RNA–Protein interactions for RNA: ENST00000307301.11

MRPL39-201, Transcript of mitochondrial ribosomal protein L39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MRPL39, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39-201ENST00000307301 HIST1H2BNQ99877 126 aa12.58□□□□□ -0.4
MRPL39-201ENST00000307301 HIST1H2BMQ99879 126 aa12.58□□□□□ -0.4
MRPL39-201ENST00000307301 VPREB1P12018 145 aa12.57□□□□□ -0.4
MRPL39-201ENST00000307301 LINC00158P58513 81 aa12.57□□□□□ -0.4
MRPL39-201ENST00000307301 A0A0U1RRA0 63 aa12.56□□□□□ -0.4
MRPL39-201ENST00000307301 ZNF861PO60384 105 aa12.56□□□□□ -0.4
MRPL39-201ENST00000307301 BCE1O60756 84 aa12.55□□□□□ -0.4
MRPL39-201ENST00000307301 PLNP26678 52 aa12.55□□□□□ -0.4
MRPL39-201ENST00000307301 Q8NDZ9 215 aa12.55□□□□□ -0.4
MRPL39-201ENST00000307301 PMCHL2Q9BQD1 86 aa12.55□□□□□ -0.4
MRPL39-201ENST00000307301 IGKV2-28A0A075B6P5 120 aa12.53□□□□□ -0.4
MRPL39-201ENST00000307301 DPM2O94777 84 aa12.53□□□□□ -0.4
MRPL39-201ENST00000307301 IGKV2D-28P01615 120 aa12.53□□□□□ -0.4
MRPL39-201ENST00000307301 KRTAP1-4P0C5Y4 121 aa12.53□□□□□ -0.4
MRPL39-201ENST00000307301 SMIM13P0DJ93 91 aa12.53□□□□□ -0.4
MRPL39-201ENST00000307301 RPL24P83731 157 aaKnown RBP12.53□□□□□ -0.4
MRPL39-201ENST00000307301 PRR26Q8N8Z3 221 aa12.53□□□□□ -0.4
MRPL39-201ENST00000307301 NDUFA12Q9UI09 145 aa12.53□□□□□ -0.4
MRPL39-201ENST00000307301 TSPEAR-AS2P59090 65 aa12.52□□□□□ -0.41
MRPL39-201ENST00000307301 HERV-K104P63124 156 aa12.52□□□□□ -0.41
MRPL39-201ENST00000307301 MEIG1Q5JSS6 88 aa12.52□□□□□ -0.41
MRPL39-201ENST00000307301 MAP1LC3CQ9BXW4 147 aa12.52□□□□□ -0.41
MRPL39-201ENST00000307301 LEPROTO15243 131 aa12.51□□□□□ -0.41
MRPL39-201ENST00000307301 IGKCP01834 107 aa12.51□□□□□ -0.41
MRPL39-201ENST00000307301 MYMXA0A1B0GTQ4 84 aa12.5□□□□□ -0.41
MRPL39-201ENST00000307301 RPL28P46779 137 aaKnown RBP12.5□□□□□ -0.41
MRPL39-201ENST00000307301 HMCN2Q8NDA2 5059 aa12.49□□□□□ -0.41
MRPL39-201ENST00000307301 IGLV1-50A0A075B6I6 118 aa12.49□□□□□ -0.41
MRPL39-201ENST00000307301 ATP6V1G1O75348 118 aa12.49□□□□□ -0.41
MRPL39-201ENST00000307301 PLEKHB2Q96CS7 222 aa12.49□□□□□ -0.41
MRPL39-201ENST00000307301 HERVK_113P61574 105 aa12.48□□□□□ -0.41
MRPL39-201ENST00000307301 MIR7-3HGQ8N6C7 128 aa12.47□□□□□ -0.41
MRPL39-201ENST00000307301 J3QQQ9 107 aa12.46□□□□□ -0.41
MRPL39-201ENST00000307301 LINC00587B1AMM8 73 aa12.45□□□□□ -0.42
MRPL39-201ENST00000307301 TMEM238C9JI98 176 aa12.45□□□□□ -0.42
MRPL39-201ENST00000307301 SYS1-DBNDD2H3BUS1 97 aa12.45□□□□□ -0.42
MRPL39-201ENST00000307301 UBE2AP49459 152 aa12.45□□□□□ -0.42
MRPL39-201ENST00000307301 KRTAP13-1Q8IUC0 172 aa12.45□□□□□ -0.42
MRPL39-201ENST00000307301 TMEM126AQ9H061 195 aa12.44□□□□□ -0.42
MRPL39-201ENST00000307301 LGALS3P17931 250 aaKnown RBP12.43□□□□□ -0.42
MRPL39-201ENST00000307301 BOD1L2Q8IYS8 172 aa12.43□□□□□ -0.42
MRPL39-201ENST00000307301 M0R378 163 aa12.42□□□□□ -0.42
MRPL39-201ENST00000307301 NMUP48645 174 aa12.41□□□□□ -0.42
MRPL39-201ENST00000307301 PRLHP81277 87 aa12.41□□□□□ -0.42
MRPL39-201ENST00000307301 COA6Q5JTJ3 125 aaKnown RBP12.4□□□□□ -0.42
MRPL39-201ENST00000307301 FAM19A1Q7Z5A9 133 aa12.4□□□□□ -0.42
MRPL39-201ENST00000307301 DAND5Q8N907 189 aa12.4□□□□□ -0.42
MRPL39-201ENST00000307301 E9PLD3 99 aa12.39□□□□□ -0.43
MRPL39-201ENST00000307301 NCR3O14931 201 aa12.39□□□□□ -0.43
MRPL39-201ENST00000307301 RPL13AP40429 203 aaKnown RBP12.39□□□□□ -0.43
MRPL39-201ENST00000307301 LINC01545Q5VT33 79 aa12.39□□□□□ -0.43
MRPL39-201ENST00000307301 PET117Q6UWS5 81 aa12.38□□□□□ -0.43
MRPL39-201ENST00000307301 C3orf79P0CE67 100 aa12.37□□□□□ -0.43
MRPL39-201ENST00000307301 A0A087X002 238 aa12.35□□□□□ -0.43
MRPL39-201ENST00000307301 IGKV2D-26A0A0A0MRZ7 120 aa12.34□□□□□ -0.43
MRPL39-201ENST00000307301 LOC107984156A0A0G2JMH3 177 aa12.34□□□□□ -0.43
MRPL39-201ENST00000307301 ARL17AQ8IVW1 177 aa12.34□□□□□ -0.43
MRPL39-201ENST00000307301 ANAPC11Q9NYG5 84 aa12.34□□□□□ -0.43
MRPL39-201ENST00000307301 A0A0J9YXY3 114 aa12.33□□□□□ -0.44
MRPL39-201ENST00000307301 KRTDAPP60985 99 aa12.33□□□□□ -0.44
MRPL39-201ENST00000307301 PRYO14603 147 aa12.32□□□□□ -0.44
MRPL39-201ENST00000307301 TRBV10-3A0A0K0K1G6 114 aa12.31□□□□□ -0.44
MRPL39-201ENST00000307301 CRYGAP11844 174 aa12.31□□□□□ -0.44
MRPL39-201ENST00000307301 S100A1P23297 94 aa12.3□□□□□ -0.44
MRPL39-201ENST00000307301 ADAMTSL4-AS1Q5T5F5 129 aa12.3□□□□□ -0.44
MRPL39-201ENST00000307301 MIEN1Q9BRT3 115 aa12.3□□□□□ -0.44
MRPL39-201ENST00000307301 LCE2AQ5TA79 106 aaPredicted RBP12.29□□□□□ -0.44
MRPL39-201ENST00000307301 HIGD2AQ9BW72 106 aa12.29□□□□□ -0.44
MRPL39-201ENST00000307301 KCNQ1DNQ9H478 68 aa12.29□□□□□ -0.44
MRPL39-201ENST00000307301 NPC2P61916 151 aa12.28□□□□□ -0.44
MRPL39-201ENST00000307301 SOSTDC1Q6X4U4 206 aa12.28□□□□□ -0.44
MRPL39-201ENST00000307301 TRBV10-2A0A0K0K1G8 114 aa12.27□□□□□ -0.45
MRPL39-201ENST00000307301 EIF4EBP3O60516 100 aaPredicted RBP12.27□□□□□ -0.45
MRPL39-201ENST00000307301 SPRR1AP35321 89 aa12.27□□□□□ -0.45
MRPL39-201ENST00000307301 TYMSOSQ8TAI1 123 aa12.27□□□□□ -0.45
MRPL39-201ENST00000307301 FAM229BQ4G0N7 80 aa12.26□□□□□ -0.45
MRPL39-201ENST00000307301 KRTAP13-2Q52LG2 175 aa12.26□□□□□ -0.45
MRPL39-201ENST00000307301 LINC00337Q8N6G1 96 aa12.26□□□□□ -0.45
MRPL39-201ENST00000307301 SPANXB1Q9NS25 103 aaPredicted RBP12.26□□□□□ -0.45
MRPL39-201ENST00000307301 KRTAP4-16G5E9R7 235 aaPredicted RBP12.25□□□□□ -0.45
MRPL39-201ENST00000307301 NDUFC2O95298 119 aa12.25□□□□□ -0.45
MRPL39-201ENST00000307301 DDTP30046 118 aa12.25□□□□□ -0.45
MRPL39-201ENST00000307301 TTTY13Q9BZ97 58 aa12.25□□□□□ -0.45
MRPL39-201ENST00000307301 C20orf202A1L168 122 aa12.24□□□□□ -0.45
MRPL39-201ENST00000307301 ZNF815PA8K554 130 aa12.24□□□□□ -0.45
MRPL39-201ENST00000307301 LITAFQ99732 161 aa12.24□□□□□ -0.45
MRPL39-201ENST00000307301 ETDCA0A1B0GVM5 59 aa12.23□□□□□ -0.45
MRPL39-201ENST00000307301 S100A12P80511 92 aa12.23□□□□□ -0.45
MRPL39-201ENST00000307301 TIMM17BO60830 172 aa12.21□□□□□ -0.45
MRPL39-201ENST00000307301 ATOH7Q8N100 152 aa12.21□□□□□ -0.45
MRPL39-201ENST00000307301 TSPAN13O95857 204 aa12.2□□□□□ -0.46
MRPL39-201ENST00000307301 S100A7L2Q5SY68 101 aa12.2□□□□□ -0.46
MRPL39-201ENST00000307301 SPRR4Q96PI1 79 aa12.2□□□□□ -0.46
MRPL39-201ENST00000307301 IGLV6-57P01721 117 aa12.19□□□□□ -0.46
MRPL39-201ENST00000307301 ANKRD39Q53RE8 183 aa12.19□□□□□ -0.46
MRPL39-201ENST00000307301 LINC00308Q8TCZ7 52 aa12.19□□□□□ -0.46
MRPL39-201ENST00000307301 UBR4Q5T4S7 5183 aa12.18□□□□□ -0.46
MRPL39-201ENST00000307301 B5MCH6 92 aa12.18□□□□□ -0.46
MRPL39-201ENST00000307301 HIST3H2BBQ8N257 126 aa12.18□□□□□ -0.46
MRPL39-201ENST00000307301 SMCR5Q8TEV8 140 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms