RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 OSTCQ9NRP0 149 aa3.72□□□□□ -1.81
ITGB1-201ENST00000302278 VCYO14598 125 aa3.71□□□□□ -1.81
ITGB1-201ENST00000302278 BCE1O60756 84 aa3.71□□□□□ -1.81
ITGB1-201ENST00000302278 FAM19A3Q7Z5A8 133 aa3.71□□□□□ -1.81
ITGB1-201ENST00000302278 RAB37Q96AX2 223 aa3.71□□□□□ -1.81
ITGB1-201ENST00000302278 KRTAP4-1Q9BYQ7 146 aa3.71□□□□□ -1.81
ITGB1-201ENST00000302278 LINC01547P58512 204 aaPredicted RBP3.71□□□□□ -1.82
ITGB1-201ENST00000302278 Q6ZUT4 128 aa3.71□□□□□ -1.82
ITGB1-201ENST00000302278 IGLV5-37A0A075B6J1 123 aa3.71□□□□□ -1.82
ITGB1-201ENST00000302278 SPANXA1Q9NS26 97 aa3.71□□□□□ -1.82
ITGB1-201ENST00000302278 RPL28P46779 137 aaKnown RBP3.7□□□□□ -1.82
ITGB1-201ENST00000302278 HSD52Q0P140 79 aa3.7□□□□□ -1.82
ITGB1-201ENST00000302278 KRTAP13-3Q3SY46 172 aa3.7□□□□□ -1.82
ITGB1-201ENST00000302278 UNQ6190/PRO20217Q6UXQ8 127 aa3.7□□□□□ -1.82
ITGB1-201ENST00000302278 IGLV7-46A0A075B6I9 117 aa3.7□□□□□ -1.82
ITGB1-201ENST00000302278 A8MWL6 223 aa3.7□□□□□ -1.82
ITGB1-201ENST00000302278 SMIM13P0DJ93 91 aa3.7□□□□□ -1.82
ITGB1-201ENST00000302278 BVES-AS1Q5T3Y7 98 aa3.7□□□□□ -1.82
ITGB1-201ENST00000302278 C5orf38Q86SI9 138 aa3.7□□□□□ -1.82
ITGB1-201ENST00000302278 TSPAN13O95857 204 aa3.7□□□□□ -1.82
ITGB1-201ENST00000302278 UBE2BP63146 152 aa3.7□□□□□ -1.82
ITGB1-201ENST00000302278 LINC00304Q8N9R0 145 aa3.7□□□□□ -1.82
ITGB1-201ENST00000302278 FCER1GP30273 86 aa3.69□□□□□ -1.82
ITGB1-201ENST00000302278 TMEM136Q6ZRR5 245 aa3.69□□□□□ -1.82
ITGB1-201ENST00000302278 C20orf78Q9BR46 151 aa3.69□□□□□ -1.82
ITGB1-201ENST00000302278 H3BRM9 83 aa3.69□□□□□ -1.82
ITGB1-201ENST00000302278 TAX1BP3O14907 124 aa3.69□□□□□ -1.82
ITGB1-201ENST00000302278 LINC00173Q6ZV60 143 aa3.69□□□□□ -1.82
ITGB1-201ENST00000302278 CHCHD1Q96BP2 118 aaKnown RBP3.69□□□□□ -1.82
ITGB1-201ENST00000302278 CDIP1Q9H305 208 aa3.69□□□□□ -1.82
ITGB1-201ENST00000302278 C9orf118A6NHY6 69 aa3.69□□□□□ -1.82
ITGB1-201ENST00000302278 SYS1-DBNDD2H3BUS1 97 aa3.69□□□□□ -1.82
ITGB1-201ENST00000302278 SUMO2P61956 95 aaKnown RBP3.69□□□□□ -1.82
ITGB1-201ENST00000302278 LYRM7Q5U5X0 104 aa3.69□□□□□ -1.82
ITGB1-201ENST00000302278 C18orf32Q8TCD1 76 aa3.69□□□□□ -1.82
ITGB1-201ENST00000302278 PYGO1Q9Y3Y4 419 aa3.69□□□□□ -1.82
ITGB1-201ENST00000302278 C22orf24Q9Y442 160 aa3.69□□□□□ -1.82
ITGB1-201ENST00000302278 K7EP34 96 aa3.68□□□□□ -1.82
ITGB1-201ENST00000302278 CFC1BP0CG36 223 aa3.68□□□□□ -1.82
ITGB1-201ENST00000302278 HBBP68871 147 aa3.68□□□□□ -1.82
ITGB1-201ENST00000302278 TRAV13-1A0A0B4J241 112 aa3.68□□□□□ -1.82
ITGB1-201ENST00000302278 NMUP48645 174 aa3.68□□□□□ -1.82
ITGB1-201ENST00000302278 LORP23490 312 aaPredicted RBP3.68□□□□□ -1.82
ITGB1-201ENST00000302278 RIGQ13278 110 aa3.68□□□□□ -1.82
ITGB1-201ENST00000302278 GEMIN7Q9H840 131 aaKnown RBP3.68□□□□□ -1.82
ITGB1-201ENST00000302278 ATP5L2Q7Z4Y8 100 aa3.67□□□□□ -1.82
ITGB1-201ENST00000302278 KIR2DL4Q99706 377 aa3.67□□□□□ -1.82
ITGB1-201ENST00000302278 VCX2Q9H322 139 aa3.67□□□□□ -1.82
ITGB1-201ENST00000302278 PPDPFQ9H3Y8 114 aa3.67□□□□□ -1.82
ITGB1-201ENST00000302278 CYSLTR1Q9Y271 337 aa3.67□□□□□ -1.82
ITGB1-201ENST00000302278 A0A1B0GUT8 65 aa3.67□□□□□ -1.82
ITGB1-201ENST00000302278 SPAG11AQ6PDA7 123 aa3.67□□□□□ -1.82
ITGB1-201ENST00000302278 MRPL55Q7Z7F7 128 aaKnown RBP3.67□□□□□ -1.82
ITGB1-201ENST00000302278 HIGD1CA8MV81 97 aa3.66□□□□□ -1.82
ITGB1-201ENST00000302278 GAGE2EQ4V326 116 aa3.66□□□□□ -1.82
ITGB1-201ENST00000302278 GAGE2DQ9UEU5 116 aa3.66□□□□□ -1.82
ITGB1-201ENST00000302278 V9GYV3 84 aa3.66□□□□□ -1.82
ITGB1-201ENST00000302278 A0A1B0GWB2 263 aa3.66□□□□□ -1.82
ITGB1-201ENST00000302278 MT1HP80294 61 aa3.66□□□□□ -1.82
ITGB1-201ENST00000302278 Q8IZM0 81 aa3.66□□□□□ -1.82
ITGB1-201ENST00000302278 NAA38Q9BRA0 125 aaKnown RBP3.66□□□□□ -1.82
ITGB1-201ENST00000302278 COX8AP10176 69 aa3.66□□□□□ -1.82
ITGB1-201ENST00000302278 RPS29P62273 56 aaKnown RBP3.66□□□□□ -1.82
ITGB1-201ENST00000302278 RNASE13Q5GAN3 156 aaKnown RBP3.66□□□□□ -1.82
ITGB1-201ENST00000302278 RETNLBQ9BQ08 111 aa3.66□□□□□ -1.82
ITGB1-201ENST00000302278 ANAPC13Q9BS18 74 aa3.66□□□□□ -1.82
ITGB1-201ENST00000302278 FLGP20930 4061 aaPredicted RBP3.65□□□□□ -1.82
ITGB1-201ENST00000302278 SEC61BP60468 96 aaKnown RBP3.65□□□□□ -1.82
ITGB1-201ENST00000302278 XP32Q5T750 250 aa3.65□□□□□ -1.82
ITGB1-201ENST00000302278 AMN1Q8IY45 258 aa3.65□□□□□ -1.82
ITGB1-201ENST00000302278 A0A1W2PPM0 123 aa3.65□□□□□ -1.82
ITGB1-201ENST00000302278 F8W1H4 67 aa3.65□□□□□ -1.83
ITGB1-201ENST00000302278 SMIM27A0A1W2PRY6 76 aa3.64□□□□□ -1.83
ITGB1-201ENST00000302278 SPINK8P0C7L1 97 aa3.64□□□□□ -1.83
ITGB1-201ENST00000302278 FAM104BQ5XKR9 115 aa3.64□□□□□ -1.83
ITGB1-201ENST00000302278 AMELXQ99217 191 aa3.64□□□□□ -1.83
ITGB1-201ENST00000302278 SMIM2Q9BVW6 85 aa3.64□□□□□ -1.83
ITGB1-201ENST00000302278 NHP2Q9NX24 153 aaKnown RBP3.64□□□□□ -1.83
ITGB1-201ENST00000302278 A0A1B0GW15 77 aa3.64□□□□□ -1.83
ITGB1-201ENST00000302278 SCGB1C2P0DMR2 95 aa3.64□□□□□ -1.83
ITGB1-201ENST00000302278 LINC00310P59036 64 aa3.64□□□□□ -1.83
ITGB1-201ENST00000302278 IGLV4-3A0A075B6K6 122 aa3.63□□□□□ -1.83
ITGB1-201ENST00000302278 RPL39P62891 51 aaKnown RBP3.63□□□□□ -1.83
ITGB1-201ENST00000302278 ETDBQ3ZM63 59 aa3.63□□□□□ -1.83
ITGB1-201ENST00000302278 MRPL51Q4U2R6 128 aaKnown RBP3.63□□□□□ -1.83
ITGB1-201ENST00000302278 C2orf82Q6UX34 121 aa3.63□□□□□ -1.83
ITGB1-201ENST00000302278 LINC00167Q96N53 147 aa3.63□□□□□ -1.83
ITGB1-201ENST00000302278 GHRHP01286 108 aa3.63□□□□□ -1.83
ITGB1-201ENST00000302278 CXCL5P42830 114 aa3.63□□□□□ -1.83
ITGB1-201ENST00000302278 KRTAP10-6P60371 365 aaPredicted RBP3.63□□□□□ -1.83
ITGB1-201ENST00000302278 HIST1H4GQ99525 98 aa3.63□□□□□ -1.83
ITGB1-201ENST00000302278 LOC389332A0A1B0GUA5 103 aa3.63□□□□□ -1.83
ITGB1-201ENST00000302278 LOC107984156A0A0G2JMH3 177 aa3.62□□□□□ -1.83
ITGB1-201ENST00000302278 SMKR1H3BMG3 65 aa3.62□□□□□ -1.83
ITGB1-201ENST00000302278 SNCGO76070 127 aa3.62□□□□□ -1.83
ITGB1-201ENST00000302278 ARL17AQ8IVW1 177 aa3.62□□□□□ -1.83
ITGB1-201ENST00000302278 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.62□□□□□ -1.83
ITGB1-201ENST00000302278 KRTAP9-7A8MTY7 169 aa3.62□□□□□ -1.83
ITGB1-201ENST00000302278 F8VRH5 84 aa3.62□□□□□ -1.83
ITGB1-201ENST00000302278 HBDP02042 147 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms