RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 TMEM256-PLSCR3K7ERE1 68 aa7.18□□□□□ -1.26
SKA1-201ENST00000285116 LINC01006Q8NI28 216 aa7.18□□□□□ -1.26
SKA1-201ENST00000285116 ENHOQ6UWT2 76 aa7.17□□□□□ -1.26
SKA1-201ENST00000285116 FAM19A1Q7Z5A9 133 aa7.17□□□□□ -1.26
SKA1-201ENST00000285116 UBL5Q9BZL1 73 aa7.17□□□□□ -1.26
SKA1-201ENST00000285116 FAM236DA0A1B0GTK5 79 aa7.17□□□□□ -1.26
SKA1-201ENST00000285116 BCE1O60756 84 aa7.17□□□□□ -1.26
SKA1-201ENST00000285116 FAM236CP0DP71 79 aa7.17□□□□□ -1.26
SKA1-201ENST00000285116 C20orf197Q8N268 126 aa7.17□□□□□ -1.26
SKA1-201ENST00000285116 WFDC9Q8NEX5 89 aa7.17□□□□□ -1.26
SKA1-201ENST00000285116 MRAPQ8TCY5 172 aa7.17□□□□□ -1.26
SKA1-201ENST00000285116 IGKV3OR2-268A0A0C4DH90 116 aa7.17□□□□□ -1.26
SKA1-201ENST00000285116 XCL1P47992 114 aa7.17□□□□□ -1.26
SKA1-201ENST00000285116 COX17Q14061 63 aa7.17□□□□□ -1.26
SKA1-201ENST00000285116 Q8N814 137 aa7.17□□□□□ -1.26
SKA1-201ENST00000285116 RPL35AP18077 110 aaKnown RBP7.15□□□□□ -1.26
SKA1-201ENST00000285116 EPM2AB3EWF7 344 aa7.15□□□□□ -1.27
SKA1-201ENST00000285116 MUC7Q8TAX7 377 aa7.15□□□□□ -1.27
SKA1-201ENST00000285116 SERP1Q9Y6X1 66 aa7.15□□□□□ -1.27
SKA1-201ENST00000285116 TGP01266 2768 aa7.15□□□□□ -1.27
SKA1-201ENST00000285116 C6orf226Q5I0X4 101 aa7.14□□□□□ -1.27
SKA1-201ENST00000285116 WFDC10AQ9H1F0 79 aa7.14□□□□□ -1.27
SKA1-201ENST00000285116 IGHV4-28A0A0C4DH34 117 aa7.14□□□□□ -1.27
SKA1-201ENST00000285116 TRAV7A0A075B6U4 112 aa7.14□□□□□ -1.27
SKA1-201ENST00000285116 ANK2Q01484 3957 aa7.13□□□□□ -1.27
SKA1-201ENST00000285116 NANOS2P60321 138 aaKnown RBP7.13□□□□□ -1.27
SKA1-201ENST00000285116 H7BZZ5 65 aa7.12□□□□□ -1.27
SKA1-201ENST00000285116 CSMD3Q7Z407 3707 aa7.12□□□□□ -1.27
SKA1-201ENST00000285116 PRB2P02812 416 aaPredicted RBP7.12□□□□□ -1.27
SKA1-201ENST00000285116 PRO0255Q9UI72 69 aa7.12□□□□□ -1.27
SKA1-201ENST00000285116 TENM3Q9P273 2699 aa7.12□□□□□ -1.27
SKA1-201ENST00000285116 KIAA0087Q14695 138 aa7.11□□□□□ -1.27
SKA1-201ENST00000285116 TENM2Q9NT68 2774 aa7.11□□□□□ -1.27
SKA1-201ENST00000285116 GYPEP15421 78 aa7.11□□□□□ -1.27
SKA1-201ENST00000285116 CD164L2Q6UWJ8 174 aa7.11□□□□□ -1.27
SKA1-201ENST00000285116 X6R8D5 127 aa7.11□□□□□ -1.27
SKA1-201ENST00000285116 LYRM9A8MSI8 78 aa7.11□□□□□ -1.27
SKA1-201ENST00000285116 KLKP1Q107X0 134 aa7.11□□□□□ -1.27
SKA1-201ENST00000285116 C11orf68Q9H3H3 251 aaKnown RBP7.11□□□□□ -1.27
SKA1-201ENST00000285116 PRO0628Q9UI54 55 aa7.1□□□□□ -1.27
SKA1-201ENST00000285116 LOC110117498A0A087WWA1 95 aa7.09□□□□□ -1.27
SKA1-201ENST00000285116 RBM3P98179 157 aaKnown RBP7.09□□□□□ -1.27
SKA1-201ENST00000285116 Q6ZQT0 140 aa7.09□□□□□ -1.27
SKA1-201ENST00000285116 LINC00482Q8N8I6 264 aa7.09□□□□□ -1.27
SKA1-201ENST00000285116 KRTAP10-3P60369 221 aa7.08□□□□□ -1.28
SKA1-201ENST00000285116 PRR3P79522 188 aaKnown RBP7.08□□□□□ -1.28
SKA1-201ENST00000285116 LINC01547P58512 204 aaPredicted RBP7.07□□□□□ -1.28
SKA1-201ENST00000285116 SMIM26A0A096LP01 95 aa7.07□□□□□ -1.28
SKA1-201ENST00000285116 LINC00575Q6W349 94 aa7.07□□□□□ -1.28
SKA1-201ENST00000285116 H3BQ85 93 aa7.07□□□□□ -1.28
SKA1-201ENST00000285116 DEFB130BP0DP73 79 aa7.07□□□□□ -1.28
SKA1-201ENST00000285116 DEFB130AP0DP74 79 aa7.07□□□□□ -1.28
SKA1-201ENST00000285116 C6orf99Q4VX62 202 aa7.07□□□□□ -1.28
SKA1-201ENST00000285116 C6orf223Q8N319 242 aa7.07□□□□□ -1.28
SKA1-201ENST00000285116 J3QL48 77 aa7.06□□□□□ -1.28
SKA1-201ENST00000285116 DNHD1Q96M86 4753 aa7.06□□□□□ -1.28
SKA1-201ENST00000285116 LINC00336Q6ZUF6 198 aa7.06□□□□□ -1.28
SKA1-201ENST00000285116 Q6ZVQ6 151 aa7.06□□□□□ -1.28
SKA1-201ENST00000285116 PDE6GP18545 87 aa7.05□□□□□ -1.28
SKA1-201ENST00000285116 CXCL6P80162 114 aa7.05□□□□□ -1.28
SKA1-201ENST00000285116 HAMPP81172 84 aa7.05□□□□□ -1.28
SKA1-201ENST00000285116 TRAV10A0A0B4J240 114 aa7.05□□□□□ -1.28
SKA1-201ENST00000285116 NDUFC1O43677 76 aa7.05□□□□□ -1.28
SKA1-201ENST00000285116 CHCHD10Q8WYQ3 142 aaPredicted RBP7.05□□□□□ -1.28
SKA1-201ENST00000285116 LAMTOR3Q9UHA4 124 aa7.05□□□□□ -1.28
SKA1-201ENST00000285116 A0A0J9YWU9 116 aa7.04□□□□□ -1.28
SKA1-201ENST00000285116 IGHV4-30-4P0DP06 118 aa7.04□□□□□ -1.28
SKA1-201ENST00000285116 TNP2Q05952 138 aa7.04□□□□□ -1.28
SKA1-201ENST00000285116 RMI2Q96E14 147 aa7.04□□□□□ -1.28
SKA1-201ENST00000285116 SNURFQ9Y675 71 aa7.04□□□□□ -1.28
SKA1-201ENST00000285116 GVQW2A0A096LPI5 108 aaPredicted RBP7.04□□□□□ -1.28
SKA1-201ENST00000285116 F8WEM9 126 aa7.04□□□□□ -1.28
SKA1-201ENST00000285116 STAB2Q8WWQ8 2551 aa7.03□□□□□ -1.28
SKA1-201ENST00000285116 REG3AQ06141 175 aa7.03□□□□□ -1.28
SKA1-201ENST00000285116 LINC00269Q8N2A0 174 aa7.03□□□□□ -1.28
SKA1-201ENST00000285116 ATP5EP56381 51 aaPredicted RBP7.03□□□□□ -1.28
SKA1-201ENST00000285116 C9orf66Q5T8R8 295 aa7.03□□□□□ -1.28
SKA1-201ENST00000285116 M0R2N4 97 aa7.02□□□□□ -1.29
SKA1-201ENST00000285116 FP248Q71RG6 208 aaPredicted RBP7.02□□□□□ -1.29
SKA1-201ENST00000285116 IGLV6-57P01721 117 aa7.02□□□□□ -1.29
SKA1-201ENST00000285116 PRR34Q9NV39 138 aa7.01□□□□□ -1.29
SKA1-201ENST00000285116 Q8N3U1 123 aa7□□□□□ -1.29
SKA1-201ENST00000285116 LELP1Q5T871 98 aa7□□□□□ -1.29
SKA1-201ENST00000285116 TRBV7-6A0A0J9YX20 115 aa7□□□□□ -1.29
SKA1-201ENST00000285116 APOC4P55056 127 aa7□□□□□ -1.29
SKA1-201ENST00000285116 CLPSL2Q6UWE3 100 aa7□□□□□ -1.29
SKA1-201ENST00000285116 Q8NDZ9 215 aa7□□□□□ -1.29
SKA1-201ENST00000285116 TRBV7-4A0A0J9YYF1 115 aa6.99□□□□□ -1.29
SKA1-201ENST00000285116 ANGP03950 147 aaKnown RBP6.99□□□□□ -1.29
SKA1-201ENST00000285116 MIFP14174 115 aa6.99□□□□□ -1.29
SKA1-201ENST00000285116 KRTAP24-1Q3LI83 254 aa6.99□□□□□ -1.29
SKA1-201ENST00000285116 LINC00528Q8N1L1 170 aa6.99□□□□□ -1.29
SKA1-201ENST00000285116 TM2D3Q9BRN9 247 aa6.98□□□□□ -1.29
SKA1-201ENST00000285116 C9orf116Q5BN46 136 aaPredicted RBP6.98□□□□□ -1.29
SKA1-201ENST00000285116 Q6ZQY7 126 aa6.98□□□□□ -1.29
SKA1-201ENST00000285116 SPAG11BQ08648 103 aa6.97□□□□□ -1.29
SKA1-201ENST00000285116 Q8NAQ8 132 aa6.97□□□□□ -1.29
SKA1-201ENST00000285116 DAD1P61803 113 aa6.97□□□□□ -1.29
SKA1-201ENST00000285116 DEFB4AO15263 64 aa6.97□□□□□ -1.29
SKA1-201ENST00000285116 ERC2-IT1O76042 136 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms