RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 HAMPP81172 84 aa7.46□□□□□ -1.22
ZNF558-201ENST00000301475 KIAA0087Q14695 138 aa7.46□□□□□ -1.22
ZNF558-201ENST00000301475 LOC110117498A0A087WWA1 95 aa7.45□□□□□ -1.22
ZNF558-201ENST00000301475 A0A1W2PRX2 142 aa7.45□□□□□ -1.22
ZNF558-201ENST00000301475 FP248Q71RG6 208 aaPredicted RBP7.45□□□□□ -1.22
ZNF558-201ENST00000301475 C16orf95Q9H693 158 aa7.45□□□□□ -1.22
ZNF558-201ENST00000301475 F8WEM9 126 aa7.44□□□□□ -1.22
ZNF558-201ENST00000301475 ZNF561-AS1K7EIQ3 104 aa7.44□□□□□ -1.22
ZNF558-201ENST00000301475 BCE1O60756 84 aa7.44□□□□□ -1.22
ZNF558-201ENST00000301475 KRTAP1-3Q8IUG1 177 aa7.44□□□□□ -1.22
ZNF558-201ENST00000301475 C6orf223Q8N319 242 aa7.44□□□□□ -1.22
ZNF558-201ENST00000301475 LAMTOR3Q9UHA4 124 aa7.44□□□□□ -1.22
ZNF558-201ENST00000301475 TEP1Q99973 2627 aaKnown RBP7.43□□□□□ -1.22
ZNF558-201ENST00000301475 CSNK1G2-AS1Q8NCQ2 148 aa7.43□□□□□ -1.22
ZNF558-201ENST00000301475 PRO0628Q9UI54 55 aa7.42□□□□□ -1.22
ZNF558-201ENST00000301475 LINC00269Q8N2A0 174 aa7.42□□□□□ -1.22
ZNF558-201ENST00000301475 Q8N3U1 123 aa7.41□□□□□ -1.22
ZNF558-201ENST00000301475 TM2D3Q9BRN9 247 aa7.41□□□□□ -1.22
ZNF558-201ENST00000301475 A0A096LPF7 62 aa7.41□□□□□ -1.22
ZNF558-201ENST00000301475 DEFB130BP0DP73 79 aa7.41□□□□□ -1.22
ZNF558-201ENST00000301475 DEFB130AP0DP74 79 aa7.41□□□□□ -1.22
ZNF558-201ENST00000301475 GYPEP15421 78 aa7.41□□□□□ -1.22
ZNF558-201ENST00000301475 COX17Q14061 63 aa7.41□□□□□ -1.22
ZNF558-201ENST00000301475 Q6ZQY7 126 aa7.41□□□□□ -1.22
ZNF558-201ENST00000301475 SCXQ7RTU7 201 aa7.41□□□□□ -1.22
ZNF558-201ENST00000301475 HIVEP1P15822 2718 aa7.41□□□□□ -1.22
ZNF558-201ENST00000301475 IGLV10-54A0A075B6I4 117 aa7.41□□□□□ -1.22
ZNF558-201ENST00000301475 A0A1B0GUV1 79 aa7.41□□□□□ -1.22
ZNF558-201ENST00000301475 CCL24O00175 119 aa7.4□□□□□ -1.22
ZNF558-201ENST00000301475 C19orf73Q9NVV2 129 aa7.4□□□□□ -1.22
ZNF558-201ENST00000301475 LINC00474Q9P2X8 69 aa7.4□□□□□ -1.22
ZNF558-201ENST00000301475 TRBV7-4A0A0J9YYF1 115 aa7.4□□□□□ -1.23
ZNF558-201ENST00000301475 SMR3AQ99954 134 aa7.4□□□□□ -1.23
ZNF558-201ENST00000301475 IGHV4-28A0A0C4DH34 117 aa7.39□□□□□ -1.23
ZNF558-201ENST00000301475 CXCL6P80162 114 aa7.39□□□□□ -1.23
ZNF558-201ENST00000301475 SMIM26A0A096LP01 95 aa7.39□□□□□ -1.23
ZNF558-201ENST00000301475 C9orf66Q5T8R8 295 aa7.39□□□□□ -1.23
ZNF558-201ENST00000301475 C10orf25Q5T742 122 aa7.38□□□□□ -1.23
ZNF558-201ENST00000301475 MUC7Q8TAX7 377 aa7.38□□□□□ -1.23
ZNF558-201ENST00000301475 CD164L2Q6UWJ8 174 aa7.38□□□□□ -1.23
ZNF558-201ENST00000301475 CHCHD10Q8WYQ3 142 aaPredicted RBP7.38□□□□□ -1.23
ZNF558-201ENST00000301475 NSD1Q96L73 2696 aaPredicted RBP7.38□□□□□ -1.23
ZNF558-201ENST00000301475 ATRQ13535 2644 aa7.37□□□□□ -1.23
ZNF558-201ENST00000301475 TRBV7-6A0A0J9YX20 115 aa7.37□□□□□ -1.23
ZNF558-201ENST00000301475 LINC01006Q8NI28 216 aa7.37□□□□□ -1.23
ZNF558-201ENST00000301475 F8P00451 2351 aa7.37□□□□□ -1.23
ZNF558-201ENST00000301475 IGLV6-57P01721 117 aa7.36□□□□□ -1.23
ZNF558-201ENST00000301475 ANK3Q12955 4377 aaKnown RBP7.36□□□□□ -1.23
ZNF558-201ENST00000301475 UNQ6190/PRO20217Q6UXQ8 127 aa7.36□□□□□ -1.23
ZNF558-201ENST00000301475 C1orf43Q9BWL3 253 aa7.36□□□□□ -1.23
ZNF558-201ENST00000301475 MIFP14174 115 aa7.35□□□□□ -1.23
ZNF558-201ENST00000301475 NREPQ16612 68 aa7.35□□□□□ -1.23
ZNF558-201ENST00000301475 PDE6GP18545 87 aa7.34□□□□□ -1.23
ZNF558-201ENST00000301475 LINC00612Q8N6U2 182 aa7.34□□□□□ -1.23
ZNF558-201ENST00000301475 PKIGQ9Y2B9 76 aa7.34□□□□□ -1.23
ZNF558-201ENST00000301475 VWFP04275 2813 aa7.34□□□□□ -1.24
ZNF558-201ENST00000301475 NDUFC1O43677 76 aa7.33□□□□□ -1.24
ZNF558-201ENST00000301475 ANGP03950 147 aaKnown RBP7.33□□□□□ -1.24
ZNF558-201ENST00000301475 REG3AQ06141 175 aa7.33□□□□□ -1.24
ZNF558-201ENST00000301475 FAM229BQ4G0N7 80 aa7.33□□□□□ -1.24
ZNF558-201ENST00000301475 Q8N9L7 120 aa7.33□□□□□ -1.24
ZNF558-201ENST00000301475 TMEM254Q8TBM7 123 aa7.33□□□□□ -1.24
ZNF558-201ENST00000301475 TENM1Q9UKZ4 2725 aa7.33□□□□□ -1.24
ZNF558-201ENST00000301475 IGLV1-51P01701 117 aa7.33□□□□□ -1.24
ZNF558-201ENST00000301475 ESM1Q9NQ30 184 aa7.33□□□□□ -1.24
ZNF558-201ENST00000301475 SPAG11BQ08648 103 aa7.32□□□□□ -1.24
ZNF558-201ENST00000301475 DNAJC9-AS1A6NH13 148 aa7.32□□□□□ -1.24
ZNF558-201ENST00000301475 BPY2O14599 106 aa7.32□□□□□ -1.24
ZNF558-201ENST00000301475 PRO0255Q9UI72 69 aa7.31□□□□□ -1.24
ZNF558-201ENST00000301475 CYSRT1A8MQ03 144 aa7.31□□□□□ -1.24
ZNF558-201ENST00000301475 CMC4P56277 68 aaPredicted RBP7.31□□□□□ -1.24
ZNF558-201ENST00000301475 ATP5EP56381 51 aaPredicted RBP7.3□□□□□ -1.24
ZNF558-201ENST00000301475 KRTAP1-1Q07627 177 aa7.3□□□□□ -1.24
ZNF558-201ENST00000301475 DIRC1Q969H9 104 aa7.3□□□□□ -1.24
ZNF558-201ENST00000301475 XAGE1AQ9HD64 81 aa7.3□□□□□ -1.24
ZNF558-201ENST00000301475 A0A0J9YWU9 116 aa7.3□□□□□ -1.24
ZNF558-201ENST00000301475 IGHV4-30-4P0DP06 118 aa7.3□□□□□ -1.24
ZNF558-201ENST00000301475 BRK1Q8WUW1 75 aa7.3□□□□□ -1.24
ZNF558-201ENST00000301475 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.29□□□□□ -1.24
ZNF558-201ENST00000301475 ZNF73O43830 326 aaPredicted RBP7.28□□□□□ -1.24
ZNF558-201ENST00000301475 IGKV4-1P06312 121 aa7.28□□□□□ -1.24
ZNF558-201ENST00000301475 X6R8D5 127 aa7.28□□□□□ -1.24
ZNF558-201ENST00000301475 TRRAPQ9Y4A5 3859 aa7.28□□□□□ -1.24
ZNF558-201ENST00000301475 MPLKIPQ8TAP9 179 aa7.27□□□□□ -1.24
ZNF558-201ENST00000301475 OCR1Q9BZK8 76 aa7.27□□□□□ -1.24
ZNF558-201ENST00000301475 H3BQ85 93 aa7.27□□□□□ -1.25
ZNF558-201ENST00000301475 ELOF1P60002 83 aaKnown RBP7.27□□□□□ -1.25
ZNF558-201ENST00000301475 BAHCC1Q9P281 2608 aa7.27□□□□□ -1.25
ZNF558-201ENST00000301475 COX7BP24311 80 aa7.27□□□□□ -1.25
ZNF558-201ENST00000301475 A0A0U1RQV1 116 aa7.26□□□□□ -1.25
ZNF558-201ENST00000301475 PRYO14603 147 aa7.26□□□□□ -1.25
ZNF558-201ENST00000301475 ERC2-IT1O76042 136 aa7.26□□□□□ -1.25
ZNF558-201ENST00000301475 C6orf48Q9UBA6 75 aa7.26□□□□□ -1.25
ZNF558-201ENST00000301475 DEFB4AO15263 64 aa7.25□□□□□ -1.25
ZNF558-201ENST00000301475 MAST4O15021 2626 aa7.25□□□□□ -1.25
ZNF558-201ENST00000301475 INAFM1C9JVW0 142 aa7.24□□□□□ -1.25
ZNF558-201ENST00000301475 Q6ZTC4 211 aa7.23□□□□□ -1.25
ZNF558-201ENST00000301475 GVQW2A0A096LPI5 108 aaPredicted RBP7.23□□□□□ -1.25
ZNF558-201ENST00000301475 HIGD2AQ9BW72 106 aa7.23□□□□□ -1.25
ZNF558-201ENST00000301475 FUSP35637 526 aaKnown RBP eCLIP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms