RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 LECT2O14960 151 aa15.01□□□□□ -0.01
TPM4-201ENST00000300933 FAM19A5Q7Z5A7 132 aaPredicted RBP15.01□□□□□ -0.01
TPM4-201ENST00000300933 CRYGAP11844 174 aa15□□□□□ -0.01
TPM4-201ENST00000300933 PRB2P02812 416 aaPredicted RBP15□□□□□ -0.01
TPM4-201ENST00000300933 RPL18AQ02543 176 aaKnown RBP14.99□□□□□ -0.01
TPM4-201ENST00000300933 OR13C6PQ8NH95 151 aa14.99□□□□□ -0.01
TPM4-201ENST00000300933 REG3AQ06141 175 aa14.98□□□□□ -0.01
TPM4-201ENST00000300933 CCL18P55774 89 aa14.97□□□□□ -0.01
TPM4-201ENST00000300933 CHCHD10Q8WYQ3 142 aaPredicted RBP14.97□□□□□ -0.01
TPM4-201ENST00000300933 KLK12Q9UKR0 248 aa14.94□□□□□ -0.02
TPM4-201ENST00000300933 MGAM2Q2M2H8 2515 aa14.94□□□□□ -0.02
TPM4-201ENST00000300933 Q6ZTC4 211 aa14.94□□□□□ -0.02
TPM4-201ENST00000300933 LINC01561Q8N1V8 128 aa14.93□□□□□ -0.02
TPM4-201ENST00000300933 C9orf116Q5BN46 136 aaPredicted RBP14.92□□□□□ -0.02
TPM4-201ENST00000300933 H0YGX0 51 aa14.91□□□□□ -0.02
TPM4-201ENST00000300933 Q6JHZ5 121 aa14.91□□□□□ -0.02
TPM4-201ENST00000300933 USP17L23D6RBM5 183 aa14.89□□□□□ -0.03
TPM4-201ENST00000300933 CD164L2Q6UWJ8 174 aa14.89□□□□□ -0.03
TPM4-201ENST00000300933 SERP2Q8N6R1 65 aa14.89□□□□□ -0.03
TPM4-201ENST00000300933 LELP1Q5T871 98 aa14.89□□□□□ -0.03
TPM4-201ENST00000300933 LYPD5Q6UWN5 251 aa14.89□□□□□ -0.03
TPM4-201ENST00000300933 OBSCN-AS1Q96MR7 158 aa14.89□□□□□ -0.03
TPM4-201ENST00000300933 A0A0J9YWU9 116 aa14.88□□□□□ -0.03
TPM4-201ENST00000300933 DSCR8Q96T75 97 aa14.88□□□□□ -0.03
TPM4-201ENST00000300933 IBA57-AS1B1ANH7 110 aa14.88□□□□□ -0.03
TPM4-201ENST00000300933 PRR3P79522 188 aaKnown RBP14.88□□□□□ -0.03
TPM4-201ENST00000300933 C6orf223Q8N319 242 aa14.88□□□□□ -0.03
TPM4-201ENST00000300933 NANOS2P60321 138 aaKnown RBP14.87□□□□□ -0.03
TPM4-201ENST00000300933 EGFEM1PQ0D2K5 195 aa14.87□□□□□ -0.03
TPM4-201ENST00000300933 KPRPQ5T749 579 aaPredicted RBP14.87□□□□□ -0.03
TPM4-201ENST00000300933 KIAA0087Q14695 138 aa14.86□□□□□ -0.03
TPM4-201ENST00000300933 WFDC10BQ8IUB3 73 aa14.86□□□□□ -0.03
TPM4-201ENST00000300933 Q8IZM0 81 aa14.86□□□□□ -0.03
TPM4-201ENST00000300933 C5orf47Q569G3 176 aa14.85□□□□□ -0.03
TPM4-201ENST00000300933 DPH3Q96FX2 82 aa14.85□□□□□ -0.03
TPM4-201ENST00000300933 UPK3BQ9BT76 320 aa14.85□□□□□ -0.03
TPM4-201ENST00000300933 ORMDL1Q9P0S3 153 aa14.84□□□□□ -0.03
TPM4-201ENST00000300933 ENHOQ6UWT2 76 aa14.83□□□□□ -0.03
TPM4-201ENST00000300933 RPS28P62857 69 aaKnown RBP14.82□□□□□ -0.04
TPM4-201ENST00000300933 C10orf25Q5T742 122 aa14.82□□□□□ -0.04
TPM4-201ENST00000300933 DNAH3Q8TD57 4116 aa14.82□□□□□ -0.04
TPM4-201ENST00000300933 TMEM258P61165 79 aa14.81□□□□□ -0.04
TPM4-201ENST00000300933 MRAPQ8TCY5 172 aa14.81□□□□□ -0.04
TPM4-201ENST00000300933 OXTP01178 125 aa14.8□□□□□ -0.04
TPM4-201ENST00000300933 UNQ6190/PRO20217Q6UXQ8 127 aa14.8□□□□□ -0.04
TPM4-201ENST00000300933 TRAV23DV6A0A075B6W5 121 aa14.79□□□□□ -0.04
TPM4-201ENST00000300933 CCKP06307 115 aa14.79□□□□□ -0.04
TPM4-201ENST00000300933 FAM19A1Q7Z5A9 133 aa14.77□□□□□ -0.04
TPM4-201ENST00000300933 ESRGQ1W209 222 aa14.77□□□□□ -0.05
TPM4-201ENST00000300933 SPAG11BQ08648 103 aa14.76□□□□□ -0.05
TPM4-201ENST00000300933 PRR34Q9NV39 138 aa14.76□□□□□ -0.05
TPM4-201ENST00000300933 GHRHP01286 108 aa14.75□□□□□ -0.05
TPM4-201ENST00000300933 C11orf45Q8TAV5 145 aa14.75□□□□□ -0.05
TPM4-201ENST00000300933 DEFB131BA0A096LNP1 70 aa14.75□□□□□ -0.05
TPM4-201ENST00000300933 Q8NDZ9 215 aa14.74□□□□□ -0.05
TPM4-201ENST00000300933 C4orf26Q17RF5 130 aa14.72□□□□□ -0.05
TPM4-201ENST00000300933 Q8N814 137 aa14.71□□□□□ -0.05
TPM4-201ENST00000300933 HIGD2BQ4VC39 106 aa14.71□□□□□ -0.05
TPM4-201ENST00000300933 JMJD7-PLA2G4BH0Y9G9 81 aa14.68□□□□□ -0.06
TPM4-201ENST00000300933 C20orf197Q8N268 126 aa14.68□□□□□ -0.06
TPM4-201ENST00000300933 S100A7L2Q5SY68 101 aa14.67□□□□□ -0.06
TPM4-201ENST00000300933 COL7A1Q02388 2944 aa14.66□□□□□ -0.06
TPM4-201ENST00000300933 TMEM256-PLSCR3K7ERE1 68 aa14.66□□□□□ -0.06
TPM4-201ENST00000300933 STAB2Q8WWQ8 2551 aa14.66□□□□□ -0.06
TPM4-201ENST00000300933 HRCT1Q6UXD1 115 aa14.66□□□□□ -0.06
TPM4-201ENST00000300933 HUWE1Q7Z6Z7 4374 aaKnown RBP14.65□□□□□ -0.06
TPM4-201ENST00000300933 K7EIL1 84 aa14.64□□□□□ -0.07
TPM4-201ENST00000300933 LINC00167Q96N53 147 aa14.64□□□□□ -0.07
TPM4-201ENST00000300933 UBL5Q9BZL1 73 aa14.64□□□□□ -0.07
TPM4-201ENST00000300933 XAGE1AQ9HD64 81 aa14.64□□□□□ -0.07
TPM4-201ENST00000300933 H3BNG1 76 aa14.63□□□□□ -0.07
TPM4-201ENST00000300933 COX17Q14061 63 aa14.62□□□□□ -0.07
TPM4-201ENST00000300933 C6orf99Q4VX62 202 aa14.62□□□□□ -0.07
TPM4-201ENST00000300933 Q5XG85 94 aa14.62□□□□□ -0.07
TPM4-201ENST00000300933 C6orf48Q9UBA6 75 aa14.61□□□□□ -0.07
TPM4-201ENST00000300933 LYSTQ99698 3801 aa14.61□□□□□ -0.07
TPM4-201ENST00000300933 ATP5EP2Q5VTU8 51 aa14.6□□□□□ -0.07
TPM4-201ENST00000300933 IGKV2D-24A0A075B6R9 120 aa14.59□□□□□ -0.07
TPM4-201ENST00000300933 KRTAP26-1Q6PEX3 210 aa14.59□□□□□ -0.07
TPM4-201ENST00000300933 ZNF561-AS1K7EIQ3 104 aa14.58□□□□□ -0.08
TPM4-201ENST00000300933 M0R2N4 97 aa14.58□□□□□ -0.08
TPM4-201ENST00000300933 NDUFC2O95298 119 aa14.57□□□□□ -0.08
TPM4-201ENST00000300933 CAMK2N2Q96S95 79 aa14.56□□□□□ -0.08
TPM4-201ENST00000300933 LAMTOR3Q9UHA4 124 aa14.56□□□□□ -0.08
TPM4-201ENST00000300933 TENM2Q9NT68 2774 aa14.55□□□□□ -0.08
TPM4-201ENST00000300933 HAMPP81172 84 aa14.55□□□□□ -0.08
TPM4-201ENST00000300933 RBM3P98179 157 aaKnown RBP14.54□□□□□ -0.08
TPM4-201ENST00000300933 C15orf56Q8N910 161 aa14.54□□□□□ -0.08
TPM4-201ENST00000300933 C1orf43Q9BWL3 253 aa14.54□□□□□ -0.08
TPM4-201ENST00000300933 Q6ZRU5 148 aa14.53□□□□□ -0.08
TPM4-201ENST00000300933 FAM236DA0A1B0GTK5 79 aa14.52□□□□□ -0.09
TPM4-201ENST00000300933 FAM236CP0DP71 79 aa14.52□□□□□ -0.09
TPM4-201ENST00000300933 Q6ZQT0 140 aa14.52□□□□□ -0.09
TPM4-201ENST00000300933 TM2D3Q9BRN9 247 aa14.52□□□□□ -0.09
TPM4-201ENST00000300933 MDFIQ99750 246 aa14.51□□□□□ -0.09
TPM4-201ENST00000300933 LINC01556Q5JQF7 62 aa14.51□□□□□ -0.09
TPM4-201ENST00000300933 LINC00588Q9Y4M8 146 aa14.51□□□□□ -0.09
TPM4-201ENST00000300933 LINC00575Q6W349 94 aa14.5□□□□□ -0.09
TPM4-201ENST00000300933 TRBV10-3A0A0K0K1G6 114 aa14.49□□□□□ -0.09
TPM4-201ENST00000300933 NDUFC2-KCTD14E9PQ53 114 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms