ -0.57
SCAMP4-201ENST00000316097 SCXQ7RTU7 201 aa11.51□□□□□ -0.57
SCAMP4-201ENST00000316097 IGLV6-57P01721 117 aa11.51□□□□□ -0.57
SCAMP4-201ENST00000316097 EPM2AB3EWF7 344 aa11.5□□□□□ -0.57
SCAMP4-201ENST00000316097 MUC7Q8TAX7 377 aa11.5□□□□□ -0.57
SCAMP4-201ENST00000316097 CXCL6P80162 114 aa11.49□□□□□ -0.57
SCAMP4-201ENST00000316097 F8WEM9 126 aa11.49□□□□□ -0.57
SCAMP4-201ENST00000316097 PDE6GP18545 87 aa11.48□□□□□ -0.57
SCAMP4-201ENST00000316097 TM2D3Q9BRN9 247 aa11.46□□□□□ -0.57
SCAMP4-201ENST00000316097 C11orf45Q8TAV5 145 aa11.46□□□□□ -0.58
SCAMP4-201ENST00000316097 KPRPQ5T749 579 aaPredicted RBP11.45□□□□□ -0.58
SCAMP4-201ENST00000316097 DIRC1Q969H9 104 aa11.45□□□□□ -0.58
SCAMP4-201ENST00000316097 XAGE1AQ9HD64 81 aa11.45□□□□□ -0.58
SCAMP4-201ENST00000316097 HUWE1Q7Z6Z7 4374 aaKnown RBP11.44□□□□□ -0.58
SCAMP4-201ENST00000316097 COL7A1Q02388 2944 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms