RNA–Protein interactions for RNA: ENST00000309241.9

PPARGC1B-201, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPARGC1B, Length 10,568 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-201ENST00000309241 SMIM1B2RUZ4 78 aa5.99□□□□□ -1.45
PPARGC1B-201ENST00000309241 C11orf21Q9P2W6 132 aa5.99□□□□□ -1.45
PPARGC1B-201ENST00000309241 MDFIQ99750 246 aa5.99□□□□□ -1.45
PPARGC1B-201ENST00000309241 C8orf87E5RJ46 101 aa5.98□□□□□ -1.45
PPARGC1B-201ENST00000309241 NBEAL1Q6ZS30 2694 aa5.98□□□□□ -1.45
PPARGC1B-201ENST00000309241 C18orf65Q6ZTR6 163 aa5.98□□□□□ -1.45
PPARGC1B-201ENST00000309241 IGLV1-40P01703 118 aa5.98□□□□□ -1.45
PPARGC1B-201ENST00000309241 PRR9Q5T870 116 aa5.98□□□□□ -1.45
PPARGC1B-201ENST00000309241 C1orf229Q6ZS94 237 aaPredicted RBP5.98□□□□□ -1.45
PPARGC1B-201ENST00000309241 SMCR5Q8TEV8 140 aa5.98□□□□□ -1.45
PPARGC1B-201ENST00000309241 IGLV5-39A0A0G2JS06 123 aa5.98□□□□□ -1.45
PPARGC1B-201ENST00000309241 J3QL48 77 aa5.98□□□□□ -1.45
PPARGC1B-201ENST00000309241 PROK1P58294 105 aa5.98□□□□□ -1.45
PPARGC1B-201ENST00000309241 TEP1Q99973 2627 aaKnown RBP5.97□□□□□ -1.45
PPARGC1B-201ENST00000309241 LINC00959A0A1B0GUT2 108 aa5.97□□□□□ -1.45
PPARGC1B-201ENST00000309241 CYSRT1A8MQ03 144 aa5.97□□□□□ -1.45
PPARGC1B-201ENST00000309241 KLKP1Q107X0 134 aa5.96□□□□□ -1.45
PPARGC1B-201ENST00000309241 FAM229AH3BQW9 127 aa5.96□□□□□ -1.46
PPARGC1B-201ENST00000309241 MSMPQ1L6U9 139 aa5.96□□□□□ -1.46
PPARGC1B-201ENST00000309241 LINC00242Q5T6M2 205 aa5.96□□□□□ -1.46
PPARGC1B-201ENST00000309241 KTN1-AS1Q86SY8 53 aa5.96□□□□□ -1.46
PPARGC1B-201ENST00000309241 Q9BRP9 147 aa5.96□□□□□ -1.46
PPARGC1B-201ENST00000309241 PRM2P04554 102 aa5.96□□□□□ -1.46
PPARGC1B-201ENST00000309241 C6orf223Q8N319 242 aa5.96□□□□□ -1.46
PPARGC1B-201ENST00000309241 LINC00575Q6W349 94 aa5.96□□□□□ -1.46
PPARGC1B-201ENST00000309241 ACYP2P14621 99 aa5.95□□□□□ -1.46
PPARGC1B-201ENST00000309241 H3BS24 57 aa5.95□□□□□ -1.46
PPARGC1B-201ENST00000309241 C11orf71Q6IPW1 123 aa5.95□□□□□ -1.46
PPARGC1B-201ENST00000309241 C7orf65Q6ZTY9 151 aa5.95□□□□□ -1.46
PPARGC1B-201ENST00000309241 IGKV2D-30A0A075B6S6 120 aa5.95□□□□□ -1.46
PPARGC1B-201ENST00000309241 IGKV2-30P06310 120 aa5.95□□□□□ -1.46
PPARGC1B-201ENST00000309241 H3BNG1 76 aa5.94□□□□□ -1.46
PPARGC1B-201ENST00000309241 PRR15Q8IV56 129 aa5.94□□□□□ -1.46
PPARGC1B-201ENST00000309241 C11orf72Q8NBR9 251 aa5.94□□□□□ -1.46
PPARGC1B-201ENST00000309241 Q6ZTC4 211 aa5.94□□□□□ -1.46
PPARGC1B-201ENST00000309241 ATP11AUNQ6ZP68 121 aa5.93□□□□□ -1.46
PPARGC1B-201ENST00000309241 WISP2O76076 250 aa5.93□□□□□ -1.46
PPARGC1B-201ENST00000309241 COX6A2Q02221 97 aa5.93□□□□□ -1.46
PPARGC1B-201ENST00000309241 MOBPQ13875 183 aa5.93□□□□□ -1.46
PPARGC1B-201ENST00000309241 RPL37AP61513 92 aaKnown RBP5.93□□□□□ -1.46
PPARGC1B-201ENST00000309241 H0Y9P7 68 aa5.93□□□□□ -1.46
PPARGC1B-201ENST00000309241 Q9UF83 564 aa5.92□□□□□ -1.46
PPARGC1B-201ENST00000309241 C9orf116Q5BN46 136 aaPredicted RBP5.92□□□□□ -1.46
PPARGC1B-201ENST00000309241 CR1P17927 2039 aa5.92□□□□□ -1.46
PPARGC1B-201ENST00000309241 UNQ6190/PRO20217Q6UXQ8 127 aa5.92□□□□□ -1.46
PPARGC1B-201ENST00000309241 STAB2Q8WWQ8 2551 aa5.91□□□□□ -1.46
PPARGC1B-201ENST00000309241 LOC101927531A0A1B0GV80 90 aa5.91□□□□□ -1.46
PPARGC1B-201ENST00000309241 C16orf90A8MZG2 172 aa5.9□□□□□ -1.46
PPARGC1B-201ENST00000309241 TEX15Q9BXT5 2789 aa5.9□□□□□ -1.46
PPARGC1B-201ENST00000309241 PRLHP81277 87 aa5.9□□□□□ -1.46
PPARGC1B-201ENST00000309241 COX6B2Q6YFQ2 88 aa5.9□□□□□ -1.46
PPARGC1B-201ENST00000309241 SPACA4Q8TDM5 124 aa5.9□□□□□ -1.46
PPARGC1B-201ENST00000309241 SPAG11AQ6PDA7 123 aa5.9□□□□□ -1.47
PPARGC1B-201ENST00000309241 FAM218AQ96MZ4 157 aa5.9□□□□□ -1.47
PPARGC1B-201ENST00000309241 LINC01600Q96MT4 127 aa5.89□□□□□ -1.47
PPARGC1B-201ENST00000309241 TM2D3Q9BRN9 247 aa5.89□□□□□ -1.47
PPARGC1B-201ENST00000309241 PCOTHQ58A44 107 aa5.89□□□□□ -1.47
PPARGC1B-201ENST00000309241 SPATA3Q8NHX4 192 aa5.89□□□□□ -1.47
PPARGC1B-201ENST00000309241 COL6A5A8TX70 2615 aa5.89□□□□□ -1.47
PPARGC1B-201ENST00000309241 UNC79Q9P2D8 2635 aa5.89□□□□□ -1.47
PPARGC1B-201ENST00000309241 KLK9Q2XQG4 91 aa5.88□□□□□ -1.47
PPARGC1B-201ENST00000309241 SMIM29Q86T20 159 aa5.88□□□□□ -1.47
PPARGC1B-201ENST00000309241 SPANXA2-OT1Q8N9U9 137 aa5.88□□□□□ -1.47
PPARGC1B-201ENST00000309241 TRAV22A0A0B4J277 110 aa5.87□□□□□ -1.47
PPARGC1B-201ENST00000309241 IGLV1-51P01701 117 aa5.87□□□□□ -1.47
PPARGC1B-201ENST00000309241 GVQW2A0A096LPI5 108 aaPredicted RBP5.87□□□□□ -1.47
PPARGC1B-201ENST00000309241 TRBV7-4A0A0J9YYF1 115 aa5.87□□□□□ -1.47
PPARGC1B-201ENST00000309241 PRR3P79522 188 aaKnown RBP5.87□□□□□ -1.47
PPARGC1B-201ENST00000309241 RBM12B-AS1Q9P1G2 102 aa5.87□□□□□ -1.47
PPARGC1B-201ENST00000309241 CDSNQ15517 529 aa5.86□□□□□ -1.47
PPARGC1B-201ENST00000309241 A0A1B0GU69 56 aa5.86□□□□□ -1.47
PPARGC1B-201ENST00000309241 KRTAP10-9P60411 292 aa5.86□□□□□ -1.47
PPARGC1B-201ENST00000309241 C1orf64Q8NEQ6 169 aa5.86□□□□□ -1.47
PPARGC1B-201ENST00000309241 A0A087WSZ3 146 aa5.85□□□□□ -1.47
PPARGC1B-201ENST00000309241 COL4A2P08572 1712 aa5.85□□□□□ -1.47
PPARGC1B-201ENST00000309241 H7BZZ5 65 aa5.85□□□□□ -1.47
PPARGC1B-201ENST00000309241 ODF3L2Q3SX64 289 aa5.85□□□□□ -1.47
PPARGC1B-201ENST00000309241 A8MUN3 132 aa5.85□□□□□ -1.47
PPARGC1B-201ENST00000309241 C10orf142B7Z368 130 aa5.85□□□□□ -1.47
PPARGC1B-201ENST00000309241 Q8NBF4 154 aa5.84□□□□□ -1.47
PPARGC1B-201ENST00000309241 Q6ZQT0 140 aa5.83□□□□□ -1.48
PPARGC1B-201ENST00000309241 C16orf95Q9H693 158 aa5.83□□□□□ -1.48
PPARGC1B-201ENST00000309241 Q5XG85 94 aa5.83□□□□□ -1.48
PPARGC1B-201ENST00000309241 DEFB116Q30KQ4 102 aa5.82□□□□□ -1.48
PPARGC1B-201ENST00000309241 LCA10Q71F78 164 aa5.82□□□□□ -1.48
PPARGC1B-201ENST00000309241 LYPD5Q6UWN5 251 aa5.81□□□□□ -1.48
PPARGC1B-201ENST00000309241 KIF25-AS1Q9Y6Z4 181 aa5.81□□□□□ -1.48
PPARGC1B-201ENST00000309241 A8MTW9 85 aa5.81□□□□□ -1.48
PPARGC1B-201ENST00000309241 UQCR11O14957 56 aa5.81□□□□□ -1.48
PPARGC1B-201ENST00000309241 AVPP01185 164 aa5.81□□□□□ -1.48
PPARGC1B-201ENST00000309241 IGHV3OR16-9A0A0B4J2B5 98 aa5.81□□□□□ -1.48
PPARGC1B-201ENST00000309241 TYMSOSQ8TAI1 123 aa5.8□□□□□ -1.48
PPARGC1B-201ENST00000309241 CHD6Q8TD26 2715 aa5.8□□□□□ -1.48
PPARGC1B-201ENST00000309241 C6orf48Q9UBA6 75 aa5.8□□□□□ -1.48
PPARGC1B-201ENST00000309241 CENPFP49454 3210 aa5.79□□□□□ -1.48
PPARGC1B-201ENST00000309241 IGLV4-60A0A075B6I1 120 aa5.78□□□□□ -1.48
PPARGC1B-201ENST00000309241 Q6ZRP5 223 aa5.78□□□□□ -1.48
PPARGC1B-201ENST00000309241 RTL8CO15255 209 aa5.77□□□□□ -1.49
PPARGC1B-201ENST00000309241 Q6ZRX8 168 aa5.76□□□□□ -1.49
PPARGC1B-201ENST00000309241 ASB16-AS1Q495Z4 193 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms