RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 C16orf90A8MZG2 172 aa8.71□□□□□ -1.02
USP38-201ENST00000307017 Q96NJ1 140 aa8.71□□□□□ -1.02
USP38-201ENST00000307017 LINC00476Q8WZB0 136 aa8.7□□□□□ -1.02
USP38-201ENST00000307017 LINC01561Q8N1V8 128 aa8.7□□□□□ -1.02
USP38-201ENST00000307017 LIMD2Q9BT23 127 aa8.7□□□□□ -1.02
USP38-201ENST00000307017 CXCL6P80162 114 aa8.69□□□□□ -1.02
USP38-201ENST00000307017 ABCA2Q9BZC7 2435 aa8.69□□□□□ -1.02
USP38-201ENST00000307017 M0R2T5 61 aa8.68□□□□□ -1.02
USP38-201ENST00000307017 C2CD3Q4AC94 2353 aa8.68□□□□□ -1.02
USP38-201ENST00000307017 C9orf92A6NGG3 77 aa8.68□□□□□ -1.02
USP38-201ENST00000307017 A8MUN3 132 aa8.68□□□□□ -1.02
USP38-201ENST00000307017 FHL3Q13643 280 aa8.67□□□□□ -1.02
USP38-201ENST00000307017 C11orf72Q8NBR9 251 aa8.66□□□□□ -1.02
USP38-201ENST00000307017 Q6ZQT0 140 aa8.66□□□□□ -1.02
USP38-201ENST00000307017 LINC00313P59037 77 aa8.65□□□□□ -1.02
USP38-201ENST00000307017 EPM2AB3EWF7 344 aa8.65□□□□□ -1.02
USP38-201ENST00000307017 K7EQZ3 153 aa8.64□□□□□ -1.03
USP38-201ENST00000307017 KIF25-AS1Q9Y6Z4 181 aa8.64□□□□□ -1.03
USP38-201ENST00000307017 ANAPC11Q9NYG5 84 aa8.64□□□□□ -1.03
USP38-201ENST00000307017 A0A1B0GUV1 79 aa8.63□□□□□ -1.03
USP38-201ENST00000307017 PRO0461Q9UI25 63 aa8.63□□□□□ -1.03
USP38-201ENST00000307017 VPREB1P12018 145 aa8.62□□□□□ -1.03
USP38-201ENST00000307017 CSNK1G2-AS1Q8NCQ2 148 aa8.62□□□□□ -1.03
USP38-201ENST00000307017 TYMSOSQ8TAI1 123 aa8.62□□□□□ -1.03
USP38-201ENST00000307017 C9orf129Q5T035 196 aaKnown RBP8.62□□□□□ -1.03
USP38-201ENST00000307017 ZNF575Q86XF7 245 aa8.62□□□□□ -1.03
USP38-201ENST00000307017 XIRP2A4UGR9 3374 aa8.61□□□□□ -1.03
USP38-201ENST00000307017 ANKHD1Q8IWZ3 2542 aaKnown RBP8.61□□□□□ -1.03
USP38-201ENST00000307017 IGLV6-57P01721 117 aa8.61□□□□□ -1.03
USP38-201ENST00000307017 DSCR10P59022 87 aa8.61□□□□□ -1.03
USP38-201ENST00000307017 LINC00315P59091 139 aa8.6□□□□□ -1.03
USP38-201ENST00000307017 A0A0D9SG42 100 aa8.6□□□□□ -1.03
USP38-201ENST00000307017 IGHV3OR16-9A0A0B4J2B5 98 aa8.6□□□□□ -1.03
USP38-201ENST00000307017 Q6ZRP5 223 aa8.59□□□□□ -1.03
USP38-201ENST00000307017 PCSK5Q92824 1860 aa8.59□□□□□ -1.03
USP38-201ENST00000307017 C8orf87E5RJ46 101 aa8.59□□□□□ -1.03
USP38-201ENST00000307017 RTL8CO15255 209 aa8.59□□□□□ -1.03
USP38-201ENST00000307017 ELOF1P60002 83 aaKnown RBP8.59□□□□□ -1.03
USP38-201ENST00000307017 PLA2G2DQ9UNK4 145 aa8.58□□□□□ -1.04
USP38-201ENST00000307017 TRBV7-4A0A0J9YYF1 115 aa8.58□□□□□ -1.04
USP38-201ENST00000307017 EIF4EBP3O60516 100 aaPredicted RBP8.58□□□□□ -1.04
USP38-201ENST00000307017 CRIPTQ9P021 101 aa8.58□□□□□ -1.04
USP38-201ENST00000307017 IGLV5-39A0A0G2JS06 123 aa8.58□□□□□ -1.04
USP38-201ENST00000307017 COA5Q86WW8 74 aa8.57□□□□□ -1.04
USP38-201ENST00000307017 LINC01600Q96MT4 127 aa8.56□□□□□ -1.04
USP38-201ENST00000307017 DNAH10OSP0CZ25 163 aa8.55□□□□□ -1.04
USP38-201ENST00000307017 NOTCH2Q04721 2471 aa8.55□□□□□ -1.04
USP38-201ENST00000307017 C16orf95Q9H693 158 aa8.54□□□□□ -1.04
USP38-201ENST00000307017 TRAV22A0A0B4J277 110 aa8.53□□□□□ -1.04
USP38-201ENST00000307017 Q6ZRX8 168 aa8.53□□□□□ -1.04
USP38-201ENST00000307017 SMR3BP02814 79 aaPredicted RBP8.52□□□□□ -1.05
USP38-201ENST00000307017 LINC00588Q9Y4M8 146 aa8.51□□□□□ -1.05
USP38-201ENST00000307017 COX8CQ7Z4L0 72 aa8.51□□□□□ -1.05
USP38-201ENST00000307017 OBSCN-AS1Q96MR7 158 aa8.51□□□□□ -1.05
USP38-201ENST00000307017 LINC01546A6NGU7 62 aa8.51□□□□□ -1.05
USP38-201ENST00000307017 CEP350Q5VT06 3117 aa8.5□□□□□ -1.05
USP38-201ENST00000307017 DOPEY1Q5JWR5 2465 aa8.49□□□□□ -1.05
USP38-201ENST00000307017 FN1P02751 2386 aaKnown RBP8.48□□□□□ -1.05
USP38-201ENST00000307017 LINC00336Q6ZUF6 198 aa8.48□□□□□ -1.05
USP38-201ENST00000307017 Q8NBF4 154 aa8.47□□□□□ -1.05
USP38-201ENST00000307017 CCDC168Q8NDH2 2452 aa8.47□□□□□ -1.05
USP38-201ENST00000307017 MKI67P46013 3256 aaKnown RBP8.46□□□□□ -1.05
USP38-201ENST00000307017 IGLV5-37A0A075B6J1 123 aa8.46□□□□□ -1.05
USP38-201ENST00000307017 C15orf56Q8N910 161 aa8.46□□□□□ -1.06
USP38-201ENST00000307017 PSORS1C2Q9UIG4 136 aa8.45□□□□□ -1.06
USP38-201ENST00000307017 TP53AIP1Q9HCN2 124 aa8.45□□□□□ -1.06
USP38-201ENST00000307017 LITAFQ99732 161 aa8.45□□□□□ -1.06
USP38-201ENST00000307017 Q8N1X5 172 aa8.44□□□□□ -1.06
USP38-201ENST00000307017 WIPF1O43516 503 aa8.44□□□□□ -1.06
USP38-201ENST00000307017 DNAH14Q0VDD8 3507 aa8.44□□□□□ -1.06
USP38-201ENST00000307017 PRO3102Q9H379 93 aa8.44□□□□□ -1.06
USP38-201ENST00000307017 LOC110117498A0A087WWA1 95 aa8.43□□□□□ -1.06
USP38-201ENST00000307017 LUZP6Q538Z0 58 aa8.43□□□□□ -1.06
USP38-201ENST00000307017 MIR22HGQ0VDD5 57 aa8.42□□□□□ -1.06
USP38-201ENST00000307017 IGFL1Q6UW32 110 aa8.42□□□□□ -1.06
USP38-201ENST00000307017 TTC28Q96AY4 2481 aa8.42□□□□□ -1.06
USP38-201ENST00000307017 ACACBO00763 2458 aa8.4□□□□□ -1.06
USP38-201ENST00000307017 A8MWP4 228 aa8.4□□□□□ -1.06
USP38-201ENST00000307017 KRTAP24-1Q3LI83 254 aa8.4□□□□□ -1.07
USP38-201ENST00000307017 PLAC4Q8WY50 150 aa8.39□□□□□ -1.07
USP38-201ENST00000307017 MRPL34Q9BQ48 92 aaKnown RBP8.39□□□□□ -1.07
USP38-201ENST00000307017 LRRK2Q5S007 2527 aa8.39□□□□□ -1.07
USP38-201ENST00000307017 COL4A2P08572 1712 aa8.39□□□□□ -1.07
USP38-201ENST00000307017 IGLV5-45A0A087WSX0 123 aa8.39□□□□□ -1.07
USP38-201ENST00000307017 NBDYA0A0U1RRE5 68 aa8.38□□□□□ -1.07
USP38-201ENST00000307017 BCE1O60756 84 aa8.38□□□□□ -1.07
USP38-201ENST00000307017 Q8NAQ8 132 aa8.38□□□□□ -1.07
USP38-201ENST00000307017 CELSR3Q9NYQ7 3312 aa8.38□□□□□ -1.07
USP38-201ENST00000307017 IGF2RP11717 2491 aa8.37□□□□□ -1.07
USP38-201ENST00000307017 F8WDY8 70 aa8.37□□□□□ -1.07
USP38-201ENST00000307017 CDH23Q9H251 3354 aa8.36□□□□□ -1.07
USP38-201ENST00000307017 RPS28P62857 69 aaKnown RBP8.36□□□□□ -1.07
USP38-201ENST00000307017 IGLV5-48A0A075B6I7 105 aa8.36□□□□□ -1.07
USP38-201ENST00000307017 CASC10Q5T4H9 136 aa8.36□□□□□ -1.07
USP38-201ENST00000307017 TLX1NBP0CAT3 122 aa8.35□□□□□ -1.07
USP38-201ENST00000307017 KRTAP10-11P60412 298 aa8.35□□□□□ -1.07
USP38-201ENST00000307017 RBM12B-AS1Q9P1G2 102 aa8.35□□□□□ -1.07
USP38-201ENST00000307017 CAMK2N1Q7Z7J9 78 aa8.34□□□□□ -1.07
USP38-201ENST00000307017 PRR15Q8IV56 129 aa8.34□□□□□ -1.07
USP38-201ENST00000307017 MYO9AB2RTY4 2548 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms