RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 FAM19A1Q7Z5A9 133 aa13.04□□□□□ -0.32
TRA2A-201ENST00000297071 CLPSL2Q6UWE3 100 aa13.04□□□□□ -0.32
TRA2A-201ENST00000297071 CXCL6P80162 114 aa13.02□□□□□ -0.32
TRA2A-201ENST00000297071 TRAV23DV6A0A075B6W5 121 aa13.02□□□□□ -0.33
TRA2A-201ENST00000297071 LINC00482Q8N8I6 264 aa13.02□□□□□ -0.33
TRA2A-201ENST00000297071 Q8NDZ9 215 aa13.02□□□□□ -0.33
TRA2A-201ENST00000297071 ANGP03950 147 aaKnown RBP13.01□□□□□ -0.33
TRA2A-201ENST00000297071 TRBV7-6A0A0J9YX20 115 aa13□□□□□ -0.33
TRA2A-201ENST00000297071 KRTAP1-1Q07627 177 aa12.99□□□□□ -0.33
TRA2A-201ENST00000297071 SPAG11BQ08648 103 aa12.99□□□□□ -0.33
TRA2A-201ENST00000297071 WFDC11Q8NEX6 87 aa12.99□□□□□ -0.33
TRA2A-201ENST00000297071 DSCR8Q96T75 97 aa12.99□□□□□ -0.33
TRA2A-201ENST00000297071 WIPF1O43516 503 aa12.98□□□□□ -0.33
TRA2A-201ENST00000297071 LINC01547P58512 204 aaPredicted RBP12.98□□□□□ -0.33
TRA2A-201ENST00000297071 C9orf116Q5BN46 136 aaPredicted RBP12.98□□□□□ -0.33
TRA2A-201ENST00000297071 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.98□□□□□ -0.33
TRA2A-201ENST00000297071 TLN2Q9Y4G6 2542 aa12.98□□□□□ -0.33
TRA2A-201ENST00000297071 EPM2AB3EWF7 344 aa12.97□□□□□ -0.33
TRA2A-201ENST00000297071 LAMTOR3Q9UHA4 124 aa12.97□□□□□ -0.33
TRA2A-201ENST00000297071 LELP1Q5T871 98 aa12.97□□□□□ -0.33
TRA2A-201ENST00000297071 Q6ZVQ6 151 aa12.97□□□□□ -0.33
TRA2A-201ENST00000297071 PRR34Q9NV39 138 aa12.97□□□□□ -0.33
TRA2A-201ENST00000297071 PDZD2O15018 2839 aa12.96□□□□□ -0.33
TRA2A-201ENST00000297071 OXTP01178 125 aa12.96□□□□□ -0.33
TRA2A-201ENST00000297071 WFDC9Q8NEX5 89 aa12.96□□□□□ -0.33
TRA2A-201ENST00000297071 HIVEP1P15822 2718 aa12.96□□□□□ -0.34
TRA2A-201ENST00000297071 KLKP1Q107X0 134 aa12.95□□□□□ -0.34
TRA2A-201ENST00000297071 UNQ6190/PRO20217Q6UXQ8 127 aa12.95□□□□□ -0.34
TRA2A-201ENST00000297071 A0A096LPF7 62 aa12.94□□□□□ -0.34
TRA2A-201ENST00000297071 DIRC1Q969H9 104 aa12.94□□□□□ -0.34
TRA2A-201ENST00000297071 TRBV7-4A0A0J9YYF1 115 aa12.93□□□□□ -0.34
TRA2A-201ENST00000297071 C10orf25Q5T742 122 aa12.93□□□□□ -0.34
TRA2A-201ENST00000297071 IGLV10-54A0A075B6I4 117 aa12.92□□□□□ -0.34
TRA2A-201ENST00000297071 FAM236DA0A1B0GTK5 79 aa12.92□□□□□ -0.34
TRA2A-201ENST00000297071 FAM236CP0DP71 79 aa12.92□□□□□ -0.34
TRA2A-201ENST00000297071 C20orf197Q8N268 126 aa12.92□□□□□ -0.34
TRA2A-201ENST00000297071 Q6ZQY7 126 aa12.92□□□□□ -0.34
TRA2A-201ENST00000297071 DAD1P61803 113 aa12.91□□□□□ -0.34
TRA2A-201ENST00000297071 SERP1Q9Y6X1 66 aa12.9□□□□□ -0.34
TRA2A-201ENST00000297071 H7BZZ5 65 aa12.9□□□□□ -0.34
TRA2A-201ENST00000297071 APOC4P55056 127 aa12.9□□□□□ -0.34
TRA2A-201ENST00000297071 Q5XG85 94 aa12.89□□□□□ -0.35
TRA2A-201ENST00000297071 CSMD2Q7Z408 3487 aa12.89□□□□□ -0.35
TRA2A-201ENST00000297071 JMJD1CQ15652 2540 aa12.88□□□□□ -0.35
TRA2A-201ENST00000297071 MIFP14174 115 aa12.88□□□□□ -0.35
TRA2A-201ENST00000297071 ELOF1P60002 83 aaKnown RBP12.88□□□□□ -0.35
TRA2A-201ENST00000297071 SPATA3Q8NHX4 192 aa12.88□□□□□ -0.35
TRA2A-201ENST00000297071 NDUFC1O43677 76 aa12.88□□□□□ -0.35
TRA2A-201ENST00000297071 COX7BP24311 80 aa12.88□□□□□ -0.35
TRA2A-201ENST00000297071 MTORP42345 2549 aa12.87□□□□□ -0.35
TRA2A-201ENST00000297071 M0R2N4 97 aa12.87□□□□□ -0.35
TRA2A-201ENST00000297071 Q8N3U1 123 aa12.87□□□□□ -0.35
TRA2A-201ENST00000297071 HAMPP81172 84 aa12.86□□□□□ -0.35
TRA2A-201ENST00000297071 ZNF73O43830 326 aaPredicted RBP12.85□□□□□ -0.35
TRA2A-201ENST00000297071 C6orf48Q9UBA6 75 aa12.85□□□□□ -0.35
TRA2A-201ENST00000297071 ERC2-IT1O76042 136 aa12.84□□□□□ -0.35
TRA2A-201ENST00000297071 ATP5EP56381 51 aaPredicted RBP12.83□□□□□ -0.35
TRA2A-201ENST00000297071 Q8NAQ8 132 aa12.83□□□□□ -0.35
TRA2A-201ENST00000297071 APCP25054 2843 aa12.83□□□□□ -0.36
TRA2A-201ENST00000297071 KRTAP10-3P60369 221 aa12.83□□□□□ -0.36
TRA2A-201ENST00000297071 SPART-AS1P0CW21 52 aa12.82□□□□□ -0.36
TRA2A-201ENST00000297071 TRAV10A0A0B4J240 114 aa12.81□□□□□ -0.36
TRA2A-201ENST00000297071 F8WDY8 70 aa12.81□□□□□ -0.36
TRA2A-201ENST00000297071 M0R378 163 aa12.81□□□□□ -0.36
TRA2A-201ENST00000297071 VPREB1P12018 145 aa12.81□□□□□ -0.36
TRA2A-201ENST00000297071 EGFEM1PQ0D2K5 195 aa12.8□□□□□ -0.36
TRA2A-201ENST00000297071 DEFB135Q30KP9 77 aa12.8□□□□□ -0.36
TRA2A-201ENST00000297071 KLK12Q9UKR0 248 aa12.8□□□□□ -0.36
TRA2A-201ENST00000297071 CELA1Q9UNI1 258 aa12.8□□□□□ -0.36
TRA2A-201ENST00000297071 C4orf26Q17RF5 130 aa12.77□□□□□ -0.37
TRA2A-201ENST00000297071 LINC00528Q8N1L1 170 aa12.77□□□□□ -0.37
TRA2A-201ENST00000297071 SONP18583 2426 aaKnown RBP12.77□□□□□ -0.37
TRA2A-201ENST00000297071 ANK3Q12955 4377 aaKnown RBP12.76□□□□□ -0.37
TRA2A-201ENST00000297071 H3BNG1 76 aa12.76□□□□□ -0.37
TRA2A-201ENST00000297071 NIPBLQ6KC79 2804 aaeCLIP12.74□□□□□ -0.37
TRA2A-201ENST00000297071 A0A1B0GW54 56 aa12.74□□□□□ -0.37
TRA2A-201ENST00000297071 ZNF469Q96JG9 3925 aaPredicted RBP12.73□□□□□ -0.37
TRA2A-201ENST00000297071 DEFB4AO15263 64 aa12.73□□□□□ -0.37
TRA2A-201ENST00000297071 KRTAP26-1Q6PEX3 210 aa12.73□□□□□ -0.37
TRA2A-201ENST00000297071 SMIM26A0A096LP01 95 aa12.72□□□□□ -0.37
TRA2A-201ENST00000297071 XAGE1AQ9HD64 81 aa12.72□□□□□ -0.37
TRA2A-201ENST00000297071 CAMK2N2Q96S95 79 aa12.72□□□□□ -0.37
TRA2A-201ENST00000297071 FLNAP21333 2647 aaKnown RBP12.7□□□□□ -0.38
TRA2A-201ENST00000297071 F8WEM9 126 aa12.7□□□□□ -0.38
TRA2A-201ENST00000297071 NREPQ16612 68 aa12.7□□□□□ -0.38
TRA2A-201ENST00000297071 HRCT1Q6UXD1 115 aa12.7□□□□□ -0.38
TRA2A-201ENST00000297071 RMI2Q96E14 147 aa12.7□□□□□ -0.38
TRA2A-201ENST00000297071 FN1P02751 2386 aaKnown RBP12.7□□□□□ -0.38
TRA2A-201ENST00000297071 MRAPQ8TCY5 172 aa12.69□□□□□ -0.38
TRA2A-201ENST00000297071 TM2D3Q9BRN9 247 aa12.68□□□□□ -0.38
TRA2A-201ENST00000297071 BPY2O14599 106 aa12.67□□□□□ -0.38
TRA2A-201ENST00000297071 SNURFQ9Y675 71 aa12.67□□□□□ -0.38
TRA2A-201ENST00000297071 MDFIQ99750 246 aa12.66□□□□□ -0.38
TRA2A-201ENST00000297071 IGKV4-1P06312 121 aa12.65□□□□□ -0.38
TRA2A-201ENST00000297071 HTN3P15516 51 aa12.65□□□□□ -0.39
TRA2A-201ENST00000297071 Q6ZRU5 148 aa12.65□□□□□ -0.39
TRA2A-201ENST00000297071 TMEM254Q8TBM7 123 aa12.65□□□□□ -0.39
TRA2A-201ENST00000297071 C15orf56Q8N910 161 aa12.64□□□□□ -0.39
TRA2A-201ENST00000297071 KCNQ1DNQ9H478 68 aa12.64□□□□□ -0.39
TRA2A-201ENST00000297071 CCDC168Q8NDH2 2452 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms