RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 A0A096LNJ9 63 aa2.82□□□□□ -1.96
USH2A-201ENST00000307340 ODF3L2Q3SX64 289 aa2.82□□□□□ -1.96
USH2A-201ENST00000307340 CLPSL2Q6UWE3 100 aa2.82□□□□□ -1.96
USH2A-201ENST00000307340 C22orf34Q6ZV56 151 aa2.82□□□□□ -1.96
USH2A-201ENST00000307340 FAM19A1Q7Z5A9 133 aa2.82□□□□□ -1.96
USH2A-201ENST00000307340 ATP11AUNQ6ZP68 121 aa2.82□□□□□ -1.96
USH2A-201ENST00000307340 SSBP3-AS1Q7Z2R9 100 aa2.82□□□□□ -1.96
USH2A-201ENST00000307340 MKI67P46013 3256 aaKnown RBP2.81□□□□□ -1.96
USH2A-201ENST00000307340 REV3LO60673 3130 aa2.81□□□□□ -1.96
USH2A-201ENST00000307340 DSPP15924 2871 aaKnown RBP2.81□□□□□ -1.96
USH2A-201ENST00000307340 LINC00167Q96N53 147 aa2.81□□□□□ -1.96
USH2A-201ENST00000307340 SPRNQ5BIV9 151 aa2.81□□□□□ -1.96
USH2A-201ENST00000307340 KTN1-AS1Q86SY8 53 aa2.81□□□□□ -1.96
USH2A-201ENST00000307340 CFAP46Q8IYW2 2715 aa2.81□□□□□ -1.96
USH2A-201ENST00000307340 H0Y9P7 68 aa2.81□□□□□ -1.96
USH2A-201ENST00000307340 GCN1Q92616 2671 aaKnown RBP2.81□□□□□ -1.96
USH2A-201ENST00000307340 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.81□□□□□ -1.96
USH2A-201ENST00000307340 KCNQ1DNQ9H478 68 aa2.81□□□□□ -1.96
USH2A-201ENST00000307340 POLQO75417 2590 aa2.81□□□□□ -1.96
USH2A-201ENST00000307340 A0A087X002 238 aa2.81□□□□□ -1.96
USH2A-201ENST00000307340 CDIP1Q9H305 208 aa2.81□□□□□ -1.96
USH2A-201ENST00000307340 FLNAP21333 2647 aaKnown RBP2.81□□□□□ -1.96
USH2A-201ENST00000307340 PRO0461Q9UI25 63 aa2.8□□□□□ -1.96
USH2A-201ENST00000307340 UQCR11O14957 56 aa2.8□□□□□ -1.96
USH2A-201ENST00000307340 ITPR3Q14573 2671 aa2.8□□□□□ -1.96
USH2A-201ENST00000307340 URB1-AS1Q96HZ7 61 aa2.8□□□□□ -1.96
USH2A-201ENST00000307340 JMJD1CQ15652 2540 aa2.8□□□□□ -1.96
USH2A-201ENST00000307340 AKAP13Q12802 2813 aa2.8□□□□□ -1.96
USH2A-201ENST00000307340 WFDC10BQ8IUB3 73 aa2.8□□□□□ -1.96
USH2A-201ENST00000307340 GRNP28799 593 aaKnown RBP2.8□□□□□ -1.96
USH2A-201ENST00000307340 LUZP6Q538Z0 58 aa2.8□□□□□ -1.96
USH2A-201ENST00000307340 LINC00694P0DN24 101 aa2.8□□□□□ -1.96
USH2A-201ENST00000307340 Q9BRP9 147 aa2.8□□□□□ -1.96
USH2A-201ENST00000307340 LINC00315P59091 139 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 KALRNO60229 2985 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 SEC61BP60468 96 aaKnown RBP2.79□□□□□ -1.96
USH2A-201ENST00000307340 BBC3Q96PG8 261 aaPredicted RBP2.79□□□□□ -1.96
USH2A-201ENST00000307340 PRR15Q8IV56 129 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 SPINK1P00995 79 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 OBSCN-AS1Q96MR7 158 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 C11orf21Q9P2W6 132 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 FAM104AQ969W3 186 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 A0A0A0MQY5 61 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 A0A1B0GU69 56 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 Q6ZS46 218 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 PRUNE2Q8WUY3 3088 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 CDSNQ15517 529 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 HRCT1Q6UXD1 115 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 IGLV5-37A0A075B6J1 123 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 PROK1P58294 105 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 C7orf65Q6ZTY9 151 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 IGLV5-48A0A075B6I7 105 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 C1orf229Q6ZS94 237 aaPredicted RBP2.79□□□□□ -1.96
USH2A-201ENST00000307340 CHD6Q8TD26 2715 aa2.79□□□□□ -1.96
USH2A-201ENST00000307340 LINC00612Q8N6U2 182 aa2.78□□□□□ -1.96
USH2A-201ENST00000307340 MGAQ8IWI9 3026 aa2.78□□□□□ -1.96
USH2A-201ENST00000307340 CNBPP62633 177 aaKnown RBP2.78□□□□□ -1.96
USH2A-201ENST00000307340 PRR4Q16378 134 aa2.78□□□□□ -1.96
USH2A-201ENST00000307340 Q1T7F1 81 aa2.78□□□□□ -1.96
USH2A-201ENST00000307340 LINC00846Q9NV44 126 aa2.78□□□□□ -1.96
USH2A-201ENST00000307340 A0A096LPF7 62 aa2.78□□□□□ -1.96
USH2A-201ENST00000307340 C3orf84H3BNL1 204 aa2.77□□□□□ -1.97
USH2A-201ENST00000307340 C6orf48Q9UBA6 75 aa2.77□□□□□ -1.97
USH2A-201ENST00000307340 IGLV5-52A0A0A0MRZ9 124 aa2.77□□□□□ -1.97
USH2A-201ENST00000307340 PRB3Q04118 309 aaPredicted RBP2.77□□□□□ -1.97
USH2A-201ENST00000307340 TACC2O95359 2948 aa2.77□□□□□ -1.97
USH2A-201ENST00000307340 PLA2G2AP14555 144 aa2.77□□□□□ -1.97
USH2A-201ENST00000307340 LCA10Q71F78 164 aa2.77□□□□□ -1.97
USH2A-201ENST00000307340 C1orf64Q8NEQ6 169 aa2.77□□□□□ -1.97
USH2A-201ENST00000307340 PSPHP1O15172 72 aa2.77□□□□□ -1.97
USH2A-201ENST00000307340 FLG2Q5D862 2391 aaPredicted RBP2.77□□□□□ -1.97
USH2A-201ENST00000307340 XIRP2A4UGR9 3374 aa2.77□□□□□ -1.97
USH2A-201ENST00000307340 BOD1L1Q8NFC6 3051 aa2.77□□□□□ -1.97
USH2A-201ENST00000307340 IGLV7-46A0A075B6I9 117 aa2.77□□□□□ -1.97
USH2A-201ENST00000307340 IGKV2-28A0A075B6P5 120 aa2.77□□□□□ -1.97
USH2A-201ENST00000307340 IGKV2D-28P01615 120 aa2.77□□□□□ -1.97
USH2A-201ENST00000307340 BRCA2P51587 3418 aa2.77□□□□□ -1.97
USH2A-201ENST00000307340 LINC00313P59037 77 aa2.76□□□□□ -1.97
USH2A-201ENST00000307340 TEX15Q9BXT5 2789 aa2.76□□□□□ -1.97
USH2A-201ENST00000307340 C19orf84I3L1E1 186 aa2.76□□□□□ -1.97
USH2A-201ENST00000307340 EPG5Q9HCE0 2579 aa2.76□□□□□ -1.97
USH2A-201ENST00000307340 PRR9Q5T870 116 aa2.76□□□□□ -1.97
USH2A-201ENST00000307340 CEMP1Q6PRD7 247 aaPredicted RBP2.76□□□□□ -1.97
USH2A-201ENST00000307340 ACANP16112 2415 aa2.76□□□□□ -1.97
USH2A-201ENST00000307340 NBEAL1Q6ZS30 2694 aa2.76□□□□□ -1.97
USH2A-201ENST00000307340 A0A087WYN8 130 aa2.76□□□□□ -1.97
USH2A-201ENST00000307340 C1orf134Q5TEV5 83 aa2.76□□□□□ -1.97
USH2A-201ENST00000307340 SPRR4Q96PI1 79 aa2.76□□□□□ -1.97
USH2A-201ENST00000307340 ZNF462Q96JM2 2506 aa2.76□□□□□ -1.97
USH2A-201ENST00000307340 PRB4P10163 310 aaPredicted RBP2.76□□□□□ -1.97
USH2A-201ENST00000307340 LOC100131303A0A0U1RQF7 123 aa2.76□□□□□ -1.97
USH2A-201ENST00000307340 SPINT4Q6UDR6 99 aa2.76□□□□□ -1.97
USH2A-201ENST00000307340 FASNP49327 2511 aaKnown RBP2.76□□□□□ -1.97
USH2A-201ENST00000307340 ADGRG4Q8IZF6 3080 aa2.76□□□□□ -1.97
USH2A-201ENST00000307340 FRMD6-AS1P0C7T7 363 aa2.75□□□□□ -1.97
USH2A-201ENST00000307340 ITPR2Q14571 2701 aa2.75□□□□□ -1.97
USH2A-201ENST00000307340 M0R2N4 97 aa2.75□□□□□ -1.97
USH2A-201ENST00000307340 COX6A2Q02221 97 aa2.75□□□□□ -1.97
USH2A-201ENST00000307340 LITAFQ99732 161 aa2.75□□□□□ -1.97
USH2A-201ENST00000307340 TTTY13Q9BZ97 58 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms