RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 UPK3BQ9BT76 320 aa5.81□□□□□ -1.48
PTPDC1-201ENST00000288976 USP17L23D6RBM5 183 aa5.8□□□□□ -1.48
PTPDC1-201ENST00000288976 SLPIP03973 132 aa5.8□□□□□ -1.48
PTPDC1-201ENST00000288976 C6orf99Q4VX62 202 aa5.8□□□□□ -1.48
PTPDC1-201ENST00000288976 SCXQ7RTU7 201 aa5.8□□□□□ -1.48
PTPDC1-201ENST00000288976 Q9UF83 564 aa5.8□□□□□ -1.48
PTPDC1-201ENST00000288976 APLNQ9ULZ1 77 aa5.8□□□□□ -1.48
PTPDC1-201ENST00000288976 IGLV4-69A0A075B6H9 119 aa5.8□□□□□ -1.48
PTPDC1-201ENST00000288976 C1orf137Q5JT78 98 aa5.8□□□□□ -1.48
PTPDC1-201ENST00000288976 LYPD5Q6UWN5 251 aa5.8□□□□□ -1.48
PTPDC1-201ENST00000288976 CLEC2BQ92478 149 aa5.8□□□□□ -1.48
PTPDC1-201ENST00000288976 DNAH1Q9P2D7 4330 aa5.8□□□□□ -1.48
PTPDC1-201ENST00000288976 A0A096LNJ9 63 aa5.79□□□□□ -1.48
PTPDC1-201ENST00000288976 TRBV10-2A0A0K0K1G8 114 aa5.79□□□□□ -1.48
PTPDC1-201ENST00000288976 MRPS36P82909 103 aaKnown RBP5.79□□□□□ -1.48
PTPDC1-201ENST00000288976 UNQ6190/PRO20217Q6UXQ8 127 aa5.79□□□□□ -1.48
PTPDC1-201ENST00000288976 NTM-AS1Q6ZSK4 140 aa5.79□□□□□ -1.48
PTPDC1-201ENST00000288976 TRBV20-1A0A075B6N2 111 aa5.79□□□□□ -1.48
PTPDC1-201ENST00000288976 C9orf116Q5BN46 136 aaPredicted RBP5.79□□□□□ -1.48
PTPDC1-201ENST00000288976 H0YGX0 51 aa5.79□□□□□ -1.48
PTPDC1-201ENST00000288976 COX8AP10176 69 aa5.79□□□□□ -1.48
PTPDC1-201ENST00000288976 C3orf84H3BNL1 204 aa5.78□□□□□ -1.48
PTPDC1-201ENST00000288976 IFITM1P13164 125 aa5.78□□□□□ -1.48
PTPDC1-201ENST00000288976 A0A1B0GUV1 79 aa5.78□□□□□ -1.48
PTPDC1-201ENST00000288976 K7EP13 123 aa5.78□□□□□ -1.48
PTPDC1-201ENST00000288976 RBM3P98179 157 aaKnown RBP5.78□□□□□ -1.48
PTPDC1-201ENST00000288976 M0QXV9 152 aa5.78□□□□□ -1.48
PTPDC1-201ENST00000288976 CD164L2Q6UWJ8 174 aa5.77□□□□□ -1.49
PTPDC1-201ENST00000288976 CEND1Q8N111 149 aa5.77□□□□□ -1.49
PTPDC1-201ENST00000288976 IGIPA6NJ69 53 aa5.77□□□□□ -1.49
PTPDC1-201ENST00000288976 LOC107984640A0A0U1RRK4 108 aa5.77□□□□□ -1.49
PTPDC1-201ENST00000288976 FAM19A3Q7Z5A8 133 aa5.77□□□□□ -1.49
PTPDC1-201ENST00000288976 LINC00959A0A1B0GUT2 108 aa5.76□□□□□ -1.49
PTPDC1-201ENST00000288976 MP68P56378 58 aa5.76□□□□□ -1.49
PTPDC1-201ENST00000288976 FAM236DA0A1B0GTK5 79 aa5.76□□□□□ -1.49
PTPDC1-201ENST00000288976 FAM236CP0DP71 79 aa5.76□□□□□ -1.49
PTPDC1-201ENST00000288976 SPATA12Q7Z6I5 190 aa5.76□□□□□ -1.49
PTPDC1-201ENST00000288976 IGLV4-3A0A075B6K6 122 aa5.76□□□□□ -1.49
PTPDC1-201ENST00000288976 ESRGQ1W209 222 aa5.76□□□□□ -1.49
PTPDC1-201ENST00000288976 VPS13DQ5THJ4 4388 aa5.75□□□□□ -1.49
PTPDC1-201ENST00000288976 FAM229AH3BQW9 127 aa5.75□□□□□ -1.49
PTPDC1-201ENST00000288976 AMELXQ99217 191 aa5.75□□□□□ -1.49
PTPDC1-201ENST00000288976 SRRM2Q9UQ35 2752 aaKnown RBP5.75□□□□□ -1.49
PTPDC1-201ENST00000288976 DNAH10OSP0CZ25 163 aa5.75□□□□□ -1.49
PTPDC1-201ENST00000288976 Q6Q795 121 aa5.75□□□□□ -1.49
PTPDC1-201ENST00000288976 Q6ZQY7 126 aa5.75□□□□□ -1.49
PTPDC1-201ENST00000288976 SPANXCQ9NY87 97 aa5.75□□□□□ -1.49
PTPDC1-201ENST00000288976 FBN3Q75N90 2809 aa5.75□□□□□ -1.49
PTPDC1-201ENST00000288976 COL7A1Q02388 2944 aa5.74□□□□□ -1.49
PTPDC1-201ENST00000288976 BPY2O14599 106 aa5.74□□□□□ -1.49
PTPDC1-201ENST00000288976 RETNLBQ9BQ08 111 aa5.74□□□□□ -1.49
PTPDC1-201ENST00000288976 STARD9Q9P2P6 4700 aa5.74□□□□□ -1.49
PTPDC1-201ENST00000288976 LINC00588Q9Y4M8 146 aa5.74□□□□□ -1.49
PTPDC1-201ENST00000288976 PLECQ15149 4684 aaKnown RBP5.74□□□□□ -1.49
PTPDC1-201ENST00000288976 CCKP06307 115 aa5.74□□□□□ -1.49
PTPDC1-201ENST00000288976 WFDC13Q8IUB5 93 aa5.74□□□□□ -1.49
PTPDC1-201ENST00000288976 FAM104AQ969W3 186 aa5.74□□□□□ -1.49
PTPDC1-201ENST00000288976 CDC42SE2Q9NRR3 84 aa5.74□□□□□ -1.49
PTPDC1-201ENST00000288976 IGLV4-60A0A075B6I1 120 aa5.73□□□□□ -1.49
PTPDC1-201ENST00000288976 RPL28P46779 137 aaKnown RBP5.73□□□□□ -1.49
PTPDC1-201ENST00000288976 FXYD2P54710 66 aa5.73□□□□□ -1.49
PTPDC1-201ENST00000288976 LINC00337Q8N6G1 96 aa5.73□□□□□ -1.49
PTPDC1-201ENST00000288976 TP73-AS1Q9UF72 201 aa5.73□□□□□ -1.49
PTPDC1-201ENST00000288976 ACYP1P07311 99 aa5.73□□□□□ -1.49
PTPDC1-201ENST00000288976 PPDPFLQ8WWR9 84 aa5.72□□□□□ -1.49
PTPDC1-201ENST00000288976 LINC00474Q9P2X8 69 aa5.72□□□□□ -1.49
PTPDC1-201ENST00000288976 SMR3BP02814 79 aaPredicted RBP5.72□□□□□ -1.49
PTPDC1-201ENST00000288976 CASC10Q5T4H9 136 aa5.72□□□□□ -1.49
PTPDC1-201ENST00000288976 TEX49A0A1B0GTD5 131 aa5.72□□□□□ -1.49
PTPDC1-201ENST00000288976 CSMD3Q7Z407 3707 aa5.72□□□□□ -1.49
PTPDC1-201ENST00000288976 TAX1BP3O14907 124 aa5.71□□□□□ -1.49
PTPDC1-201ENST00000288976 ZNF22P17026 224 aaPredicted RBP5.71□□□□□ -1.49
PTPDC1-201ENST00000288976 LINC01545Q5VT33 79 aa5.71□□□□□ -1.49
PTPDC1-201ENST00000288976 PRR34Q9NV39 138 aa5.71□□□□□ -1.49
PTPDC1-201ENST00000288976 E9PLD3 99 aa5.71□□□□□ -1.5
PTPDC1-201ENST00000288976 PRR3P79522 188 aaKnown RBP5.71□□□□□ -1.5
PTPDC1-201ENST00000288976 A0A0J9YXY3 114 aa5.71□□□□□ -1.5
PTPDC1-201ENST00000288976 LINC01561Q8N1V8 128 aa5.7□□□□□ -1.5
PTPDC1-201ENST00000288976 TRAV23DV6A0A075B6W5 121 aa5.7□□□□□ -1.5
PTPDC1-201ENST00000288976 C9orf118A6NHY6 69 aa5.7□□□□□ -1.5
PTPDC1-201ENST00000288976 LYSTQ99698 3801 aa5.7□□□□□ -1.5
PTPDC1-201ENST00000288976 TCL1BO95988 128 aa5.69□□□□□ -1.5
PTPDC1-201ENST00000288976 PRLHP81277 87 aa5.69□□□□□ -1.5
PTPDC1-201ENST00000288976 PRR4Q16378 134 aa5.69□□□□□ -1.5
PTPDC1-201ENST00000288976 IBA57-AS1B1ANH7 110 aa5.69□□□□□ -1.5
PTPDC1-201ENST00000288976 SPACA4Q8TDM5 124 aa5.69□□□□□ -1.5
PTPDC1-201ENST00000288976 C2orf48Q96LS8 159 aa5.69□□□□□ -1.5
PTPDC1-201ENST00000288976 IGLV5-45A0A087WSX0 123 aa5.69□□□□□ -1.5
PTPDC1-201ENST00000288976 A0A1W2PPM0 123 aa5.69□□□□□ -1.5
PTPDC1-201ENST00000288976 TMEM256-PLSCR3K7ERE1 68 aa5.69□□□□□ -1.5
PTPDC1-201ENST00000288976 SEC61GP60059 68 aa5.69□□□□□ -1.5
PTPDC1-201ENST00000288976 LINC00242Q5T6M2 205 aa5.69□□□□□ -1.5
PTPDC1-201ENST00000288976 ZNF706Q9Y5V0 76 aaPredicted RBP5.69□□□□□ -1.5
PTPDC1-201ENST00000288976 FAM30AQ9NZY2 134 aa5.69□□□□□ -1.5
PTPDC1-201ENST00000288976 K7EP34 96 aa5.68□□□□□ -1.5
PTPDC1-201ENST00000288976 JMJD7-PLA2G4BH0Y9G9 81 aa5.67□□□□□ -1.5
PTPDC1-201ENST00000288976 M0R378 163 aa5.67□□□□□ -1.5
PTPDC1-201ENST00000288976 LINC00308Q8TCZ7 52 aa5.67□□□□□ -1.5
PTPDC1-201ENST00000288976 SPANXDQ9BXN6 97 aa5.66□□□□□ -1.5
PTPDC1-201ENST00000288976 ENHOQ6UWT2 76 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms