RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 CHTF8P0CG12 524 aa5.05□□□□□ -1.6
CDC42-201ENST00000315554 HERVK_113P63121 156 aa5.05□□□□□ -1.6
CDC42-201ENST00000315554 C10orf25Q5T742 122 aa5.05□□□□□ -1.6
CDC42-201ENST00000315554 C2orf82Q6UX34 121 aa5.05□□□□□ -1.6
CDC42-201ENST00000315554 SDIM1Q6ZPB5 146 aa5.05□□□□□ -1.6
CDC42-201ENST00000315554 OR10D4PQ8NGN7 298 aa5.05□□□□□ -1.6
CDC42-201ENST00000315554 CARD19Q96LW7 228 aa5.05□□□□□ -1.6
CDC42-201ENST00000315554 CHAC1Q9BUX1 264 aa5.05□□□□□ -1.6
CDC42-201ENST00000315554 HERC2O95714 4834 aa5.05□□□□□ -1.6
CDC42-201ENST00000315554 IGKV2-24A0A0C4DH68 120 aa5.04□□□□□ -1.6
CDC42-201ENST00000315554 LEPROTL1O95214 131 aa5.04□□□□□ -1.6
CDC42-201ENST00000315554 SMR3BP02814 79 aaPredicted RBP5.04□□□□□ -1.6
CDC42-201ENST00000315554 IGLC3P0DOY3 106 aa5.04□□□□□ -1.6
CDC42-201ENST00000315554 SEC11AP67812 179 aa5.04□□□□□ -1.6
CDC42-201ENST00000315554 KIAA0087Q14695 138 aa5.04□□□□□ -1.6
CDC42-201ENST00000315554 UNQ6190/PRO20217Q6UXQ8 127 aa5.04□□□□□ -1.6
CDC42-201ENST00000315554 PAM16Q9Y3D7 125 aa5.04□□□□□ -1.6
CDC42-201ENST00000315554 C11orf86A6NJI1 115 aa5.03□□□□□ -1.6
CDC42-201ENST00000315554 SMIM1B2RUZ4 78 aa5.03□□□□□ -1.6
CDC42-201ENST00000315554 ZNF22P17026 224 aaPredicted RBP5.03□□□□□ -1.6
CDC42-201ENST00000315554 PYY3Q5JQD4 70 aa5.03□□□□□ -1.6
CDC42-201ENST00000315554 Q6ZSA8 131 aa5.03□□□□□ -1.6
CDC42-201ENST00000315554 SCXQ7RTU7 201 aa5.03□□□□□ -1.6
CDC42-201ENST00000315554 C2orf48Q96LS8 159 aa5.03□□□□□ -1.6
CDC42-201ENST00000315554 APOBP04114 4563 aaKnown RBP5.03□□□□□ -1.6
CDC42-201ENST00000315554 IGLV5-45A0A087WSX0 123 aa5.02□□□□□ -1.61
CDC42-201ENST00000315554 A0A096LNI7 61 aa5.02□□□□□ -1.61
CDC42-201ENST00000315554 NDUFA1O15239 70 aa5.02□□□□□ -1.61
CDC42-201ENST00000315554 PRSS2P07478 247 aa5.02□□□□□ -1.61
CDC42-201ENST00000315554 Q75L30 129 aa5.02□□□□□ -1.61
CDC42-201ENST00000315554 CIRBP-AS1Q8TBR5 109 aa5.02□□□□□ -1.61
CDC42-201ENST00000315554 DPH3Q96FX2 82 aa5.02□□□□□ -1.61
CDC42-201ENST00000315554 PMCHL2Q9BQD1 86 aa5.02□□□□□ -1.61
CDC42-201ENST00000315554 MRPL35Q9NZE8 188 aaKnown RBP5.02□□□□□ -1.61
CDC42-201ENST00000315554 C6orf48Q9UBA6 75 aa5.02□□□□□ -1.61
CDC42-201ENST00000315554 PLA2G2DQ9UNK4 145 aa5.02□□□□□ -1.61
CDC42-201ENST00000315554 TRAV12-1A0A0B4J245 112 aa5.01□□□□□ -1.61
CDC42-201ENST00000315554 RPL18AQ02543 176 aaKnown RBP5.01□□□□□ -1.61
CDC42-201ENST00000315554 C9orf116Q5BN46 136 aaPredicted RBP5.01□□□□□ -1.61
CDC42-201ENST00000315554 TMEM170BQ5T4T1 132 aa5.01□□□□□ -1.61
CDC42-201ENST00000315554 H3BRM9 83 aa5□□□□□ -1.61
CDC42-201ENST00000315554 COL5A1-AS1Q5SY13 56 aa5□□□□□ -1.61
CDC42-201ENST00000315554 COX7B2Q8TF08 81 aa5□□□□□ -1.61
CDC42-201ENST00000315554 LOC107984640A0A0U1RRK4 108 aa5□□□□□ -1.61
CDC42-201ENST00000315554 F8VRH5 84 aa5□□□□□ -1.61
CDC42-201ENST00000315554 Q8IZM0 81 aa5□□□□□ -1.61
CDC42-201ENST00000315554 SPACA4Q8TDM5 124 aa5□□□□□ -1.61
CDC42-201ENST00000315554 DNAH8Q96JB1 4490 aa4.99□□□□□ -1.61
CDC42-201ENST00000315554 A0A087WYN8 130 aa4.99□□□□□ -1.61
CDC42-201ENST00000315554 J3KT08 172 aa4.99□□□□□ -1.61
CDC42-201ENST00000315554 SEC61BP60468 96 aaKnown RBP4.99□□□□□ -1.61
CDC42-201ENST00000315554 COA6Q5JTJ3 125 aaKnown RBP4.99□□□□□ -1.61
CDC42-201ENST00000315554 IGLV5-39A0A0G2JS06 123 aa4.98□□□□□ -1.61
CDC42-201ENST00000315554 TMEM223A0PJW6 202 aa4.98□□□□□ -1.61
CDC42-201ENST00000315554 CIRBPQ14011 172 aaKnown RBP4.98□□□□□ -1.61
CDC42-201ENST00000315554 Q6ZRP5 223 aa4.98□□□□□ -1.61
CDC42-201ENST00000315554 Q8N1X5 172 aa4.98□□□□□ -1.61
CDC42-201ENST00000315554 STPG4Q8N801 248 aa4.98□□□□□ -1.61
CDC42-201ENST00000315554 HSPG2P98160 4391 aa4.98□□□□□ -1.61
CDC42-201ENST00000315554 TRBV30A0A0K0K1B3 111 aa4.97□□□□□ -1.61
CDC42-201ENST00000315554 SYS1-DBNDD2H3BUS1 97 aa4.97□□□□□ -1.61
CDC42-201ENST00000315554 KRTDAPP60985 99 aa4.97□□□□□ -1.61
CDC42-201ENST00000315554 Q5VSD8 79 aa4.97□□□□□ -1.61
CDC42-201ENST00000315554 ZNF625Q96I27 306 aaPredicted RBP4.97□□□□□ -1.61
CDC42-201ENST00000315554 A0A1W2PNN7 141 aa4.96□□□□□ -1.62
CDC42-201ENST00000315554 FAM168BA1KXE4 195 aa4.96□□□□□ -1.62
CDC42-201ENST00000315554 DPM2O94777 84 aa4.96□□□□□ -1.62
CDC42-201ENST00000315554 C3orf79P0CE67 100 aa4.96□□□□□ -1.62
CDC42-201ENST00000315554 CXCL5P42830 114 aa4.96□□□□□ -1.62
CDC42-201ENST00000315554 EPM2AB3EWF7 344 aa4.95□□□□□ -1.62
CDC42-201ENST00000315554 IGKCP01834 107 aa4.95□□□□□ -1.62
CDC42-201ENST00000315554 PLNP26678 52 aa4.95□□□□□ -1.62
CDC42-201ENST00000315554 HIST3H2BBQ8N257 126 aa4.95□□□□□ -1.62
CDC42-201ENST00000315554 XAGE1AQ9HD64 81 aa4.95□□□□□ -1.62
CDC42-201ENST00000315554 PLAC8Q9NZF1 115 aa4.95□□□□□ -1.62
CDC42-201ENST00000315554 PKIGQ9Y2B9 76 aa4.95□□□□□ -1.62
CDC42-201ENST00000315554 ABCA13Q86UQ4 5058 aa4.94□□□□□ -1.62
CDC42-201ENST00000315554 NDUFC2-KCTD14E9PQ53 114 aa4.94□□□□□ -1.62
CDC42-201ENST00000315554 TLX1NBP0CAT3 122 aa4.94□□□□□ -1.62
CDC42-201ENST00000315554 S100A2P29034 98 aa4.94□□□□□ -1.62
CDC42-201ENST00000315554 PFN2P35080 140 aa4.94□□□□□ -1.62
CDC42-201ENST00000315554 TSPEAR-AS2P59090 65 aa4.94□□□□□ -1.62
CDC42-201ENST00000315554 C9orf129Q5T035 196 aaKnown RBP4.94□□□□□ -1.62
CDC42-201ENST00000315554 LINC00474Q9P2X8 69 aa4.94□□□□□ -1.62
CDC42-201ENST00000315554 FAT1Q14517 4588 aa4.94□□□□□ -1.62
CDC42-201ENST00000315554 C9orf118A6NHY6 69 aa4.94□□□□□ -1.62
CDC42-201ENST00000315554 LINC01545Q5VT33 79 aa4.94□□□□□ -1.62
CDC42-201ENST00000315554 FAM236DA0A1B0GTK5 79 aa4.93□□□□□ -1.62
CDC42-201ENST00000315554 FAM240AA0A1B0GVK7 77 aa4.93□□□□□ -1.62
CDC42-201ENST00000315554 LEPROTO15243 131 aa4.93□□□□□ -1.62
CDC42-201ENST00000315554 FAM236CP0DP71 79 aa4.93□□□□□ -1.62
CDC42-201ENST00000315554 RPL37AP61513 92 aaKnown RBP4.93□□□□□ -1.62
CDC42-201ENST00000315554 PHF5AQ7RTV0 110 aaKnown RBP4.93□□□□□ -1.62
CDC42-201ENST00000315554 KRTAP7-1Q8IUC3 87 aa4.93□□□□□ -1.62
CDC42-201ENST00000315554 ATOH7Q8N100 152 aa4.93□□□□□ -1.62
CDC42-201ENST00000315554 PLEKHB2Q96CS7 222 aa4.93□□□□□ -1.62
CDC42-201ENST00000315554 HIST1H2BLQ99880 126 aa4.93□□□□□ -1.62
CDC42-201ENST00000315554 PRO1933Q9H354 126 aa4.93□□□□□ -1.62
CDC42-201ENST00000315554 HERVK_113P61574 105 aa4.92□□□□□ -1.62
CDC42-201ENST00000315554 PMAIP1Q13794 54 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms