RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 C4orf3Q8WVX3 66 aa7.54□□□□□ -1.2
SNX20-201ENST00000300590 MIFP14174 115 aa7.54□□□□□ -1.2
SNX20-201ENST00000300590 Q8IZM0 81 aa7.54□□□□□ -1.2
SNX20-201ENST00000300590 GIG44P09565 113 aaPredicted RBP7.53□□□□□ -1.2
SNX20-201ENST00000300590 C6orf223Q8N319 242 aa7.53□□□□□ -1.2
SNX20-201ENST00000300590 C16orf74Q96GX8 76 aa7.53□□□□□ -1.2
SNX20-201ENST00000300590 KLKP1Q107X0 134 aa7.53□□□□□ -1.2
SNX20-201ENST00000300590 ZNF561-AS1K7EIQ3 104 aa7.53□□□□□ -1.2
SNX20-201ENST00000300590 ANGP03950 147 aaKnown RBP7.52□□□□□ -1.21
SNX20-201ENST00000300590 PRB2P02812 416 aaPredicted RBP7.52□□□□□ -1.21
SNX20-201ENST00000300590 C10orf25Q5T742 122 aa7.52□□□□□ -1.21
SNX20-201ENST00000300590 UNQ6190/PRO20217Q6UXQ8 127 aa7.52□□□□□ -1.21
SNX20-201ENST00000300590 LINC01006Q8NI28 216 aa7.52□□□□□ -1.21
SNX20-201ENST00000300590 ACANP16112 2415 aa7.51□□□□□ -1.21
SNX20-201ENST00000300590 CCL24O00175 119 aa7.51□□□□□ -1.21
SNX20-201ENST00000300590 XAGE1AQ9HD64 81 aa7.51□□□□□ -1.21
SNX20-201ENST00000300590 FAM229BQ4G0N7 80 aa7.5□□□□□ -1.21
SNX20-201ENST00000300590 CHCHD10Q8WYQ3 142 aaPredicted RBP7.5□□□□□ -1.21
SNX20-201ENST00000300590 HIVEP2P31629 2446 aa7.5□□□□□ -1.21
SNX20-201ENST00000300590 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.5□□□□□ -1.21
SNX20-201ENST00000300590 MUC7Q8TAX7 377 aa7.5□□□□□ -1.21
SNX20-201ENST00000300590 RETNQ9HD89 108 aa7.5□□□□□ -1.21
SNX20-201ENST00000300590 KIAA0087Q14695 138 aa7.49□□□□□ -1.21
SNX20-201ENST00000300590 NREPQ16612 68 aa7.49□□□□□ -1.21
SNX20-201ENST00000300590 DEFB4AO15263 64 aa7.49□□□□□ -1.21
SNX20-201ENST00000300590 PMAIP1Q13794 54 aa7.49□□□□□ -1.21
SNX20-201ENST00000300590 BBC3Q96PG8 261 aaPredicted RBP7.49□□□□□ -1.21
SNX20-201ENST00000300590 NDUFC1O43677 76 aa7.49□□□□□ -1.21
SNX20-201ENST00000300590 EPM2AB3EWF7 344 aa7.48□□□□□ -1.21
SNX20-201ENST00000300590 TMEM254Q8TBM7 123 aa7.48□□□□□ -1.21
SNX20-201ENST00000300590 BPY2O14599 106 aa7.48□□□□□ -1.21
SNX20-201ENST00000300590 FUSP35637 526 aaKnown RBP eCLIP7.48□□□□□ -1.21
SNX20-201ENST00000300590 LOC110117498A0A087WWA1 95 aa7.47□□□□□ -1.21
SNX20-201ENST00000300590 REG3AQ06141 175 aa7.46□□□□□ -1.22
SNX20-201ENST00000300590 CD164L2Q6UWJ8 174 aa7.46□□□□□ -1.22
SNX20-201ENST00000300590 SPAG11BQ08648 103 aa7.45□□□□□ -1.22
SNX20-201ENST00000300590 ESRGQ1W209 222 aa7.45□□□□□ -1.22
SNX20-201ENST00000300590 ATP5EP56381 51 aaPredicted RBP7.45□□□□□ -1.22
SNX20-201ENST00000300590 CXCL6P80162 114 aa7.45□□□□□ -1.22
SNX20-201ENST00000300590 TRBV7-4A0A0J9YYF1 115 aa7.45□□□□□ -1.22
SNX20-201ENST00000300590 PSPHP1O15172 72 aa7.45□□□□□ -1.22
SNX20-201ENST00000300590 CYSRT1A8MQ03 144 aa7.44□□□□□ -1.22
SNX20-201ENST00000300590 COX17Q14061 63 aa7.44□□□□□ -1.22
SNX20-201ENST00000300590 C3orf84H3BNL1 204 aa7.44□□□□□ -1.22
SNX20-201ENST00000300590 IGHV4-31P0DP07 118 aa7.44□□□□□ -1.22
SNX20-201ENST00000300590 A0A1B0GUV1 79 aa7.43□□□□□ -1.22
SNX20-201ENST00000300590 BCE1O60756 84 aa7.43□□□□□ -1.22
SNX20-201ENST00000300590 HTN3P15516 51 aa7.43□□□□□ -1.22
SNX20-201ENST00000300590 HIGD2AQ9BW72 106 aa7.43□□□□□ -1.22
SNX20-201ENST00000300590 CSNK1G2-AS1Q8NCQ2 148 aa7.43□□□□□ -1.22
SNX20-201ENST00000300590 DIRC1Q969H9 104 aa7.43□□□□□ -1.22
SNX20-201ENST00000300590 CELA1Q9UNI1 258 aa7.43□□□□□ -1.22
SNX20-201ENST00000300590 IGHV4-28A0A0C4DH34 117 aa7.42□□□□□ -1.22
SNX20-201ENST00000300590 DSCR9P59020 149 aa7.42□□□□□ -1.22
SNX20-201ENST00000300590 F8P00451 2351 aa7.42□□□□□ -1.22
SNX20-201ENST00000300590 PRYO14603 147 aa7.42□□□□□ -1.22
SNX20-201ENST00000300590 PRR4Q16378 134 aa7.42□□□□□ -1.22
SNX20-201ENST00000300590 DEFB105AQ8NG35 78 aa7.42□□□□□ -1.22
SNX20-201ENST00000300590 PDE6GP18545 87 aa7.41□□□□□ -1.22
SNX20-201ENST00000300590 ZNF462Q96JM2 2506 aa7.41□□□□□ -1.22
SNX20-201ENST00000300590 PRO0255Q9UI72 69 aa7.41□□□□□ -1.22
SNX20-201ENST00000300590 COX7BP24311 80 aa7.4□□□□□ -1.22
SNX20-201ENST00000300590 KLK12Q9UKR0 248 aa7.4□□□□□ -1.22
SNX20-201ENST00000300590 ZNF73O43830 326 aaPredicted RBP7.4□□□□□ -1.22
SNX20-201ENST00000300590 FLNAP21333 2647 aaKnown RBP7.4□□□□□ -1.22
SNX20-201ENST00000300590 IGSF10Q6WRI0 2623 aa7.39□□□□□ -1.23
SNX20-201ENST00000300590 IGLV6-57P01721 117 aa7.39□□□□□ -1.23
SNX20-201ENST00000300590 FAM30AQ9NZY2 134 aa7.39□□□□□ -1.23
SNX20-201ENST00000300590 C9orf66Q5T8R8 295 aa7.39□□□□□ -1.23
SNX20-201ENST00000300590 KRTAP10-9P60411 292 aa7.39□□□□□ -1.23
SNX20-201ENST00000300590 C19orf73Q9NVV2 129 aa7.39□□□□□ -1.23
SNX20-201ENST00000300590 FSHBP01225 129 aa7.38□□□□□ -1.23
SNX20-201ENST00000300590 HIGD2BQ4VC39 106 aa7.38□□□□□ -1.23
SNX20-201ENST00000300590 ITPR3Q14573 2671 aa7.38□□□□□ -1.23
SNX20-201ENST00000300590 UNC79Q9P2D8 2635 aa7.37□□□□□ -1.23
SNX20-201ENST00000300590 ZNF469Q96JG9 3925 aaPredicted RBP7.37□□□□□ -1.23
SNX20-201ENST00000300590 DNAJC9-AS1A6NH13 148 aa7.36□□□□□ -1.23
SNX20-201ENST00000300590 IGKV4-1P06312 121 aa7.36□□□□□ -1.23
SNX20-201ENST00000300590 MRPL55Q7Z7F7 128 aaKnown RBP7.35□□□□□ -1.23
SNX20-201ENST00000300590 C6orf48Q9UBA6 75 aa7.35□□□□□ -1.23
SNX20-201ENST00000300590 IGLV1-51P01701 117 aa7.34□□□□□ -1.23
SNX20-201ENST00000300590 CMC4P56277 68 aaPredicted RBP7.34□□□□□ -1.23
SNX20-201ENST00000300590 SPTSSBQ8NFR3 76 aa7.34□□□□□ -1.23
SNX20-201ENST00000300590 OCR1Q9BZK8 76 aa7.34□□□□□ -1.24
SNX20-201ENST00000300590 DEFB135Q30KP9 77 aa7.33□□□□□ -1.24
SNX20-201ENST00000300590 SMIM29Q86T20 159 aa7.33□□□□□ -1.24
SNX20-201ENST00000300590 Q6ZTC4 211 aa7.32□□□□□ -1.24
SNX20-201ENST00000300590 ELOF1P60002 83 aaKnown RBP7.32□□□□□ -1.24
SNX20-201ENST00000300590 CAMK2N2Q96S95 79 aa7.31□□□□□ -1.24
SNX20-201ENST00000300590 VWFP04275 2813 aa7.31□□□□□ -1.24
SNX20-201ENST00000300590 A0A0J9YWU9 116 aa7.31□□□□□ -1.24
SNX20-201ENST00000300590 IGHV4-30-4P0DP06 118 aa7.31□□□□□ -1.24
SNX20-201ENST00000300590 LINC00612Q8N6U2 182 aa7.31□□□□□ -1.24
SNX20-201ENST00000300590 X6R8D5 127 aa7.31□□□□□ -1.24
SNX20-201ENST00000300590 PRR15Q8IV56 129 aa7.3□□□□□ -1.24
SNX20-201ENST00000300590 H3BQ85 93 aa7.29□□□□□ -1.24
SNX20-201ENST00000300590 C1orf64Q8NEQ6 169 aa7.28□□□□□ -1.24
SNX20-201ENST00000300590 A8MUN3 132 aa7.27□□□□□ -1.24
SNX20-201ENST00000300590 ERC2-IT1O76042 136 aa7.27□□□□□ -1.24
SNX20-201ENST00000300590 CD164Q04900 197 aa7.27□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms