RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 SLPIP03973 132 aa13.4□□□□□ -0.26
CXCL16-201ENST00000293778 S100A7L2Q5SY68 101 aa13.4□□□□□ -0.26
CXCL16-201ENST00000293778 C6orf48Q9UBA6 75 aa13.39□□□□□ -0.27
CXCL16-201ENST00000293778 PKD1L1Q8TDX9 2849 aa13.39□□□□□ -0.27
CXCL16-201ENST00000293778 MAST4O15021 2626 aa13.38□□□□□ -0.27
CXCL16-201ENST00000293778 A0A1B0GX51 115 aa13.38□□□□□ -0.27
CXCL16-201ENST00000293778 KRTAP26-1Q6PEX3 210 aa13.38□□□□□ -0.27
CXCL16-201ENST00000293778 ORMDL1Q9P0S3 153 aa13.38□□□□□ -0.27
CXCL16-201ENST00000293778 NDUFV3P56181 108 aaKnown RBP13.37□□□□□ -0.27
CXCL16-201ENST00000293778 C9orf129Q5T035 196 aaKnown RBP13.37□□□□□ -0.27
CXCL16-201ENST00000293778 CMYA5Q8N3K9 4069 aa13.36□□□□□ -0.27
CXCL16-201ENST00000293778 ZNF561-AS1K7EIQ3 104 aa13.36□□□□□ -0.27
CXCL16-201ENST00000293778 LINC00167Q96N53 147 aa13.36□□□□□ -0.27
CXCL16-201ENST00000293778 HIGD2BQ4VC39 106 aa13.36□□□□□ -0.27
CXCL16-201ENST00000293778 C6orf99Q4VX62 202 aa13.36□□□□□ -0.27
CXCL16-201ENST00000293778 Q8N814 137 aa13.36□□□□□ -0.27
CXCL16-201ENST00000293778 GAGE2AQ6NT46 116 aa13.35□□□□□ -0.27
CXCL16-201ENST00000293778 SMIM20Q8N5G0 67 aa13.35□□□□□ -0.27
CXCL16-201ENST00000293778 OBSCN-AS1Q96MR7 158 aa13.35□□□□□ -0.27
CXCL16-201ENST00000293778 TENM3Q9P273 2699 aa13.34□□□□□ -0.27
CXCL16-201ENST00000293778 CAMK2N2Q96S95 79 aa13.34□□□□□ -0.27
CXCL16-201ENST00000293778 RPL18AQ02543 176 aaKnown RBP13.33□□□□□ -0.27
CXCL16-201ENST00000293778 LINC01556Q5JQF7 62 aa13.33□□□□□ -0.27
CXCL16-201ENST00000293778 C14orf132Q9NPU4 83 aa13.33□□□□□ -0.27
CXCL16-201ENST00000293778 ANK2Q01484 3957 aa13.32□□□□□ -0.28
CXCL16-201ENST00000293778 SMCR5Q8TEV8 140 aa13.32□□□□□ -0.28
CXCL16-201ENST00000293778 CCDC179H3BU77 68 aa13.32□□□□□ -0.28
CXCL16-201ENST00000293778 C1orf43Q9BWL3 253 aa13.32□□□□□ -0.28
CXCL16-201ENST00000293778 XAGE1AQ9HD64 81 aa13.32□□□□□ -0.28
CXCL16-201ENST00000293778 IGLV6-57P01721 117 aa13.31□□□□□ -0.28
CXCL16-201ENST00000293778 C15orf56Q8N910 161 aa13.31□□□□□ -0.28
CXCL16-201ENST00000293778 SDIM1Q6ZPB5 146 aa13.3□□□□□ -0.28
CXCL16-201ENST00000293778 LINC00643Q86TS7 51 aa13.29□□□□□ -0.28
CXCL16-201ENST00000293778 DNAH3Q8TD57 4116 aa13.29□□□□□ -0.28
CXCL16-201ENST00000293778 TRBV7-7A0A0K0K1E9 115 aa13.29□□□□□ -0.28
CXCL16-201ENST00000293778 PRB2P02812 416 aaPredicted RBP13.29□□□□□ -0.28
CXCL16-201ENST00000293778 IGKV2D-24A0A075B6R9 120 aa13.28□□□□□ -0.28
CXCL16-201ENST00000293778 LINC00575Q6W349 94 aa13.28□□□□□ -0.28
CXCL16-201ENST00000293778 Q6ZRU5 148 aa13.28□□□□□ -0.28
CXCL16-201ENST00000293778 C2orf48Q96LS8 159 aa13.28□□□□□ -0.28
CXCL16-201ENST00000293778 TMEM256-PLSCR3K7ERE1 68 aa13.27□□□□□ -0.29
CXCL16-201ENST00000293778 TRAV10A0A0B4J240 114 aa13.26□□□□□ -0.29
CXCL16-201ENST00000293778 TRBV10-3A0A0K0K1G6 114 aa13.25□□□□□ -0.29
CXCL16-201ENST00000293778 DNAH10OSP0CZ25 163 aa13.25□□□□□ -0.29
CXCL16-201ENST00000293778 TM2D3Q9BRN9 247 aa13.24□□□□□ -0.29
CXCL16-201ENST00000293778 TRAV23DV6A0A075B6W5 121 aa13.23□□□□□ -0.29
CXCL16-201ENST00000293778 hADV29S1A0JD25 119 aa13.23□□□□□ -0.29
CXCL16-201ENST00000293778 NDUFC2-KCTD14E9PQ53 114 aa13.23□□□□□ -0.29
CXCL16-201ENST00000293778 JMJD7-PLA2G4BH0Y9G9 81 aa13.23□□□□□ -0.29
CXCL16-201ENST00000293778 IMUPQ9GZP8 106 aa13.23□□□□□ -0.29
CXCL16-201ENST00000293778 MRAPQ8TCY5 172 aa13.21□□□□□ -0.29
CXCL16-201ENST00000293778 K7EIL1 84 aa13.21□□□□□ -0.29
CXCL16-201ENST00000293778 VPREB1P12018 145 aa13.21□□□□□ -0.29
CXCL16-201ENST00000293778 NOTCH1P46531 2555 aa13.21□□□□□ -0.3
CXCL16-201ENST00000293778 F8WDY8 70 aa13.2□□□□□ -0.3
CXCL16-201ENST00000293778 DIRC1Q969H9 104 aa13.2□□□□□ -0.3
CXCL16-201ENST00000293778 LINC00588Q9Y4M8 146 aa13.19□□□□□ -0.3
CXCL16-201ENST00000293778 CCKP06307 115 aa13.18□□□□□ -0.3
CXCL16-201ENST00000293778 SYCNQ0VAF6 134 aa13.18□□□□□ -0.3
CXCL16-201ENST00000293778 LINC00846Q9NV44 126 aa13.17□□□□□ -0.3
CXCL16-201ENST00000293778 COL6A5A8TX70 2615 aa13.17□□□□□ -0.3
CXCL16-201ENST00000293778 M0R378 163 aa13.17□□□□□ -0.3
CXCL16-201ENST00000293778 ZNF73O43830 326 aaPredicted RBP13.17□□□□□ -0.3
CXCL16-201ENST00000293778 Q6ZRP5 223 aa13.16□□□□□ -0.3
CXCL16-201ENST00000293778 COX7BP24311 80 aa13.14□□□□□ -0.31
CXCL16-201ENST00000293778 Q6ZQY7 126 aa13.13□□□□□ -0.31
CXCL16-201ENST00000293778 FAM236AA0A1B0GUQ0 79 aa13.12□□□□□ -0.31
CXCL16-201ENST00000293778 FAM236BA0A1B0GV22 79 aa13.12□□□□□ -0.31
CXCL16-201ENST00000293778 TRBV7-6A0A0J9YX20 115 aa13.12□□□□□ -0.31
CXCL16-201ENST00000293778 ELOF1P60002 83 aaKnown RBP13.12□□□□□ -0.31
CXCL16-201ENST00000293778 LAMTOR3Q9UHA4 124 aa13.1□□□□□ -0.31
CXCL16-201ENST00000293778 Q6JHZ5 121 aa13.09□□□□□ -0.31
CXCL16-201ENST00000293778 NBEAL1Q6ZS30 2694 aa13.09□□□□□ -0.31
CXCL16-201ENST00000293778 H3BQ85 93 aa13.09□□□□□ -0.31
CXCL16-201ENST00000293778 RBM3P98179 157 aaKnown RBP13.09□□□□□ -0.31
CXCL16-201ENST00000293778 USP17L23D6RBM5 183 aa13.07□□□□□ -0.32
CXCL16-201ENST00000293778 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.07□□□□□ -0.32
CXCL16-201ENST00000293778 CASC10Q5T4H9 136 aa13.07□□□□□ -0.32
CXCL16-201ENST00000293778 RMI2Q96E14 147 aa13.07□□□□□ -0.32
CXCL16-201ENST00000293778 IGKV3D-7A0A0C4DH55 119 aa13.06□□□□□ -0.32
CXCL16-201ENST00000293778 TLX1NBP0CAT3 122 aa13.04□□□□□ -0.32
CXCL16-201ENST00000293778 Q6ZQT0 140 aa13.04□□□□□ -0.32
CXCL16-201ENST00000293778 NKAPP1Q8N9T2 125 aa13.04□□□□□ -0.32
CXCL16-201ENST00000293778 UPK3BQ9BT76 320 aa13.04□□□□□ -0.32
CXCL16-201ENST00000293778 LOC110117498A0A087WWA1 95 aa13.04□□□□□ -0.32
CXCL16-201ENST00000293778 HUWE1Q7Z6Z7 4374 aaKnown RBP13.03□□□□□ -0.32
CXCL16-201ENST00000293778 LINC00528Q8N1L1 170 aa13.03□□□□□ -0.32
CXCL16-201ENST00000293778 GHRHP01286 108 aa13.03□□□□□ -0.32
CXCL16-201ENST00000293778 SERTAD4-AS1Q5TG53 156 aa13.03□□□□□ -0.32
CXCL16-201ENST00000293778 DSCR8Q96T75 97 aa13.01□□□□□ -0.33
CXCL16-201ENST00000293778 C7orf33Q8WU49 177 aa13□□□□□ -0.33
CXCL16-201ENST00000293778 KCNQ1DNQ9H478 68 aa12.98□□□□□ -0.33
CXCL16-201ENST00000293778 PLA2G2DQ9UNK4 145 aa12.98□□□□□ -0.33
CXCL16-201ENST00000293778 C5orf47Q569G3 176 aa12.97□□□□□ -0.33
CXCL16-201ENST00000293778 UBL5Q9BZL1 73 aa12.97□□□□□ -0.33
CXCL16-201ENST00000293778 PDE6GP18545 87 aa12.97□□□□□ -0.33
CXCL16-201ENST00000293778 HIST1H4AP62805 103 aaKnown RBP12.96□□□□□ -0.33
CXCL16-201ENST00000293778 ATP5EP2Q5VTU8 51 aa12.96□□□□□ -0.34
CXCL16-201ENST00000293778 MGAM2Q2M2H8 2515 aa12.95□□□□□ -0.34
CXCL16-201ENST00000293778 M0R2N4 97 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms