RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 SNURFQ9Y675 71 aa10.05□□□□□ -0.8
CCNF-201ENST00000293968 ZNF561-AS1K7EIQ3 104 aa10.04□□□□□ -0.8
CCNF-201ENST00000293968 AKAP9Q99996 3911 aa10.04□□□□□ -0.8
CCNF-201ENST00000293968 X6R8D5 127 aa10.04□□□□□ -0.8
CCNF-201ENST00000293968 HRCT1Q6UXD1 115 aa10.03□□□□□ -0.8
CCNF-201ENST00000293968 SPATA3Q8NHX4 192 aa10.02□□□□□ -0.8
CCNF-201ENST00000293968 LINC00167Q96N53 147 aa10.02□□□□□ -0.8
CCNF-201ENST00000293968 TRBV10-3A0A0K0K1G6 114 aa10.02□□□□□ -0.81
CCNF-201ENST00000293968 C4orf26Q17RF5 130 aa10.02□□□□□ -0.81
CCNF-201ENST00000293968 RPS28P62857 69 aaKnown RBP10.02□□□□□ -0.81
CCNF-201ENST00000293968 Q6ZQT0 140 aa10.01□□□□□ -0.81
CCNF-201ENST00000293968 LINC01547P58512 204 aaPredicted RBP10.01□□□□□ -0.81
CCNF-201ENST00000293968 HIGD2BQ4VC39 106 aa10.01□□□□□ -0.81
CCNF-201ENST00000293968 IGHV4-28A0A0C4DH34 117 aa10.01□□□□□ -0.81
CCNF-201ENST00000293968 Q6ZVQ6 151 aa10□□□□□ -0.81
CCNF-201ENST00000293968 DIRC1Q969H9 104 aa10□□□□□ -0.81
CCNF-201ENST00000293968 OXTP01178 125 aa10□□□□□ -0.81
CCNF-201ENST00000293968 ZNF469Q96JG9 3925 aaPredicted RBP9.99□□□□□ -0.81
CCNF-201ENST00000293968 FAM236DA0A1B0GTK5 79 aa9.99□□□□□ -0.81
CCNF-201ENST00000293968 FAM236CP0DP71 79 aa9.99□□□□□ -0.81
CCNF-201ENST00000293968 TRAV10A0A0B4J240 114 aa9.99□□□□□ -0.81
CCNF-201ENST00000293968 NBPF19A0A087WUL8 3843 aa9.99□□□□□ -0.81
CCNF-201ENST00000293968 SMR3AQ99954 134 aa9.98□□□□□ -0.81
CCNF-201ENST00000293968 CELA1Q9UNI1 258 aa9.98□□□□□ -0.81
CCNF-201ENST00000293968 LYRM9A8MSI8 78 aa9.98□□□□□ -0.81
CCNF-201ENST00000293968 C16orf95Q9H693 158 aa9.96□□□□□ -0.81
CCNF-201ENST00000293968 COX7BP24311 80 aa9.96□□□□□ -0.82
CCNF-201ENST00000293968 RMI2Q96E14 147 aa9.96□□□□□ -0.82
CCNF-201ENST00000293968 LINC00612Q8N6U2 182 aa9.95□□□□□ -0.82
CCNF-201ENST00000293968 CAMK2N2Q96S95 79 aa9.95□□□□□ -0.82
CCNF-201ENST00000293968 ZNF73O43830 326 aaPredicted RBP9.95□□□□□ -0.82
CCNF-201ENST00000293968 TRAV7A0A075B6U4 112 aa9.94□□□□□ -0.82
CCNF-201ENST00000293968 DEFB105AQ8NG35 78 aa9.94□□□□□ -0.82
CCNF-201ENST00000293968 MUC7Q8TAX7 377 aa9.94□□□□□ -0.82
CCNF-201ENST00000293968 APOC4P55056 127 aa9.93□□□□□ -0.82
CCNF-201ENST00000293968 Q8N9L7 120 aa9.93□□□□□ -0.82
CCNF-201ENST00000293968 SPART-AS1P0CW21 52 aa9.92□□□□□ -0.82
CCNF-201ENST00000293968 KRTAP10-3P60369 221 aa9.92□□□□□ -0.82
CCNF-201ENST00000293968 C6orf48Q9UBA6 75 aa9.92□□□□□ -0.82
CCNF-201ENST00000293968 FASNP49327 2511 aaKnown RBP9.92□□□□□ -0.82
CCNF-201ENST00000293968 LOC110117498A0A087WWA1 95 aa9.92□□□□□ -0.82
CCNF-201ENST00000293968 F8WEM9 126 aa9.92□□□□□ -0.82
CCNF-201ENST00000293968 IGLV6-57P01721 117 aa9.92□□□□□ -0.82
CCNF-201ENST00000293968 LELP1Q5T871 98 aa9.91□□□□□ -0.82
CCNF-201ENST00000293968 UBR5O95071 2799 aaPredicted RBP9.91□□□□□ -0.82
CCNF-201ENST00000293968 LYPD5Q6UWN5 251 aa9.9□□□□□ -0.82
CCNF-201ENST00000293968 PDE6GP18545 87 aa9.9□□□□□ -0.82
CCNF-201ENST00000293968 ITPR2Q14571 2701 aa9.89□□□□□ -0.83
CCNF-201ENST00000293968 C9orf66Q5T8R8 295 aa9.89□□□□□ -0.83
CCNF-201ENST00000293968 TM2D3Q9BRN9 247 aa9.89□□□□□ -0.83
CCNF-201ENST00000293968 NDUFC2-KCTD14E9PQ53 114 aa9.88□□□□□ -0.83
CCNF-201ENST00000293968 C3orf84H3BNL1 204 aa9.88□□□□□ -0.83
CCNF-201ENST00000293968 A0A0J9YWU9 116 aa9.88□□□□□ -0.83
CCNF-201ENST00000293968 IGHV4-30-4P0DP06 118 aa9.88□□□□□ -0.83
CCNF-201ENST00000293968 KRTAP1-1Q07627 177 aa9.88□□□□□ -0.83
CCNF-201ENST00000293968 H7BZZ5 65 aa9.87□□□□□ -0.83
CCNF-201ENST00000293968 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.87□□□□□ -0.83
CCNF-201ENST00000293968 UNC79Q9P2D8 2635 aa9.87□□□□□ -0.83
CCNF-201ENST00000293968 VWFP04275 2813 aa9.85□□□□□ -0.83
CCNF-201ENST00000293968 ATRQ13535 2644 aa9.85□□□□□ -0.83
CCNF-201ENST00000293968 WFDC10BQ8IUB3 73 aa9.85□□□□□ -0.83
CCNF-201ENST00000293968 NREPQ16612 68 aa9.85□□□□□ -0.83
CCNF-201ENST00000293968 Q5XG85 94 aa9.85□□□□□ -0.83
CCNF-201ENST00000293968 CXCL6P80162 114 aa9.84□□□□□ -0.83
CCNF-201ENST00000293968 IGKV2D-24A0A075B6R9 120 aa9.83□□□□□ -0.84
CCNF-201ENST00000293968 Q6ZRU5 148 aa9.83□□□□□ -0.84
CCNF-201ENST00000293968 SERP1Q9Y6X1 66 aa9.83□□□□□ -0.84
CCNF-201ENST00000293968 BPY2O14599 106 aa9.83□□□□□ -0.84
CCNF-201ENST00000293968 MIFP14174 115 aa9.83□□□□□ -0.84
CCNF-201ENST00000293968 Q8NAQ8 132 aa9.82□□□□□ -0.84
CCNF-201ENST00000293968 ELOF1P60002 83 aaKnown RBP9.82□□□□□ -0.84
CCNF-201ENST00000293968 H3BQ85 93 aa9.81□□□□□ -0.84
CCNF-201ENST00000293968 NKAPP1Q8N9T2 125 aa9.81□□□□□ -0.84
CCNF-201ENST00000293968 M0R378 163 aa9.81□□□□□ -0.84
CCNF-201ENST00000293968 HECTD1Q9ULT8 2610 aa9.8□□□□□ -0.84
CCNF-201ENST00000293968 RETNQ9HD89 108 aa9.8□□□□□ -0.84
CCNF-201ENST00000293968 PRR34Q9NV39 138 aa9.8□□□□□ -0.84
CCNF-201ENST00000293968 TRBV7-4A0A0J9YYF1 115 aa9.79□□□□□ -0.84
CCNF-201ENST00000293968 VPREB1P12018 145 aa9.79□□□□□ -0.84
CCNF-201ENST00000293968 C1orf43Q9BWL3 253 aa9.79□□□□□ -0.84
CCNF-201ENST00000293968 KLKP1Q107X0 134 aa9.78□□□□□ -0.84
CCNF-201ENST00000293968 KPRPQ5T749 579 aaPredicted RBP9.78□□□□□ -0.84
CCNF-201ENST00000293968 TMEM254Q8TBM7 123 aa9.77□□□□□ -0.85
CCNF-201ENST00000293968 GVQW2A0A096LPI5 108 aaPredicted RBP9.76□□□□□ -0.85
CCNF-201ENST00000293968 EGFEM1PQ0D2K5 195 aa9.76□□□□□ -0.85
CCNF-201ENST00000293968 MPLKIPQ8TAP9 179 aa9.76□□□□□ -0.85
CCNF-201ENST00000293968 F8P00451 2351 aa9.76□□□□□ -0.85
CCNF-201ENST00000293968 RPL37AP8A6NKH3 93 aa9.76□□□□□ -0.85
CCNF-201ENST00000293968 LINC00474Q9P2X8 69 aa9.75□□□□□ -0.85
CCNF-201ENST00000293968 TEP1Q99973 2627 aaKnown RBP9.75□□□□□ -0.85
CCNF-201ENST00000293968 INAFM1C9JVW0 142 aa9.75□□□□□ -0.85
CCNF-201ENST00000293968 TRBV7-6A0A0J9YX20 115 aa9.75□□□□□ -0.85
CCNF-201ENST00000293968 BCE1O60756 84 aa9.75□□□□□ -0.85
CCNF-201ENST00000293968 HELZ2Q9BYK8 2649 aaKnown RBP9.75□□□□□ -0.85
CCNF-201ENST00000293968 Q6ZRP5 223 aa9.73□□□□□ -0.85
CCNF-201ENST00000293968 LINC00528Q8N1L1 170 aa9.73□□□□□ -0.85
CCNF-201ENST00000293968 Q6ZTC4 211 aa9.73□□□□□ -0.85
CCNF-201ENST00000293968 SMIM26A0A096LP01 95 aa9.72□□□□□ -0.85
CCNF-201ENST00000293968 FAM30AQ9NZY2 134 aa9.72□□□□□ -0.85
CCNF-201ENST00000293968 SYCNQ0VAF6 134 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms