RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 SLC7A5P1Q8MH63 180 aa5.94□□□□□ -1.46
CCDC58-201ENST00000291458 PRR26Q8N8Z3 221 aa5.94□□□□□ -1.46
CCDC58-201ENST00000291458 DIRC1Q969H9 104 aa5.94□□□□□ -1.46
CCDC58-201ENST00000291458 YPEL4Q96NS1 127 aa5.94□□□□□ -1.46
CCDC58-201ENST00000291458 H0Y9J4 135 aa5.93□□□□□ -1.46
CCDC58-201ENST00000291458 MRPL55Q7Z7F7 128 aaKnown RBP5.93□□□□□ -1.46
CCDC58-201ENST00000291458 FAM19A2Q8N3H0 131 aa5.93□□□□□ -1.46
CCDC58-201ENST00000291458 NKAPP1Q8N9T2 125 aa5.93□□□□□ -1.46
CCDC58-201ENST00000291458 CHTOPQ9Y3Y2 248 aaKnown RBP5.93□□□□□ -1.46
CCDC58-201ENST00000291458 IFI27L1Q96BM0 104 aa5.92□□□□□ -1.46
CCDC58-201ENST00000291458 IGLV5-39A0A0G2JS06 123 aa5.91□□□□□ -1.46
CCDC58-201ENST00000291458 A0A0U1RRA0 63 aa5.91□□□□□ -1.46
CCDC58-201ENST00000291458 HSBP1O75506 76 aa5.91□□□□□ -1.46
CCDC58-201ENST00000291458 TRGC2P03986 189 aa5.91□□□□□ -1.46
CCDC58-201ENST00000291458 KRTAP10-8P60410 259 aa5.91□□□□□ -1.46
CCDC58-201ENST00000291458 LBHQ53QV2 105 aaPredicted RBP5.91□□□□□ -1.46
CCDC58-201ENST00000291458 CHCHD1Q96BP2 118 aaKnown RBP5.91□□□□□ -1.46
CCDC58-201ENST00000291458 ERG28Q9UKR5 140 aa5.91□□□□□ -1.46
CCDC58-201ENST00000291458 IGKV2-28A0A075B6P5 120 aa5.9□□□□□ -1.46
CCDC58-201ENST00000291458 IGKV2D-28P01615 120 aa5.9□□□□□ -1.46
CCDC58-201ENST00000291458 LINC00167Q96N53 147 aa5.9□□□□□ -1.46
CCDC58-201ENST00000291458 KRTAP4-2Q9BYR5 136 aa5.9□□□□□ -1.46
CCDC58-201ENST00000291458 SND1-IT1Q9HBX3 110 aa5.89□□□□□ -1.47
CCDC58-201ENST00000291458 NUPR1O60356 82 aa5.88□□□□□ -1.47
CCDC58-201ENST00000291458 SERF1AO75920 110 aa5.88□□□□□ -1.47
CCDC58-201ENST00000291458 UBE2AP49459 152 aa5.88□□□□□ -1.47
CCDC58-201ENST00000291458 LINC00158P58513 81 aa5.88□□□□□ -1.47
CCDC58-201ENST00000291458 TP73-AS1Q9UF72 201 aa5.88□□□□□ -1.47
CCDC58-201ENST00000291458 TMEM223A0PJW6 202 aa5.87□□□□□ -1.47
CCDC58-201ENST00000291458 ZNF861PO60384 105 aa5.87□□□□□ -1.47
CCDC58-201ENST00000291458 BCE1O60756 84 aa5.87□□□□□ -1.47
CCDC58-201ENST00000291458 KRTAP1-4P0C5Y4 121 aa5.87□□□□□ -1.47
CCDC58-201ENST00000291458 MEIG1Q5JSS6 88 aa5.87□□□□□ -1.47
CCDC58-201ENST00000291458 PMCHL2Q9BQD1 86 aa5.87□□□□□ -1.47
CCDC58-201ENST00000291458 TRAV12-1A0A0B4J245 112 aa5.86□□□□□ -1.47
CCDC58-201ENST00000291458 FABP4P15090 132 aa5.86□□□□□ -1.47
CCDC58-201ENST00000291458 RPL28P46779 137 aaKnown RBP5.86□□□□□ -1.47
CCDC58-201ENST00000291458 PRLHP81277 87 aa5.86□□□□□ -1.47
CCDC58-201ENST00000291458 Q8NDZ9 215 aa5.86□□□□□ -1.47
CCDC58-201ENST00000291458 IGLV5-37A0A075B6J1 123 aa5.85□□□□□ -1.47
CCDC58-201ENST00000291458 TMEM238C9JI98 176 aa5.85□□□□□ -1.47
CCDC58-201ENST00000291458 ATP6V1G1O75348 118 aa5.85□□□□□ -1.47
CCDC58-201ENST00000291458 LEPROTL1O95214 131 aa5.85□□□□□ -1.47
CCDC58-201ENST00000291458 SMIM13P0DJ93 91 aa5.85□□□□□ -1.47
CCDC58-201ENST00000291458 VPREB1P12018 145 aa5.85□□□□□ -1.47
CCDC58-201ENST00000291458 ANAPC11Q9NYG5 84 aa5.85□□□□□ -1.47
CCDC58-201ENST00000291458 IGLV1-50A0A075B6I6 118 aa5.84□□□□□ -1.47
CCDC58-201ENST00000291458 NCR3O14931 201 aa5.84□□□□□ -1.47
CCDC58-201ENST00000291458 FAM19A1Q7Z5A9 133 aa5.84□□□□□ -1.47
CCDC58-201ENST00000291458 COLCA2A8K830 154 aa5.83□□□□□ -1.48
CCDC58-201ENST00000291458 TSPEAR-AS2P59090 65 aa5.83□□□□□ -1.48
CCDC58-201ENST00000291458 RPL24P83731 157 aaKnown RBP5.83□□□□□ -1.48
CCDC58-201ENST00000291458 COX17Q14061 63 aa5.83□□□□□ -1.48
CCDC58-201ENST00000291458 NDUFA12Q9UI09 145 aa5.83□□□□□ -1.48
CCDC58-201ENST00000291458 RPL13AP40429 203 aaKnown RBP5.82□□□□□ -1.48
CCDC58-201ENST00000291458 SFTA2Q6UW10 78 aa5.82□□□□□ -1.48
CCDC58-201ENST00000291458 MIR7-3HGQ8N6C7 128 aa5.82□□□□□ -1.48
CCDC58-201ENST00000291458 DAND5Q8N907 189 aa5.82□□□□□ -1.48
CCDC58-201ENST00000291458 HSPB8Q9UJY1 196 aa5.82□□□□□ -1.48
CCDC58-201ENST00000291458 A0A087X002 238 aa5.81□□□□□ -1.48
CCDC58-201ENST00000291458 TSPAN13O95857 204 aa5.81□□□□□ -1.48
CCDC58-201ENST00000291458 BOD1L2Q8IYS8 172 aa5.81□□□□□ -1.48
CCDC58-201ENST00000291458 TMEM126AQ9H061 195 aa5.81□□□□□ -1.48
CCDC58-201ENST00000291458 TNXBP22105 4242 aa5.81□□□□□ -1.48
CCDC58-201ENST00000291458 MYMXA0A1B0GTQ4 84 aa5.8□□□□□ -1.48
CCDC58-201ENST00000291458 DPM2O94777 84 aa5.8□□□□□ -1.48
CCDC58-201ENST00000291458 HIGD2AQ9BW72 106 aa5.8□□□□□ -1.48
CCDC58-201ENST00000291458 HMCN2Q8NDA2 5059 aa5.8□□□□□ -1.48
CCDC58-201ENST00000291458 M0R378 163 aa5.79□□□□□ -1.48
CCDC58-201ENST00000291458 LEPROTO15243 131 aa5.79□□□□□ -1.48
CCDC58-201ENST00000291458 LGALS3P17931 250 aaKnown RBP5.79□□□□□ -1.48
CCDC58-201ENST00000291458 PLNP26678 52 aa5.79□□□□□ -1.48
CCDC58-201ENST00000291458 HERVK_113P61574 105 aa5.79□□□□□ -1.48
CCDC58-201ENST00000291458 PRR4Q16378 134 aa5.79□□□□□ -1.48
CCDC58-201ENST00000291458 KRTAP13-1Q8IUC0 172 aa5.79□□□□□ -1.48
CCDC58-201ENST00000291458 TYMSOSQ8TAI1 123 aa5.79□□□□□ -1.48
CCDC58-201ENST00000291458 J3QQQ9 107 aa5.78□□□□□ -1.48
CCDC58-201ENST00000291458 IGKCP01834 107 aa5.78□□□□□ -1.48
CCDC58-201ENST00000291458 CRYGAP11844 174 aa5.78□□□□□ -1.48
CCDC58-201ENST00000291458 NPC2P61916 151 aa5.78□□□□□ -1.48
CCDC58-201ENST00000291458 HERV-K104P63124 156 aa5.78□□□□□ -1.48
CCDC58-201ENST00000291458 PLEKHB2Q96CS7 222 aa5.78□□□□□ -1.48
CCDC58-201ENST00000291458 HIST1H2BKO60814 126 aa5.77□□□□□ -1.49
CCDC58-201ENST00000291458 HIST1H2BJP06899 126 aa5.77□□□□□ -1.49
CCDC58-201ENST00000291458 HIST1H2BOP23527 126 aa5.77□□□□□ -1.49
CCDC58-201ENST00000291458 HIST1H2BBP33778 126 aa5.77□□□□□ -1.49
CCDC58-201ENST00000291458 HIST1H2BDP58876 126 aa5.77□□□□□ -1.49
CCDC58-201ENST00000291458 HIST1H2BCP62807 126 aa5.77□□□□□ -1.49
CCDC58-201ENST00000291458 HIST2H2BEQ16778 126 aa5.77□□□□□ -1.49
CCDC58-201ENST00000291458 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.77□□□□□ -1.49
CCDC58-201ENST00000291458 HIST1H2BHQ93079 126 aa5.77□□□□□ -1.49
CCDC58-201ENST00000291458 HIST1H2BNQ99877 126 aa5.77□□□□□ -1.49
CCDC58-201ENST00000291458 HIST1H2BMQ99879 126 aa5.77□□□□□ -1.49
CCDC58-201ENST00000291458 MAP1LC3CQ9BXW4 147 aa5.77□□□□□ -1.49
CCDC58-201ENST00000291458 TRBV10-3A0A0K0K1G6 114 aa5.76□□□□□ -1.49
CCDC58-201ENST00000291458 KRTAP13-2Q52LG2 175 aa5.76□□□□□ -1.49
CCDC58-201ENST00000291458 PRYO14603 147 aa5.75□□□□□ -1.49
CCDC58-201ENST00000291458 MIEN1Q9BRT3 115 aa5.75□□□□□ -1.49
CCDC58-201ENST00000291458 IGKV2D-26A0A0A0MRZ7 120 aa5.74□□□□□ -1.49
CCDC58-201ENST00000291458 ETDCA0A1B0GVM5 59 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms