RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 A0A087WZ39 114 aa10.09□□□□□ -0.79
PTPN9-201ENST00000306726 RBM3P98179 157 aaKnown RBP10.09□□□□□ -0.79
PTPN9-201ENST00000306726 OVOL2Q9BRP0 275 aa10.09□□□□□ -0.79
PTPN9-201ENST00000306726 CMC4P56277 68 aaPredicted RBP10.08□□□□□ -0.8
PTPN9-201ENST00000306726 FBN1P35555 2871 aaKnown RBP10.08□□□□□ -0.8
PTPN9-201ENST00000306726 M0R2N4 97 aa10.08□□□□□ -0.8
PTPN9-201ENST00000306726 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.08□□□□□ -0.8
PTPN9-201ENST00000306726 PRO0255Q9UI72 69 aa10.08□□□□□ -0.8
PTPN9-201ENST00000306726 ZNF469Q96JG9 3925 aaPredicted RBP10.07□□□□□ -0.8
PTPN9-201ENST00000306726 SPATA3Q8NHX4 192 aa10.07□□□□□ -0.8
PTPN9-201ENST00000306726 C3orf84H3BNL1 204 aa10.07□□□□□ -0.8
PTPN9-201ENST00000306726 ZNF561-AS1K7EIQ3 104 aa10.07□□□□□ -0.8
PTPN9-201ENST00000306726 C4orf26Q17RF5 130 aa10.06□□□□□ -0.8
PTPN9-201ENST00000306726 LINC01561Q8N1V8 128 aa10.06□□□□□ -0.8
PTPN9-201ENST00000306726 SERP2Q8N6R1 65 aa10.06□□□□□ -0.8
PTPN9-201ENST00000306726 KRTAP21-3Q3LHN1 58 aa10.06□□□□□ -0.8
PTPN9-201ENST00000306726 Q8N814 137 aa10.06□□□□□ -0.8
PTPN9-201ENST00000306726 C22orf24Q9Y442 160 aa10.06□□□□□ -0.8
PTPN9-201ENST00000306726 KRTAP10-3P60369 221 aa10.05□□□□□ -0.8
PTPN9-201ENST00000306726 C9orf66Q5T8R8 295 aa10.04□□□□□ -0.8
PTPN9-201ENST00000306726 IMUPQ9GZP8 106 aa10.04□□□□□ -0.8
PTPN9-201ENST00000306726 LRCOL1A6NCL2 159 aa10.04□□□□□ -0.8
PTPN9-201ENST00000306726 TMEM256-PLSCR3K7ERE1 68 aa10.03□□□□□ -0.8
PTPN9-201ENST00000306726 CAMK2N2Q96S95 79 aa10.03□□□□□ -0.8
PTPN9-201ENST00000306726 CSDC2Q9Y534 153 aaKnown RBP10.03□□□□□ -0.8
PTPN9-201ENST00000306726 IGKV2D-24A0A075B6R9 120 aa10.02□□□□□ -0.81
PTPN9-201ENST00000306726 RETNQ9HD89 108 aa10.02□□□□□ -0.81
PTPN9-201ENST00000306726 PLAC8L1A1L4L8 177 aa10.02□□□□□ -0.81
PTPN9-201ENST00000306726 TRBV10-3A0A0K0K1G6 114 aa10.02□□□□□ -0.81
PTPN9-201ENST00000306726 MPLKIPQ8TAP9 179 aa10.01□□□□□ -0.81
PTPN9-201ENST00000306726 RMI2Q96E14 147 aa10.01□□□□□ -0.81
PTPN9-201ENST00000306726 CELA1Q9UNI1 258 aa10.01□□□□□ -0.81
PTPN9-201ENST00000306726 PRR4Q16378 134 aa10.01□□□□□ -0.81
PTPN9-201ENST00000306726 CCKP06307 115 aa10.01□□□□□ -0.81
PTPN9-201ENST00000306726 DEFB121Q5J5C9 76 aa10.01□□□□□ -0.81
PTPN9-201ENST00000306726 IGLV1-51P01701 117 aa9.99□□□□□ -0.81
PTPN9-201ENST00000306726 JMJD7-PLA2G4BH0Y9G9 81 aa9.99□□□□□ -0.81
PTPN9-201ENST00000306726 Q8NDZ9 215 aa9.99□□□□□ -0.81
PTPN9-201ENST00000306726 TRAV10A0A0B4J240 114 aa9.98□□□□□ -0.81
PTPN9-201ENST00000306726 SMIM9A6NGZ8 99 aa9.98□□□□□ -0.81
PTPN9-201ENST00000306726 Q6JHZ5 121 aa9.98□□□□□ -0.81
PTPN9-201ENST00000306726 WIPF1O43516 503 aa9.97□□□□□ -0.81
PTPN9-201ENST00000306726 CD164L2Q6UWJ8 174 aa9.97□□□□□ -0.81
PTPN9-201ENST00000306726 A0A0U1RQV1 116 aa9.97□□□□□ -0.81
PTPN9-201ENST00000306726 RPL37AP8A6NKH3 93 aa9.97□□□□□ -0.81
PTPN9-201ENST00000306726 MRAPQ8TCY5 172 aa9.96□□□□□ -0.81
PTPN9-201ENST00000306726 Q8IZM0 81 aa9.95□□□□□ -0.82
PTPN9-201ENST00000306726 PKIGQ9Y2B9 76 aa9.95□□□□□ -0.82
PTPN9-201ENST00000306726 DIRC1Q969H9 104 aa9.94□□□□□ -0.82
PTPN9-201ENST00000306726 F8WEM9 126 aa9.94□□□□□ -0.82
PTPN9-201ENST00000306726 C1orf43Q9BWL3 253 aa9.94□□□□□ -0.82
PTPN9-201ENST00000306726 DPH3Q96FX2 82 aa9.93□□□□□ -0.82
PTPN9-201ENST00000306726 C2orf48Q96LS8 159 aa9.93□□□□□ -0.82
PTPN9-201ENST00000306726 OXLD1Q5BKU9 147 aa9.92□□□□□ -0.82
PTPN9-201ENST00000306726 A0A096LNI7 61 aa9.91□□□□□ -0.82
PTPN9-201ENST00000306726 WFDC10BQ8IUB3 73 aa9.91□□□□□ -0.82
PTPN9-201ENST00000306726 DEFB116Q30KQ4 102 aa9.91□□□□□ -0.82
PTPN9-201ENST00000306726 Q6ZVQ6 151 aa9.91□□□□□ -0.82
PTPN9-201ENST00000306726 FAM236DA0A1B0GTK5 79 aa9.91□□□□□ -0.82
PTPN9-201ENST00000306726 FAM236CP0DP71 79 aa9.91□□□□□ -0.82
PTPN9-201ENST00000306726 CSNK1G2-AS1Q8NCQ2 148 aa9.91□□□□□ -0.82
PTPN9-201ENST00000306726 TENM3Q9P273 2699 aa9.91□□□□□ -0.82
PTPN9-201ENST00000306726 NANOS2P60321 138 aaKnown RBP9.9□□□□□ -0.82
PTPN9-201ENST00000306726 COX7BP24311 80 aa9.9□□□□□ -0.82
PTPN9-201ENST00000306726 LINC01547P58512 204 aaPredicted RBP9.9□□□□□ -0.82
PTPN9-201ENST00000306726 SPART-AS1P0CW21 52 aa9.9□□□□□ -0.83
PTPN9-201ENST00000306726 NKAPP1Q8N9T2 125 aa9.9□□□□□ -0.83
PTPN9-201ENST00000306726 BPY2O14599 106 aa9.89□□□□□ -0.83
PTPN9-201ENST00000306726 C19orf73Q9NVV2 129 aa9.89□□□□□ -0.83
PTPN9-201ENST00000306726 TRRAPQ9Y4A5 3859 aa9.89□□□□□ -0.83
PTPN9-201ENST00000306726 NREPQ16612 68 aa9.89□□□□□ -0.83
PTPN9-201ENST00000306726 LINC00575Q6W349 94 aa9.89□□□□□ -0.83
PTPN9-201ENST00000306726 X6R8D5 127 aa9.89□□□□□ -0.83
PTPN9-201ENST00000306726 CRYGAP11844 174 aa9.89□□□□□ -0.83
PTPN9-201ENST00000306726 A0A0G2JQZ4 141 aa9.88□□□□□ -0.83
PTPN9-201ENST00000306726 A0A1W2PNN7 141 aa9.88□□□□□ -0.83
PTPN9-201ENST00000306726 TM2D3Q9BRN9 247 aa9.88□□□□□ -0.83
PTPN9-201ENST00000306726 ZNF73O43830 326 aaPredicted RBP9.88□□□□□ -0.83
PTPN9-201ENST00000306726 TMEM258P61165 79 aa9.87□□□□□ -0.83
PTPN9-201ENST00000306726 IL17DQ8TAD2 202 aa9.87□□□□□ -0.83
PTPN9-201ENST00000306726 BRK1Q8WUW1 75 aa9.87□□□□□ -0.83
PTPN9-201ENST00000306726 OXTP01178 125 aa9.86□□□□□ -0.83
PTPN9-201ENST00000306726 C5orf47Q569G3 176 aa9.86□□□□□ -0.83
PTPN9-201ENST00000306726 KIAA0087Q14695 138 aa9.85□□□□□ -0.83
PTPN9-201ENST00000306726 FAM30AQ9NZY2 134 aa9.85□□□□□ -0.83
PTPN9-201ENST00000306726 APOC4P55056 127 aa9.84□□□□□ -0.83
PTPN9-201ENST00000306726 EGFEM1PQ0D2K5 195 aa9.84□□□□□ -0.83
PTPN9-201ENST00000306726 MDFIQ99750 246 aa9.84□□□□□ -0.83
PTPN9-201ENST00000306726 IGKV2-24A0A0C4DH68 120 aa9.84□□□□□ -0.83
PTPN9-201ENST00000306726 C6orf48Q9UBA6 75 aa9.84□□□□□ -0.83
PTPN9-201ENST00000306726 UBE2BP63146 152 aa9.83□□□□□ -0.84
PTPN9-201ENST00000306726 Q6ZRU5 148 aa9.83□□□□□ -0.84
PTPN9-201ENST00000306726 LINC00474Q9P2X8 69 aa9.83□□□□□ -0.84
PTPN9-201ENST00000306726 MUC7Q8TAX7 377 aa9.83□□□□□ -0.84
PTPN9-201ENST00000306726 IGHV4-30-4P0DP06 118 aa9.82□□□□□ -0.84
PTPN9-201ENST00000306726 Q6ZTC4 211 aa9.82□□□□□ -0.84
PTPN9-201ENST00000306726 KPRPQ5T749 579 aaPredicted RBP9.82□□□□□ -0.84
PTPN9-201ENST00000306726 A0A1B0GUV1 79 aa9.81□□□□□ -0.84
PTPN9-201ENST00000306726 Q6ZQT0 140 aa9.81□□□□□ -0.84
PTPN9-201ENST00000306726 LINC01600Q96MT4 127 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms