RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 PRO0461Q9UI25 63 aa5.78□□□□□ -1.48
VPS41-202ENST00000310301 C1orf134Q5TEV5 83 aa5.78□□□□□ -1.48
VPS41-202ENST00000310301 CIRBP-AS1Q8TBR5 109 aa5.78□□□□□ -1.48
VPS41-202ENST00000310301 CENPFP49454 3210 aa5.78□□□□□ -1.48
VPS41-202ENST00000310301 COX8CQ7Z4L0 72 aa5.78□□□□□ -1.48
VPS41-202ENST00000310301 KRTAP1-3Q8IUG1 177 aa5.78□□□□□ -1.48
VPS41-202ENST00000310301 SBSPONQ8IVN8 264 aa5.77□□□□□ -1.49
VPS41-202ENST00000310301 TET2Q6N021 2002 aaPredicted RBP5.77□□□□□ -1.49
VPS41-202ENST00000310301 LINC00474Q9P2X8 69 aa5.77□□□□□ -1.49
VPS41-202ENST00000310301 Q6ZSN1 163 aa5.76□□□□□ -1.49
VPS41-202ENST00000310301 A0A1B0GU69 56 aa5.76□□□□□ -1.49
VPS41-202ENST00000310301 MDFIQ99750 246 aa5.76□□□□□ -1.49
VPS41-202ENST00000310301 BCE1O60756 84 aa5.75□□□□□ -1.49
VPS41-202ENST00000310301 PCSK5Q92824 1860 aa5.75□□□□□ -1.49
VPS41-202ENST00000310301 LINC01546A6NGU7 62 aa5.74□□□□□ -1.49
VPS41-202ENST00000310301 FHL2Q14192 279 aa5.74□□□□□ -1.49
VPS41-202ENST00000310301 ZNF292O60281 2723 aa5.73□□□□□ -1.49
VPS41-202ENST00000310301 KRTAP1-1Q07627 177 aa5.73□□□□□ -1.49
VPS41-202ENST00000310301 SETD2Q9BYW2 2564 aaPredicted RBP5.72□□□□□ -1.49
VPS41-202ENST00000310301 FAM218AQ96MZ4 157 aa5.72□□□□□ -1.49
VPS41-202ENST00000310301 KRTAP21-3Q3LHN1 58 aa5.72□□□□□ -1.49
VPS41-202ENST00000310301 FAM19A4Q96LR4 140 aa5.72□□□□□ -1.49
VPS41-202ENST00000310301 C8orf87E5RJ46 101 aa5.72□□□□□ -1.49
VPS41-202ENST00000310301 Q6ZTC4 211 aa5.72□□□□□ -1.49
VPS41-202ENST00000310301 KIAA0087Q14695 138 aa5.71□□□□□ -1.49
VPS41-202ENST00000310301 C7orf65Q6ZTY9 151 aa5.7□□□□□ -1.5
VPS41-202ENST00000310301 TM2D3Q9BRN9 247 aa5.7□□□□□ -1.5
VPS41-202ENST00000310301 IGLV5-39A0A0G2JS06 123 aa5.7□□□□□ -1.5
VPS41-202ENST00000310301 ACYP2P14621 99 aa5.7□□□□□ -1.5
VPS41-202ENST00000310301 PRLHP81277 87 aa5.7□□□□□ -1.5
VPS41-202ENST00000310301 LINC01561Q8N1V8 128 aa5.7□□□□□ -1.5
VPS41-202ENST00000310301 A0A1B0GUV1 79 aa5.7□□□□□ -1.5
VPS41-202ENST00000310301 ATP11AUNQ6ZP68 121 aa5.69□□□□□ -1.5
VPS41-202ENST00000310301 LINC01556Q5JQF7 62 aa5.69□□□□□ -1.5
VPS41-202ENST00000310301 Q6ZRU5 148 aa5.69□□□□□ -1.5
VPS41-202ENST00000310301 C2orf48Q96LS8 159 aa5.69□□□□□ -1.5
VPS41-202ENST00000310301 IGKV2D-30A0A075B6S6 120 aa5.68□□□□□ -1.5
VPS41-202ENST00000310301 IGKV2-30P06310 120 aa5.68□□□□□ -1.5
VPS41-202ENST00000310301 SPINT4Q6UDR6 99 aa5.68□□□□□ -1.5
VPS41-202ENST00000310301 KIF25-AS1Q9Y6Z4 181 aa5.68□□□□□ -1.5
VPS41-202ENST00000310301 F8WDY8 70 aa5.68□□□□□ -1.5
VPS41-202ENST00000310301 Q6ZQT0 140 aa5.68□□□□□ -1.5
VPS41-202ENST00000310301 K7EIL1 84 aa5.68□□□□□ -1.5
VPS41-202ENST00000310301 IGLV5-52A0A0A0MRZ9 124 aa5.67□□□□□ -1.5
VPS41-202ENST00000310301 C6orf48Q9UBA6 75 aa5.67□□□□□ -1.5
VPS41-202ENST00000310301 SMCR5Q8TEV8 140 aa5.67□□□□□ -1.5
VPS41-202ENST00000310301 TP53AIP1Q9HCN2 124 aa5.67□□□□□ -1.5
VPS41-202ENST00000310301 CFAP46Q8IYW2 2715 aa5.66□□□□□ -1.5
VPS41-202ENST00000310301 AGRNO00468 2067 aa5.66□□□□□ -1.5
VPS41-202ENST00000310301 LOC110117498A0A087WWA1 95 aa5.65□□□□□ -1.5
VPS41-202ENST00000310301 C22orf24Q9Y442 160 aa5.65□□□□□ -1.5
VPS41-202ENST00000310301 A8MUN3 132 aa5.65□□□□□ -1.51
VPS41-202ENST00000310301 UTRNP46939 3433 aa5.65□□□□□ -1.51
VPS41-202ENST00000310301 IGLV8-61A0A075B6I0 122 aa5.64□□□□□ -1.51
VPS41-202ENST00000310301 H3BPC8 53 aa5.64□□□□□ -1.51
VPS41-202ENST00000310301 CHD9Q3L8U1 2897 aa5.64□□□□□ -1.51
VPS41-202ENST00000310301 LYPD5Q6UWN5 251 aa5.64□□□□□ -1.51
VPS41-202ENST00000310301 C11orf72Q8NBR9 251 aa5.64□□□□□ -1.51
VPS41-202ENST00000310301 H3BNG1 76 aa5.63□□□□□ -1.51
VPS41-202ENST00000310301 IGHV3OR16-9A0A0B4J2B5 98 aa5.63□□□□□ -1.51
VPS41-202ENST00000310301 LINC00315P59091 139 aa5.63□□□□□ -1.51
VPS41-202ENST00000310301 FAM229AH3BQW9 127 aa5.62□□□□□ -1.51
VPS41-202ENST00000310301 CD164Q04900 197 aa5.62□□□□□ -1.51
VPS41-202ENST00000310301 LINC00336Q6ZUF6 198 aa5.62□□□□□ -1.51
VPS41-202ENST00000310301 ELOF1P60002 83 aaKnown RBP5.62□□□□□ -1.51
VPS41-202ENST00000310301 IGLV5-45A0A087WSX0 123 aa5.61□□□□□ -1.51
VPS41-202ENST00000310301 TRAV22A0A0B4J277 110 aa5.61□□□□□ -1.51
VPS41-202ENST00000310301 A0A1B0GW54 56 aa5.61□□□□□ -1.51
VPS41-202ENST00000310301 CYP4F30PQ9H0H9 118 aa5.6□□□□□ -1.51
VPS41-202ENST00000310301 RPL37AP61513 92 aaKnown RBP5.6□□□□□ -1.51
VPS41-202ENST00000310301 C19orf73Q9NVV2 129 aa5.6□□□□□ -1.51
VPS41-202ENST00000310301 CHD7Q9P2D1 2997 aa5.6□□□□□ -1.51
VPS41-202ENST00000310301 Q8NBF4 154 aa5.59□□□□□ -1.51
VPS41-202ENST00000310301 LINC00167Q96N53 147 aa5.59□□□□□ -1.51
VPS41-202ENST00000310301 ITPR3Q14573 2671 aa5.59□□□□□ -1.51
VPS41-202ENST00000310301 SSBP3-AS1Q7Z2R9 100 aa5.59□□□□□ -1.51
VPS41-202ENST00000310301 COA5Q86WW8 74 aa5.59□□□□□ -1.51
VPS41-202ENST00000310301 C16orf90A8MZG2 172 aa5.59□□□□□ -1.51
VPS41-202ENST00000310301 KRTAP10-11P60412 298 aa5.59□□□□□ -1.51
VPS41-202ENST00000310301 LINC00476Q8WZB0 136 aa5.59□□□□□ -1.51
VPS41-202ENST00000310301 ERC2-IT1O76042 136 aa5.58□□□□□ -1.52
VPS41-202ENST00000310301 FLNAP21333 2647 aaKnown RBP5.58□□□□□ -1.52
VPS41-202ENST00000310301 PLA2G1BP04054 148 aaKnown RBP5.58□□□□□ -1.52
VPS41-202ENST00000310301 KLK9Q2XQG4 91 aa5.58□□□□□ -1.52
VPS41-202ENST00000310301 COL27A1Q8IZC6 1860 aaPredicted RBP5.58□□□□□ -1.52
VPS41-202ENST00000310301 KRTAP10-3P60369 221 aa5.57□□□□□ -1.52
VPS41-202ENST00000310301 MOBPQ13875 183 aa5.57□□□□□ -1.52
VPS41-202ENST00000310301 TRANK1O15050 2925 aa5.57□□□□□ -1.52
VPS41-202ENST00000310301 NBDYA0A0U1RRE5 68 aa5.57□□□□□ -1.52
VPS41-202ENST00000310301 HTTP42858 3142 aa5.57□□□□□ -1.52
VPS41-202ENST00000310301 MGAM2Q2M2H8 2515 aa5.56□□□□□ -1.52
VPS41-202ENST00000310301 LITAFQ99732 161 aa5.56□□□□□ -1.52
VPS41-202ENST00000310301 TRBV7-4A0A0J9YYF1 115 aa5.56□□□□□ -1.52
VPS41-202ENST00000310301 KTN1-AS1Q86SY8 53 aa5.56□□□□□ -1.52
VPS41-202ENST00000310301 ATRQ13535 2644 aa5.56□□□□□ -1.52
VPS41-202ENST00000310301 ST20-AS1Q8NBB2 130 aa5.55□□□□□ -1.52
VPS41-202ENST00000310301 SETXQ7Z333 2677 aaKnown RBP5.55□□□□□ -1.52
VPS41-202ENST00000310301 CHD6Q8TD26 2715 aa5.55□□□□□ -1.52
VPS41-202ENST00000310301 Q6ZRX8 168 aa5.55□□□□□ -1.52
VPS41-202ENST00000310301 LINC01600Q96MT4 127 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms