RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 Q8N2B8 174 aa9.5□□□□□ -0.89
TRIM56-201ENST00000306085 SMCR5Q8TEV8 140 aa9.5□□□□□ -0.89
TRIM56-201ENST00000306085 LINC00310P59036 64 aa9.5□□□□□ -0.89
TRIM56-201ENST00000306085 Q8NA96 180 aa9.5□□□□□ -0.89
TRIM56-201ENST00000306085 WISP2O76076 250 aa9.49□□□□□ -0.89
TRIM56-201ENST00000306085 SPATA3Q8NHX4 192 aa9.49□□□□□ -0.89
TRIM56-201ENST00000306085 BPTFQ12830 3046 aa9.49□□□□□ -0.89
TRIM56-201ENST00000306085 F8WDY8 70 aa9.49□□□□□ -0.89
TRIM56-201ENST00000306085 CD164Q04900 197 aa9.49□□□□□ -0.89
TRIM56-201ENST00000306085 Q6ZPA2 131 aa9.48□□□□□ -0.89
TRIM56-201ENST00000306085 EDN2P20800 178 aa9.48□□□□□ -0.89
TRIM56-201ENST00000306085 COL4A4P53420 1690 aaPredicted RBP9.47□□□□□ -0.89
TRIM56-201ENST00000306085 FHL2Q14192 279 aa9.47□□□□□ -0.89
TRIM56-201ENST00000306085 Q6ZRU5 148 aa9.46□□□□□ -0.89
TRIM56-201ENST00000306085 C22orf24Q9Y442 160 aa9.46□□□□□ -0.9
TRIM56-201ENST00000306085 AMELXQ99217 191 aa9.46□□□□□ -0.9
TRIM56-201ENST00000306085 MAST4O15021 2626 aa9.45□□□□□ -0.9
TRIM56-201ENST00000306085 Q96NJ1 140 aa9.44□□□□□ -0.9
TRIM56-201ENST00000306085 LINC01554Q52M75 96 aa9.43□□□□□ -0.9
TRIM56-201ENST00000306085 C9orf129Q5T035 196 aaKnown RBP9.43□□□□□ -0.9
TRIM56-201ENST00000306085 CHTF8P0CG12 524 aa9.43□□□□□ -0.9
TRIM56-201ENST00000306085 IGLV1-40P01703 118 aa9.43□□□□□ -0.9
TRIM56-201ENST00000306085 DMBT1Q9UGM3 2413 aaPredicted RBP9.43□□□□□ -0.9
TRIM56-201ENST00000306085 RPL37AP61513 92 aaKnown RBP9.42□□□□□ -0.9
TRIM56-201ENST00000306085 TM2D3Q9BRN9 247 aa9.42□□□□□ -0.9
TRIM56-201ENST00000306085 A0A1W2PNU3 283 aaPredicted RBP9.42□□□□□ -0.9
TRIM56-201ENST00000306085 A0A1B0GUV1 79 aa9.42□□□□□ -0.9
TRIM56-201ENST00000306085 LUZP6Q538Z0 58 aa9.42□□□□□ -0.9
TRIM56-201ENST00000306085 UQCR11O14957 56 aa9.41□□□□□ -0.9
TRIM56-201ENST00000306085 Q6ZSN1 163 aa9.41□□□□□ -0.9
TRIM56-201ENST00000306085 LTBP2Q14767 1821 aa9.41□□□□□ -0.9
TRIM56-201ENST00000306085 LYPD5Q6UWN5 251 aa9.41□□□□□ -0.9
TRIM56-201ENST00000306085 COL4A3Q01955 1670 aa9.41□□□□□ -0.9
TRIM56-201ENST00000306085 COX6B2Q6YFQ2 88 aa9.4□□□□□ -0.91
TRIM56-201ENST00000306085 MGAM2Q2M2H8 2515 aa9.4□□□□□ -0.91
TRIM56-201ENST00000306085 ODF3L2Q3SX64 289 aa9.39□□□□□ -0.91
TRIM56-201ENST00000306085 H3BPC8 53 aa9.39□□□□□ -0.91
TRIM56-201ENST00000306085 COA5Q86WW8 74 aa9.39□□□□□ -0.91
TRIM56-201ENST00000306085 MIR22HGQ0VDD5 57 aa9.39□□□□□ -0.91
TRIM56-201ENST00000306085 SMR3AQ99954 134 aa9.39□□□□□ -0.91
TRIM56-201ENST00000306085 LINC01561Q8N1V8 128 aa9.38□□□□□ -0.91
TRIM56-201ENST00000306085 TYMSOSQ8TAI1 123 aa9.38□□□□□ -0.91
TRIM56-201ENST00000306085 C11orf71Q6IPW1 123 aa9.37□□□□□ -0.91
TRIM56-201ENST00000306085 EPM2AB3EWF7 344 aa9.37□□□□□ -0.91
TRIM56-201ENST00000306085 A8MUN3 132 aa9.37□□□□□ -0.91
TRIM56-201ENST00000306085 URB1-AS1Q96HZ7 61 aa9.36□□□□□ -0.91
TRIM56-201ENST00000306085 C11orf72Q8NBR9 251 aa9.36□□□□□ -0.91
TRIM56-201ENST00000306085 FAM19A4Q96LR4 140 aa9.36□□□□□ -0.91
TRIM56-201ENST00000306085 IGLV6-57P01721 117 aa9.35□□□□□ -0.91
TRIM56-201ENST00000306085 LINC00476Q8WZB0 136 aa9.35□□□□□ -0.91
TRIM56-201ENST00000306085 KTN1-AS1Q86SY8 53 aa9.34□□□□□ -0.91
TRIM56-201ENST00000306085 Q6ZQT0 140 aa9.34□□□□□ -0.91
TRIM56-201ENST00000306085 LINC00167Q96N53 147 aa9.33□□□□□ -0.92
TRIM56-201ENST00000306085 A0A0D9SG42 100 aa9.32□□□□□ -0.92
TRIM56-201ENST00000306085 Q8NBF4 154 aa9.32□□□□□ -0.92
TRIM56-201ENST00000306085 CYP4F30PQ9H0H9 118 aa9.32□□□□□ -0.92
TRIM56-201ENST00000306085 IGLV1-51P01701 117 aa9.31□□□□□ -0.92
TRIM56-201ENST00000306085 LOC101927531A0A1B0GV80 90 aa9.31□□□□□ -0.92
TRIM56-201ENST00000306085 BCE1O60756 84 aa9.31□□□□□ -0.92
TRIM56-201ENST00000306085 CRIP3Q6Q6R5 217 aa9.31□□□□□ -0.92
TRIM56-201ENST00000306085 FAM229AH3BQW9 127 aa9.3□□□□□ -0.92
TRIM56-201ENST00000306085 CENPEQ02224 2701 aa9.3□□□□□ -0.92
TRIM56-201ENST00000306085 FAM218AQ96MZ4 157 aa9.3□□□□□ -0.92
TRIM56-201ENST00000306085 ERC2-IT1O76042 136 aa9.29□□□□□ -0.92
TRIM56-201ENST00000306085 CDC42SE1Q9NRR8 79 aa9.28□□□□□ -0.92
TRIM56-201ENST00000306085 PHF5AQ7RTV0 110 aaKnown RBP9.28□□□□□ -0.92
TRIM56-201ENST00000306085 Q6ZRX8 168 aa9.28□□□□□ -0.92
TRIM56-201ENST00000306085 LOC110117498A0A087WWA1 95 aa9.28□□□□□ -0.92
TRIM56-201ENST00000306085 H3BS24 57 aa9.27□□□□□ -0.93
TRIM56-201ENST00000306085 ELOF1P60002 83 aaKnown RBP9.27□□□□□ -0.93
TRIM56-201ENST00000306085 PRO0461Q9UI25 63 aa9.27□□□□□ -0.93
TRIM56-201ENST00000306085 A0A1B0GW54 56 aa9.27□□□□□ -0.93
TRIM56-201ENST00000306085 LINC00336Q6ZUF6 198 aa9.26□□□□□ -0.93
TRIM56-201ENST00000306085 STAB1Q9NY15 2570 aa9.26□□□□□ -0.93
TRIM56-201ENST00000306085 CSNK1G2-AS1Q8NCQ2 148 aa9.26□□□□□ -0.93
TRIM56-201ENST00000306085 A0A096LNJ9 63 aa9.25□□□□□ -0.93
TRIM56-201ENST00000306085 NOTCH1P46531 2555 aa9.25□□□□□ -0.93
TRIM56-201ENST00000306085 TRBV7-4A0A0J9YYF1 115 aa9.25□□□□□ -0.93
TRIM56-201ENST00000306085 LCA10Q71F78 164 aa9.25□□□□□ -0.93
TRIM56-201ENST00000306085 K7EQZ3 153 aa9.24□□□□□ -0.93
TRIM56-201ENST00000306085 A8MWP4 228 aa9.24□□□□□ -0.93
TRIM56-201ENST00000306085 ST20-AS1Q8NBB2 130 aa9.23□□□□□ -0.93
TRIM56-201ENST00000306085 J3QL48 77 aa9.23□□□□□ -0.93
TRIM56-201ENST00000306085 SMCPP49901 116 aaPredicted RBP9.23□□□□□ -0.93
TRIM56-201ENST00000306085 FHL3Q13643 280 aa9.23□□□□□ -0.93
TRIM56-201ENST00000306085 IGLV5-39A0A0G2JS06 123 aa9.22□□□□□ -0.93
TRIM56-201ENST00000306085 Q6ZRP5 223 aa9.22□□□□□ -0.93
TRIM56-201ENST00000306085 KIF25-AS1Q9Y6Z4 181 aa9.22□□□□□ -0.93
TRIM56-201ENST00000306085 AVPP01185 164 aa9.22□□□□□ -0.93
TRIM56-201ENST00000306085 NBEAL1Q6ZS30 2694 aa9.22□□□□□ -0.93
TRIM56-201ENST00000306085 C16orf90A8MZG2 172 aa9.21□□□□□ -0.93
TRIM56-201ENST00000306085 NHLRC4P0CG21 123 aaPredicted RBP9.21□□□□□ -0.93
TRIM56-201ENST00000306085 RTL8CO15255 209 aa9.2□□□□□ -0.94
TRIM56-201ENST00000306085 C9orf92A6NGG3 77 aa9.2□□□□□ -0.94
TRIM56-201ENST00000306085 OBSCN-AS1Q96MR7 158 aa9.19□□□□□ -0.94
TRIM56-201ENST00000306085 MRPL34Q9BQ48 92 aaKnown RBP9.17□□□□□ -0.94
TRIM56-201ENST00000306085 IGHV3OR16-9A0A0B4J2B5 98 aa9.17□□□□□ -0.94
TRIM56-201ENST00000306085 DSCR10P59022 87 aa9.17□□□□□ -0.94
TRIM56-201ENST00000306085 PRR15Q8IV56 129 aa9.16□□□□□ -0.94
TRIM56-201ENST00000306085 STAB2Q8WWQ8 2551 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms