RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 A0A096LNI7 61 aa6.59□□□□□ -1.35
SNF8-201ENST00000290330 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.59□□□□□ -1.35
SNF8-201ENST00000290330 TMEM238C9JI98 176 aa6.59□□□□□ -1.35
SNF8-201ENST00000290330 SMIM13P0DJ93 91 aa6.59□□□□□ -1.35
SNF8-201ENST00000290330 SRSF9Q13242 221 aaKnown RBP eCLIP6.59□□□□□ -1.35
SNF8-201ENST00000290330 LINC00242Q5T6M2 205 aa6.59□□□□□ -1.35
SNF8-201ENST00000290330 TRAV13-1A0A0B4J241 112 aa6.58□□□□□ -1.36
SNF8-201ENST00000290330 ZNF561-AS1K7EIQ3 104 aa6.58□□□□□ -1.36
SNF8-201ENST00000290330 SYCNQ0VAF6 134 aa6.58□□□□□ -1.36
SNF8-201ENST00000290330 SERTAD4-AS1Q5TG53 156 aa6.58□□□□□ -1.36
SNF8-201ENST00000290330 SFTA2Q6UW10 78 aa6.58□□□□□ -1.36
SNF8-201ENST00000290330 Q6ZRU5 148 aa6.58□□□□□ -1.36
SNF8-201ENST00000290330 Q6ZVH6 145 aa6.58□□□□□ -1.36
SNF8-201ENST00000290330 C7orf33Q8WU49 177 aa6.58□□□□□ -1.36
SNF8-201ENST00000290330 COPS9Q8WXC6 57 aa6.58□□□□□ -1.36
SNF8-201ENST00000290330 CARD19Q96LW7 228 aa6.58□□□□□ -1.36
SNF8-201ENST00000290330 COX7A2LO14548 114 aa6.57□□□□□ -1.36
SNF8-201ENST00000290330 TIMM17BO60830 172 aa6.57□□□□□ -1.36
SNF8-201ENST00000290330 MALP21145 153 aa6.57□□□□□ -1.36
SNF8-201ENST00000290330 TSPEAR-AS2P59090 65 aa6.57□□□□□ -1.36
SNF8-201ENST00000290330 LINC00474Q9P2X8 69 aa6.57□□□□□ -1.36
SNF8-201ENST00000290330 CDKN2A-AS1Q9UH64 79 aa6.57□□□□□ -1.36
SNF8-201ENST00000290330 NDUFA12Q9UI09 145 aa6.57□□□□□ -1.36
SNF8-201ENST00000290330 PKIGQ9Y2B9 76 aa6.57□□□□□ -1.36
SNF8-201ENST00000290330 IGLV5-39A0A0G2JS06 123 aa6.56□□□□□ -1.36
SNF8-201ENST00000290330 TAX1BP3O14907 124 aa6.56□□□□□ -1.36
SNF8-201ENST00000290330 NDUFA1O15239 70 aa6.56□□□□□ -1.36
SNF8-201ENST00000290330 SPINK8P0C7L1 97 aa6.56□□□□□ -1.36
SNF8-201ENST00000290330 HERV-K104P63124 156 aa6.56□□□□□ -1.36
SNF8-201ENST00000290330 LINC01561Q8N1V8 128 aa6.56□□□□□ -1.36
SNF8-201ENST00000290330 KRTAP9-2Q9BYQ4 174 aa6.56□□□□□ -1.36
SNF8-201ENST00000290330 FAT3Q8TDW7 4589 aa6.55□□□□□ -1.36
SNF8-201ENST00000290330 A0A0J9YXY3 114 aa6.55□□□□□ -1.36
SNF8-201ENST00000290330 C9orf118A6NHY6 69 aa6.55□□□□□ -1.36
SNF8-201ENST00000290330 MT1HL1P0DM35 61 aa6.55□□□□□ -1.36
SNF8-201ENST00000290330 RPL24P83731 157 aaKnown RBP6.55□□□□□ -1.36
SNF8-201ENST00000290330 C5orf38Q86SI9 138 aa6.55□□□□□ -1.36
SNF8-201ENST00000290330 KRTAP9-6A0A140TA67 174 aa6.54□□□□□ -1.36
SNF8-201ENST00000290330 A0A1B0GWB2 263 aa6.54□□□□□ -1.36
SNF8-201ENST00000290330 SMIM1B2RUZ4 78 aa6.54□□□□□ -1.36
SNF8-201ENST00000290330 FXYD2P54710 66 aa6.54□□□□□ -1.36
SNF8-201ENST00000290330 PRR3P79522 188 aaKnown RBP6.54□□□□□ -1.36
SNF8-201ENST00000290330 VAMP3Q15836 100 aa6.54□□□□□ -1.36
SNF8-201ENST00000290330 CAMK2N2Q96S95 79 aa6.54□□□□□ -1.36
SNF8-201ENST00000290330 SPANXDQ9BXN6 97 aa6.54□□□□□ -1.36
SNF8-201ENST00000290330 NHP2Q9NX24 153 aaKnown RBP6.54□□□□□ -1.36
SNF8-201ENST00000290330 SPANXCQ9NY87 97 aa6.54□□□□□ -1.36
SNF8-201ENST00000290330 LOC107984640A0A0U1RRK4 108 aa6.53□□□□□ -1.36
SNF8-201ENST00000290330 APOMO95445 188 aa6.53□□□□□ -1.36
SNF8-201ENST00000290330 IFITM1P13164 125 aa6.53□□□□□ -1.36
SNF8-201ENST00000290330 GAGE2BQ13066 116 aa6.53□□□□□ -1.36
SNF8-201ENST00000290330 GTF2H5Q6ZYL4 71 aa6.53□□□□□ -1.36
SNF8-201ENST00000290330 C2orf48Q96LS8 159 aa6.53□□□□□ -1.36
SNF8-201ENST00000290330 A0A087WZ39 114 aa6.52□□□□□ -1.37
SNF8-201ENST00000290330 IGHV3OR16-9A0A0B4J2B5 98 aa6.52□□□□□ -1.37
SNF8-201ENST00000290330 SPAG11BQ08648 103 aa6.52□□□□□ -1.37
SNF8-201ENST00000290330 LYRM7Q5U5X0 104 aa6.52□□□□□ -1.37
SNF8-201ENST00000290330 PPDPFQ9H3Y8 114 aa6.52□□□□□ -1.37
SNF8-201ENST00000290330 HMCN2Q8NDA2 5059 aa6.52□□□□□ -1.37
SNF8-201ENST00000290330 FABP2P12104 132 aa6.51□□□□□ -1.37
SNF8-201ENST00000290330 UBE2V1Q13404 147 aa6.51□□□□□ -1.37
SNF8-201ENST00000290330 COX7B2Q8TF08 81 aa6.51□□□□□ -1.37
SNF8-201ENST00000290330 PLA2G2DQ9UNK4 145 aa6.51□□□□□ -1.37
SNF8-201ENST00000290330 A0A1W2PNN7 141 aa6.5□□□□□ -1.37
SNF8-201ENST00000290330 A0A1W2PPM0 123 aa6.5□□□□□ -1.37
SNF8-201ENST00000290330 PRSS2P07478 247 aa6.5□□□□□ -1.37
SNF8-201ENST00000290330 RNF151Q2KHN1 245 aa6.5□□□□□ -1.37
SNF8-201ENST00000290330 RAB37Q96AX2 223 aa6.5□□□□□ -1.37
SNF8-201ENST00000290330 A0A0B4J2C4 111 aa6.49□□□□□ -1.37
SNF8-201ENST00000290330 H3BUT2 72 aa6.49□□□□□ -1.37
SNF8-201ENST00000290330 CXCL5P42830 114 aa6.49□□□□□ -1.37
SNF8-201ENST00000290330 Q6ZRP5 223 aa6.49□□□□□ -1.37
SNF8-201ENST00000290330 ZNF625Q96I27 306 aaPredicted RBP6.49□□□□□ -1.37
SNF8-201ENST00000290330 LINC01600Q96MT4 127 aa6.49□□□□□ -1.37
SNF8-201ENST00000290330 PKHD1L1Q86WI1 4243 aa6.49□□□□□ -1.37
SNF8-201ENST00000290330 GAGE10A6NGK3 116 aa6.48□□□□□ -1.37
SNF8-201ENST00000290330 F8WDY8 70 aa6.48□□□□□ -1.37
SNF8-201ENST00000290330 RPL18AQ02543 176 aaKnown RBP6.48□□□□□ -1.37
SNF8-201ENST00000290330 C9orf116Q5BN46 136 aaPredicted RBP6.48□□□□□ -1.37
SNF8-201ENST00000290330 MEIG1Q5JSS6 88 aa6.48□□□□□ -1.37
SNF8-201ENST00000290330 SPINK6Q6UWN8 80 aa6.48□□□□□ -1.37
SNF8-201ENST00000290330 MUSTN1Q8IVN3 82 aa6.48□□□□□ -1.37
SNF8-201ENST00000290330 Q8IZM0 81 aa6.48□□□□□ -1.37
SNF8-201ENST00000290330 PRO1854Q9UHT4 67 aa6.48□□□□□ -1.37
SNF8-201ENST00000290330 K7ERJ3 54 aa6.47□□□□□ -1.37
SNF8-201ENST00000290330 C6orf226Q5I0X4 101 aa6.47□□□□□ -1.37
SNF8-201ENST00000290330 C10orf25Q5T742 122 aa6.47□□□□□ -1.37
SNF8-201ENST00000290330 LITAFQ99732 161 aa6.47□□□□□ -1.37
SNF8-201ENST00000290330 A4D1N5 150 aa6.46□□□□□ -1.38
SNF8-201ENST00000290330 K7EP34 96 aa6.46□□□□□ -1.38
SNF8-201ENST00000290330 KIAA0087Q14695 138 aa6.46□□□□□ -1.38
SNF8-201ENST00000290330 UNQ6190/PRO20217Q6UXQ8 127 aa6.46□□□□□ -1.38
SNF8-201ENST00000290330 TOMM7Q9P0U1 55 aa6.46□□□□□ -1.38
SNF8-201ENST00000290330 C6orf48Q9UBA6 75 aa6.46□□□□□ -1.38
SNF8-201ENST00000290330 SPCS1Q9Y6A9 102 aa6.46□□□□□ -1.38
SNF8-201ENST00000290330 TLX1NBP0CAT3 122 aa6.45□□□□□ -1.38
SNF8-201ENST00000290330 CFC1BP0CG36 223 aa6.45□□□□□ -1.38
SNF8-201ENST00000290330 CFC1P0CG37 223 aa6.45□□□□□ -1.38
SNF8-201ENST00000290330 CKS1BP61024 79 aa6.45□□□□□ -1.38
SNF8-201ENST00000290330 ADAMTSL4-AS1Q5T5F5 129 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms