RNA–Protein interactions for RNA: ENST00000295886.4

NKX6-1-201, Transcript of NK6 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX6-1, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1-201ENST00000295886 LINC01561Q8N1V8 128 aa13.28□□□□□ -0.28
NKX6-1-201ENST00000295886 KLK12Q9UKR0 248 aa13.28□□□□□ -0.28
NKX6-1-201ENST00000295886 APOC4P55056 127 aa13.27□□□□□ -0.28
NKX6-1-201ENST00000295886 KMT2BQ9UMN6 2715 aaPredicted RBP13.27□□□□□ -0.28
NKX6-1-201ENST00000295886 SERP2Q8N6R1 65 aa13.27□□□□□ -0.29
NKX6-1-201ENST00000295886 PKD1L1Q8TDX9 2849 aa13.26□□□□□ -0.29
NKX6-1-201ENST00000295886 SPAG11BQ08648 103 aa13.26□□□□□ -0.29
NKX6-1-201ENST00000295886 COX17Q14061 63 aa13.26□□□□□ -0.29
NKX6-1-201ENST00000295886 USP17L23D6RBM5 183 aa13.26□□□□□ -0.29
NKX6-1-201ENST00000295886 S100A7L2Q5SY68 101 aa13.25□□□□□ -0.29
NKX6-1-201ENST00000295886 NDUFC2O95298 119 aa13.25□□□□□ -0.29
NKX6-1-201ENST00000295886 CYSRT1A8MQ03 144 aa13.24□□□□□ -0.29
NKX6-1-201ENST00000295886 RPS28P62857 69 aaKnown RBP13.22□□□□□ -0.29
NKX6-1-201ENST00000295886 SPART-AS1P0CW21 52 aa13.22□□□□□ -0.29
NKX6-1-201ENST00000295886 LINC00167Q96N53 147 aa13.22□□□□□ -0.29
NKX6-1-201ENST00000295886 UPK3BQ9BT76 320 aa13.22□□□□□ -0.29
NKX6-1-201ENST00000295886 TMEM258P61165 79 aa13.21□□□□□ -0.3
NKX6-1-201ENST00000295886 CCKP06307 115 aa13.2□□□□□ -0.3
NKX6-1-201ENST00000295886 IGHV4-30-4P0DP06 118 aa13.2□□□□□ -0.3
NKX6-1-201ENST00000295886 LELP1Q5T871 98 aa13.2□□□□□ -0.3
NKX6-1-201ENST00000295886 MIFP14174 115 aa13.2□□□□□ -0.3
NKX6-1-201ENST00000295886 ENHOQ6UWT2 76 aa13.2□□□□□ -0.3
NKX6-1-201ENST00000295886 C5orf47Q569G3 176 aa13.19□□□□□ -0.3
NKX6-1-201ENST00000295886 DPH3Q96FX2 82 aa13.19□□□□□ -0.3
NKX6-1-201ENST00000295886 XAGE1AQ9HD64 81 aa13.19□□□□□ -0.3
NKX6-1-201ENST00000295886 WFDC9Q8NEX5 89 aa13.19□□□□□ -0.3
NKX6-1-201ENST00000295886 TMEM256-PLSCR3K7ERE1 68 aa13.18□□□□□ -0.3
NKX6-1-201ENST00000295886 DSCR8Q96T75 97 aa13.18□□□□□ -0.3
NKX6-1-201ENST00000295886 LINC00575Q6W349 94 aa13.16□□□□□ -0.3
NKX6-1-201ENST00000295886 RETNQ9HD89 108 aa13.15□□□□□ -0.3
NKX6-1-201ENST00000295886 JMJD7-PLA2G4BH0Y9G9 81 aa13.15□□□□□ -0.3
NKX6-1-201ENST00000295886 PRR34Q9NV39 138 aa13.15□□□□□ -0.3
NKX6-1-201ENST00000295886 HIGD2BQ4VC39 106 aa13.14□□□□□ -0.31
NKX6-1-201ENST00000295886 LYPD5Q6UWN5 251 aa13.13□□□□□ -0.31
NKX6-1-201ENST00000295886 C6orf48Q9UBA6 75 aa13.13□□□□□ -0.31
NKX6-1-201ENST00000295886 TRAV23DV6A0A075B6W5 121 aa13.13□□□□□ -0.31
NKX6-1-201ENST00000295886 A0A0J9YWU9 116 aa13.12□□□□□ -0.31
NKX6-1-201ENST00000295886 WFDC10BQ8IUB3 73 aa13.12□□□□□ -0.31
NKX6-1-201ENST00000295886 GHRHP01286 108 aa13.12□□□□□ -0.31
NKX6-1-201ENST00000295886 OXTP01178 125 aa13.11□□□□□ -0.31
NKX6-1-201ENST00000295886 FAM19A1Q7Z5A9 133 aa13.11□□□□□ -0.31
NKX6-1-201ENST00000295886 TRBV10-3A0A0K0K1G6 114 aa13.11□□□□□ -0.31
NKX6-1-201ENST00000295886 M0R2N4 97 aa13.1□□□□□ -0.31
NKX6-1-201ENST00000295886 LAMTOR3Q9UHA4 124 aa13.1□□□□□ -0.31
NKX6-1-201ENST00000295886 IGLV6-57P01721 117 aa13.09□□□□□ -0.31
NKX6-1-201ENST00000295886 Q6ZQY7 126 aa13.09□□□□□ -0.31
NKX6-1-201ENST00000295886 TENM3Q9P273 2699 aa13.09□□□□□ -0.31
NKX6-1-201ENST00000295886 OXLD1Q5BKU9 147 aa13.09□□□□□ -0.31
NKX6-1-201ENST00000295886 ATP5EP2Q5VTU8 51 aa13.08□□□□□ -0.32
NKX6-1-201ENST00000295886 ANK2Q01484 3957 aa13.07□□□□□ -0.32
NKX6-1-201ENST00000295886 RBM3P98179 157 aaKnown RBP13.06□□□□□ -0.32
NKX6-1-201ENST00000295886 KPRPQ5T749 579 aaPredicted RBP13.05□□□□□ -0.32
NKX6-1-201ENST00000295886 UBL5Q9BZL1 73 aa13.05□□□□□ -0.32
NKX6-1-201ENST00000295886 Q6ZTC4 211 aa13.04□□□□□ -0.32
NKX6-1-201ENST00000295886 Q6ZQT0 140 aa13.04□□□□□ -0.32
NKX6-1-201ENST00000295886 ZNF561-AS1K7EIQ3 104 aa13.03□□□□□ -0.32
NKX6-1-201ENST00000295886 CAMK2N2Q96S95 79 aa13.03□□□□□ -0.32
NKX6-1-201ENST00000295886 C4orf26Q17RF5 130 aa13.02□□□□□ -0.32
NKX6-1-201ENST00000295886 C20orf197Q8N268 126 aa13.02□□□□□ -0.32
NKX6-1-201ENST00000295886 GVQW2A0A096LPI5 108 aaPredicted RBP13.01□□□□□ -0.33
NKX6-1-201ENST00000295886 DIRC1Q969H9 104 aa13.01□□□□□ -0.33
NKX6-1-201ENST00000295886 Q6ZRU5 148 aa13□□□□□ -0.33
NKX6-1-201ENST00000295886 ZNF73O43830 326 aaPredicted RBP12.99□□□□□ -0.33
NKX6-1-201ENST00000295886 KRTAP10-11P60412 298 aa12.99□□□□□ -0.33
NKX6-1-201ENST00000295886 MUC7Q8TAX7 377 aa12.98□□□□□ -0.33
NKX6-1-201ENST00000295886 STAB1Q9NY15 2570 aa12.98□□□□□ -0.33
NKX6-1-201ENST00000295886 KRTAP26-1Q6PEX3 210 aa12.97□□□□□ -0.33
NKX6-1-201ENST00000295886 Q5XG85 94 aa12.97□□□□□ -0.33
NKX6-1-201ENST00000295886 ESRGQ1W209 222 aa12.96□□□□□ -0.33
NKX6-1-201ENST00000295886 HRCT1Q6UXD1 115 aa12.96□□□□□ -0.33
NKX6-1-201ENST00000295886 C15orf56Q8N910 161 aa12.96□□□□□ -0.33
NKX6-1-201ENST00000295886 VPREB1P12018 145 aa12.96□□□□□ -0.33
NKX6-1-201ENST00000295886 NDUFC2-KCTD14E9PQ53 114 aa12.95□□□□□ -0.34
NKX6-1-201ENST00000295886 HAMPP81172 84 aa12.95□□□□□ -0.34
NKX6-1-201ENST00000295886 COX7BP24311 80 aa12.95□□□□□ -0.34
NKX6-1-201ENST00000295886 LOC110117498A0A087WWA1 95 aa12.94□□□□□ -0.34
NKX6-1-201ENST00000295886 FLNBO75369 2602 aaKnown RBP12.94□□□□□ -0.34
NKX6-1-201ENST00000295886 WIPF1O43516 503 aa12.93□□□□□ -0.34
NKX6-1-201ENST00000295886 FBN1P35555 2871 aaKnown RBP12.92□□□□□ -0.34
NKX6-1-201ENST00000295886 NOTCH1P46531 2555 aa12.92□□□□□ -0.34
NKX6-1-201ENST00000295886 Q6ZVQ6 151 aa12.92□□□□□ -0.34
NKX6-1-201ENST00000295886 F8P00451 2351 aa12.92□□□□□ -0.34
NKX6-1-201ENST00000295886 IGKV2D-24A0A075B6R9 120 aa12.92□□□□□ -0.34
NKX6-1-201ENST00000295886 FAM236DA0A1B0GTK5 79 aa12.92□□□□□ -0.34
NKX6-1-201ENST00000295886 FAM236CP0DP71 79 aa12.92□□□□□ -0.34
NKX6-1-201ENST00000295886 ELOF1P60002 83 aaKnown RBP12.92□□□□□ -0.34
NKX6-1-201ENST00000295886 LINC01547P58512 204 aaPredicted RBP12.91□□□□□ -0.34
NKX6-1-201ENST00000295886 MAST4O15021 2626 aa12.91□□□□□ -0.34
NKX6-1-201ENST00000295886 Q6ZRP5 223 aa12.91□□□□□ -0.34
NKX6-1-201ENST00000295886 EGFEM1PQ0D2K5 195 aa12.9□□□□□ -0.34
NKX6-1-201ENST00000295886 SCXQ7RTU7 201 aa12.9□□□□□ -0.35
NKX6-1-201ENST00000295886 C1orf43Q9BWL3 253 aa12.89□□□□□ -0.35
NKX6-1-201ENST00000295886 TRAV7A0A075B6U4 112 aa12.88□□□□□ -0.35
NKX6-1-201ENST00000295886 M0R378 163 aa12.87□□□□□ -0.35
NKX6-1-201ENST00000295886 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.87□□□□□ -0.35
NKX6-1-201ENST00000295886 TRAV10A0A0B4J240 114 aa12.87□□□□□ -0.35
NKX6-1-201ENST00000295886 H7BZZ5 65 aa12.87□□□□□ -0.35
NKX6-1-201ENST00000295886 H3BNG1 76 aa12.85□□□□□ -0.35
NKX6-1-201ENST00000295886 DEFB131BA0A096LNP1 70 aa12.85□□□□□ -0.35
NKX6-1-201ENST00000295886 SNURFQ9Y675 71 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms