RNA–Protein interactions for RNA: ENST00000314121.8

ZNF541-202, Transcript of zinc finger protein 541, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ZNF541, Length 4,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-202ENST00000314121 LRCOL1A6NCL2 159 aa9.65□□□□□ -0.86
ZNF541-202ENST00000314121 TMEM254Q8TBM7 123 aa9.65□□□□□ -0.86
ZNF541-202ENST00000314121 RETNQ9HD89 108 aa9.65□□□□□ -0.86
ZNF541-202ENST00000314121 Q6ZRU5 148 aa9.64□□□□□ -0.87
ZNF541-202ENST00000314121 C4orf26Q17RF5 130 aa9.63□□□□□ -0.87
ZNF541-202ENST00000314121 PRO0628Q9UI54 55 aa9.62□□□□□ -0.87
ZNF541-202ENST00000314121 RPS28P62857 69 aaKnown RBP9.62□□□□□ -0.87
ZNF541-202ENST00000314121 BCE1O60756 84 aa9.61□□□□□ -0.87
ZNF541-202ENST00000314121 REG3GQ6UW15 175 aa9.61□□□□□ -0.87
ZNF541-202ENST00000314121 LINC00208Q96KT6 92 aa9.61□□□□□ -0.87
ZNF541-202ENST00000314121 SPATA3Q8NHX4 192 aa9.6□□□□□ -0.87
ZNF541-202ENST00000314121 PLAC8L1A1L4L8 177 aa9.6□□□□□ -0.87
ZNF541-202ENST00000314121 ZNF706Q9Y5V0 76 aaPredicted RBP9.59□□□□□ -0.87
ZNF541-202ENST00000314121 LINC00474Q9P2X8 69 aa9.59□□□□□ -0.87
ZNF541-202ENST00000314121 SZT2Q5T011 3432 aa9.58□□□□□ -0.88
ZNF541-202ENST00000314121 A6NED7 52 aa9.58□□□□□ -0.88
ZNF541-202ENST00000314121 Q8N9L7 120 aa9.58□□□□□ -0.88
ZNF541-202ENST00000314121 NHLRC4P0CG21 123 aaPredicted RBP9.58□□□□□ -0.88
ZNF541-202ENST00000314121 C10orf25Q5T742 122 aa9.58□□□□□ -0.88
ZNF541-202ENST00000314121 FSHBP01225 129 aa9.58□□□□□ -0.88
ZNF541-202ENST00000314121 PMAIP1Q13794 54 aa9.58□□□□□ -0.88
ZNF541-202ENST00000314121 EIF4EBP3O60516 100 aaPredicted RBP9.57□□□□□ -0.88
ZNF541-202ENST00000314121 SPINK6Q6UWN8 80 aa9.57□□□□□ -0.88
ZNF541-202ENST00000314121 X6R8D5 127 aa9.57□□□□□ -0.88
ZNF541-202ENST00000314121 MAP1AP78559 2803 aaPredicted RBP9.56□□□□□ -0.88
ZNF541-202ENST00000314121 C6orf48Q9UBA6 75 aa9.56□□□□□ -0.88
ZNF541-202ENST00000314121 A0A087WSZ3 146 aa9.56□□□□□ -0.88
ZNF541-202ENST00000314121 SEC61GP60059 68 aa9.55□□□□□ -0.88
ZNF541-202ENST00000314121 TRBV7-6A0A0J9YX20 115 aa9.55□□□□□ -0.88
ZNF541-202ENST00000314121 LAMA1P25391 3075 aa9.55□□□□□ -0.88
ZNF541-202ENST00000314121 IGLV9-49A0A0B4J1Y8 123 aa9.55□□□□□ -0.88
ZNF541-202ENST00000314121 Q6ZQT0 140 aa9.55□□□□□ -0.88
ZNF541-202ENST00000314121 CELSR3Q9NYQ7 3312 aa9.55□□□□□ -0.88
ZNF541-202ENST00000314121 CASC2Q6XLA1 102 aa9.54□□□□□ -0.88
ZNF541-202ENST00000314121 VCANP13611 3396 aa9.54□□□□□ -0.88
ZNF541-202ENST00000314121 F8P00451 2351 aa9.53□□□□□ -0.88
ZNF541-202ENST00000314121 LOC110117498A0A087WWA1 95 aa9.53□□□□□ -0.88
ZNF541-202ENST00000314121 HECTD1Q9ULT8 2610 aa9.53□□□□□ -0.88
ZNF541-202ENST00000314121 PSPHP1O15172 72 aa9.52□□□□□ -0.88
ZNF541-202ENST00000314121 KIAA0087Q14695 138 aa9.52□□□□□ -0.89
ZNF541-202ENST00000314121 SMCR5Q8TEV8 140 aa9.52□□□□□ -0.89
ZNF541-202ENST00000314121 Q9BRP9 147 aa9.52□□□□□ -0.89
ZNF541-202ENST00000314121 C7orf33Q8WU49 177 aa9.52□□□□□ -0.89
ZNF541-202ENST00000314121 LINC01556Q5JQF7 62 aa9.51□□□□□ -0.89
ZNF541-202ENST00000314121 ELOF1P60002 83 aaKnown RBP9.51□□□□□ -0.89
ZNF541-202ENST00000314121 ESRGQ1W209 222 aa9.5□□□□□ -0.89
ZNF541-202ENST00000314121 C22orf24Q9Y442 160 aa9.5□□□□□ -0.89
ZNF541-202ENST00000314121 HCG22E2RYF7 251 aa9.5□□□□□ -0.89
ZNF541-202ENST00000314121 M0R2N4 97 aa9.5□□□□□ -0.89
ZNF541-202ENST00000314121 ZNF575Q86XF7 245 aa9.5□□□□□ -0.89
ZNF541-202ENST00000314121 DNAH14Q0VDD8 3507 aa9.5□□□□□ -0.89
ZNF541-202ENST00000314121 USP24Q9UPU5 2620 aa9.5□□□□□ -0.89
ZNF541-202ENST00000314121 A0A1B0GW54 56 aa9.49□□□□□ -0.89
ZNF541-202ENST00000314121 PRR15LQ9BU68 103 aa9.48□□□□□ -0.89
ZNF541-202ENST00000314121 H3BNG1 76 aa9.47□□□□□ -0.89
ZNF541-202ENST00000314121 DEFB116Q30KQ4 102 aa9.47□□□□□ -0.89
ZNF541-202ENST00000314121 PRLHP81277 87 aa9.46□□□□□ -0.9
ZNF541-202ENST00000314121 H0Y9P7 68 aa9.45□□□□□ -0.9
ZNF541-202ENST00000314121 ZNF292O60281 2723 aa9.45□□□□□ -0.9
ZNF541-202ENST00000314121 SMIM29Q86T20 159 aa9.45□□□□□ -0.9
ZNF541-202ENST00000314121 LINC00167Q96N53 147 aa9.45□□□□□ -0.9
ZNF541-202ENST00000314121 GVQW2A0A096LPI5 108 aaPredicted RBP9.45□□□□□ -0.9
ZNF541-202ENST00000314121 hDV103S1A0JD37 113 aa9.45□□□□□ -0.9
ZNF541-202ENST00000314121 CSNK1G2-AS1Q8NCQ2 148 aa9.43□□□□□ -0.9
ZNF541-202ENST00000314121 IGLV6-57P01721 117 aa9.43□□□□□ -0.9
ZNF541-202ENST00000314121 Q8NAQ8 132 aa9.43□□□□□ -0.9
ZNF541-202ENST00000314121 Q8NBF4 154 aa9.42□□□□□ -0.9
ZNF541-202ENST00000314121 DSPP15924 2871 aaKnown RBP9.42□□□□□ -0.9
ZNF541-202ENST00000314121 TM2D3Q9BRN9 247 aa9.41□□□□□ -0.9
ZNF541-202ENST00000314121 IGHV6-1A0A0B4J1U7 121 aa9.4□□□□□ -0.9
ZNF541-202ENST00000314121 PCOTHQ58A44 107 aa9.4□□□□□ -0.91
ZNF541-202ENST00000314121 Q6ZRX8 168 aa9.4□□□□□ -0.91
ZNF541-202ENST00000314121 NUPR2A6NF83 97 aa9.39□□□□□ -0.91
ZNF541-202ENST00000314121 VPREB1P12018 145 aa9.39□□□□□ -0.91
ZNF541-202ENST00000314121 A0A096LNT2 108 aa9.38□□□□□ -0.91
ZNF541-202ENST00000314121 GIG44P09565 113 aaPredicted RBP9.38□□□□□ -0.91
ZNF541-202ENST00000314121 FREM2Q5SZK8 3169 aa9.37□□□□□ -0.91
ZNF541-202ENST00000314121 C1orf64Q8NEQ6 169 aa9.36□□□□□ -0.91
ZNF541-202ENST00000314121 LINC01600Q96MT4 127 aa9.35□□□□□ -0.91
ZNF541-202ENST00000314121 C19orf73Q9NVV2 129 aa9.35□□□□□ -0.91
ZNF541-202ENST00000314121 SPEGQ15772 3267 aa9.35□□□□□ -0.91
ZNF541-202ENST00000314121 FLNAP21333 2647 aaKnown RBP9.35□□□□□ -0.91
ZNF541-202ENST00000314121 CIRBP-AS1Q8TBR5 109 aa9.34□□□□□ -0.91
ZNF541-202ENST00000314121 FRYQ5TBA9 3013 aa9.34□□□□□ -0.91
ZNF541-202ENST00000314121 Q6ZRP5 223 aa9.34□□□□□ -0.91
ZNF541-202ENST00000314121 MGAM2Q2M2H8 2515 aa9.33□□□□□ -0.92
ZNF541-202ENST00000314121 LINC00476Q8WZB0 136 aa9.33□□□□□ -0.92
ZNF541-202ENST00000314121 CFAP46Q8IYW2 2715 aa9.33□□□□□ -0.92
ZNF541-202ENST00000314121 NBEAQ8NFP9 2946 aa9.33□□□□□ -0.92
ZNF541-202ENST00000314121 PRR34Q9NV39 138 aa9.32□□□□□ -0.92
ZNF541-202ENST00000314121 ATRQ13535 2644 aa9.32□□□□□ -0.92
ZNF541-202ENST00000314121 K7ERS5 55 aa9.32□□□□□ -0.92
ZNF541-202ENST00000314121 LY6G6CO95867 125 aa9.32□□□□□ -0.92
ZNF541-202ENST00000314121 LINC00528Q8N1L1 170 aa9.32□□□□□ -0.92
ZNF541-202ENST00000314121 LIMD2Q9BT23 127 aa9.32□□□□□ -0.92
ZNF541-202ENST00000314121 LINC00612Q8N6U2 182 aa9.31□□□□□ -0.92
ZNF541-202ENST00000314121 ERC2-IT1O76042 136 aa9.3□□□□□ -0.92
ZNF541-202ENST00000314121 LINC00336Q6ZUF6 198 aa9.3□□□□□ -0.92
ZNF541-202ENST00000314121 ST20-AS1Q8NBB2 130 aa9.3□□□□□ -0.92
ZNF541-202ENST00000314121 KLKP1Q107X0 134 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms