RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 Q8NBF4 154 aa9.3□□□□□ -0.92
SMARCA5-201ENST00000283131 MDFIQ99750 246 aa9.29□□□□□ -0.92
SMARCA5-201ENST00000283131 C4orf26Q17RF5 130 aa9.28□□□□□ -0.92
SMARCA5-201ENST00000283131 KIF25-AS1Q9Y6Z4 181 aa9.28□□□□□ -0.92
SMARCA5-201ENST00000283131 BCE1O60756 84 aa9.28□□□□□ -0.92
SMARCA5-201ENST00000283131 Q6ZRP5 223 aa9.28□□□□□ -0.92
SMARCA5-201ENST00000283131 C9orf129Q5T035 196 aaKnown RBP9.28□□□□□ -0.92
SMARCA5-201ENST00000283131 ZNF295-AS1Q8N0V1 137 aa9.27□□□□□ -0.92
SMARCA5-201ENST00000283131 PIEZO1Q92508 2521 aa9.27□□□□□ -0.93
SMARCA5-201ENST00000283131 LOC101927531A0A1B0GV80 90 aa9.26□□□□□ -0.93
SMARCA5-201ENST00000283131 LINC00167Q96N53 147 aa9.26□□□□□ -0.93
SMARCA5-201ENST00000283131 FHL3Q13643 280 aa9.26□□□□□ -0.93
SMARCA5-201ENST00000283131 C11orf72Q8NBR9 251 aa9.25□□□□□ -0.93
SMARCA5-201ENST00000283131 FAM19A4Q96LR4 140 aa9.24□□□□□ -0.93
SMARCA5-201ENST00000283131 ZNF580Q9UK33 172 aa9.24□□□□□ -0.93
SMARCA5-201ENST00000283131 CHTF8P0CG12 524 aa9.23□□□□□ -0.93
SMARCA5-201ENST00000283131 ABCA12Q86UK0 2595 aa9.23□□□□□ -0.93
SMARCA5-201ENST00000283131 LINC00476Q8WZB0 136 aa9.23□□□□□ -0.93
SMARCA5-201ENST00000283131 RPS28P62857 69 aaKnown RBP9.22□□□□□ -0.93
SMARCA5-201ENST00000283131 C16orf95Q9H693 158 aa9.22□□□□□ -0.93
SMARCA5-201ENST00000283131 MIR22HGQ0VDD5 57 aa9.21□□□□□ -0.93
SMARCA5-201ENST00000283131 CYP4F30PQ9H0H9 118 aa9.21□□□□□ -0.94
SMARCA5-201ENST00000283131 PKD1L2Q7Z442 2459 aa9.21□□□□□ -0.94
SMARCA5-201ENST00000283131 Q6ZPA2 131 aa9.19□□□□□ -0.94
SMARCA5-201ENST00000283131 PHF5AQ7RTV0 110 aaKnown RBP9.19□□□□□ -0.94
SMARCA5-201ENST00000283131 RTL8CO15255 209 aa9.19□□□□□ -0.94
SMARCA5-201ENST00000283131 Q6ZSN1 163 aa9.18□□□□□ -0.94
SMARCA5-201ENST00000283131 CDIP1Q9H305 208 aa9.18□□□□□ -0.94
SMARCA5-201ENST00000283131 RPL37AP61513 92 aaKnown RBP9.17□□□□□ -0.94
SMARCA5-201ENST00000283131 Q6ZQT0 140 aa9.17□□□□□ -0.94
SMARCA5-201ENST00000283131 IGLV6-57P01721 117 aa9.16□□□□□ -0.94
SMARCA5-201ENST00000283131 COA5Q86WW8 74 aa9.16□□□□□ -0.94
SMARCA5-201ENST00000283131 RBM12B-AS1Q9P1G2 102 aa9.16□□□□□ -0.94
SMARCA5-201ENST00000283131 CSNK1G2-AS1Q8NCQ2 148 aa9.15□□□□□ -0.94
SMARCA5-201ENST00000283131 AVPP01185 164 aa9.15□□□□□ -0.95
SMARCA5-201ENST00000283131 ELOF1P60002 83 aaKnown RBP9.15□□□□□ -0.95
SMARCA5-201ENST00000283131 Q6ZRX8 168 aa9.14□□□□□ -0.95
SMARCA5-201ENST00000283131 CDC42SE1Q9NRR8 79 aa9.14□□□□□ -0.95
SMARCA5-201ENST00000283131 PIEZO2Q9H5I5 2752 aa9.14□□□□□ -0.95
SMARCA5-201ENST00000283131 MRPL34Q9BQ48 92 aaKnown RBP9.14□□□□□ -0.95
SMARCA5-201ENST00000283131 A8MWP4 228 aa9.13□□□□□ -0.95
SMARCA5-201ENST00000283131 ST20-AS1Q8NBB2 130 aa9.12□□□□□ -0.95
SMARCA5-201ENST00000283131 TM2D3Q9BRN9 247 aa9.12□□□□□ -0.95
SMARCA5-201ENST00000283131 IGLV5-37A0A075B6J1 123 aa9.11□□□□□ -0.95
SMARCA5-201ENST00000283131 ERC2-IT1O76042 136 aa9.11□□□□□ -0.95
SMARCA5-201ENST00000283131 LOC110117498A0A087WWA1 95 aa9.11□□□□□ -0.95
SMARCA5-201ENST00000283131 TRBV7-4A0A0J9YYF1 115 aa9.11□□□□□ -0.95
SMARCA5-201ENST00000283131 LINC00315P59091 139 aa9.1□□□□□ -0.95
SMARCA5-201ENST00000283131 LINC00483Q53H64 154 aa9.09□□□□□ -0.95
SMARCA5-201ENST00000283131 A8MUN3 132 aa9.09□□□□□ -0.95
SMARCA5-201ENST00000283131 USP9XQ93008 2570 aaPredicted RBP9.08□□□□□ -0.96
SMARCA5-201ENST00000283131 URB1-AS1Q96HZ7 61 aa9.08□□□□□ -0.96
SMARCA5-201ENST00000283131 IGHV3OR16-9A0A0B4J2B5 98 aa9.08□□□□□ -0.96
SMARCA5-201ENST00000283131 SETD2Q9BYW2 2564 aaPredicted RBP9.07□□□□□ -0.96
SMARCA5-201ENST00000283131 A0A0D9SG42 100 aa9.07□□□□□ -0.96
SMARCA5-201ENST00000283131 IGLV5-39A0A0G2JS06 123 aa9.07□□□□□ -0.96
SMARCA5-201ENST00000283131 PRO3102Q9H379 93 aa9.06□□□□□ -0.96
SMARCA5-201ENST00000283131 NBDYA0A0U1RRE5 68 aa9.06□□□□□ -0.96
SMARCA5-201ENST00000283131 K7EQZ3 153 aa9.06□□□□□ -0.96
SMARCA5-201ENST00000283131 H3BNG1 76 aa9.05□□□□□ -0.96
SMARCA5-201ENST00000283131 COX8CQ7Z4L0 72 aa9.04□□□□□ -0.96
SMARCA5-201ENST00000283131 NCOR2Q9Y618 2525 aa9.04□□□□□ -0.96
SMARCA5-201ENST00000283131 LINC00304Q8N9R0 145 aa9.04□□□□□ -0.96
SMARCA5-201ENST00000283131 CRIP3Q6Q6R5 217 aa9.04□□□□□ -0.96
SMARCA5-201ENST00000283131 CD164Q04900 197 aa9.04□□□□□ -0.96
SMARCA5-201ENST00000283131 KRTAP10-9P60411 292 aa9.03□□□□□ -0.96
SMARCA5-201ENST00000283131 C9orf92A6NGG3 77 aa9.03□□□□□ -0.96
SMARCA5-201ENST00000283131 COL27A1Q8IZC6 1860 aaPredicted RBP9.02□□□□□ -0.96
SMARCA5-201ENST00000283131 OBSCN-AS1Q96MR7 158 aa9.02□□□□□ -0.96
SMARCA5-201ENST00000283131 LCA10Q71F78 164 aa9.02□□□□□ -0.97
SMARCA5-201ENST00000283131 MTORP42345 2549 aa9.02□□□□□ -0.97
SMARCA5-201ENST00000283131 DSCR10P59022 87 aa9.01□□□□□ -0.97
SMARCA5-201ENST00000283131 LINC00310P59036 64 aa9.01□□□□□ -0.97
SMARCA5-201ENST00000283131 IGLV5-48A0A075B6I7 105 aa9□□□□□ -0.97
SMARCA5-201ENST00000283131 KTN1-AS1Q86SY8 53 aa8.99□□□□□ -0.97
SMARCA5-201ENST00000283131 FAM218AQ96MZ4 157 aa8.98□□□□□ -0.97
SMARCA5-201ENST00000283131 LTBP2Q14767 1821 aa8.98□□□□□ -0.97
SMARCA5-201ENST00000283131 ZNF575Q86XF7 245 aa8.98□□□□□ -0.97
SMARCA5-201ENST00000283131 COL4A3Q01955 1670 aa8.98□□□□□ -0.97
SMARCA5-201ENST00000283131 A0A096LNJ9 63 aa8.97□□□□□ -0.97
SMARCA5-201ENST00000283131 WWC2-AS2Q96NR7 200 aa8.97□□□□□ -0.97
SMARCA5-201ENST00000283131 COL4A4P53420 1690 aaPredicted RBP8.97□□□□□ -0.97
SMARCA5-201ENST00000283131 CAMK2N1Q7Z7J9 78 aa8.97□□□□□ -0.97
SMARCA5-201ENST00000283131 CDSNQ15517 529 aa8.96□□□□□ -0.97
SMARCA5-201ENST00000283131 C8orf17Q9NRJ1 99 aa8.96□□□□□ -0.97
SMARCA5-201ENST00000283131 IGF2RP11717 2491 aa8.95□□□□□ -0.98
SMARCA5-201ENST00000283131 GVQW2A0A096LPI5 108 aaPredicted RBP8.95□□□□□ -0.98
SMARCA5-201ENST00000283131 A0A1B0GVX0 72 aa8.92□□□□□ -0.98
SMARCA5-201ENST00000283131 LINC00588Q9Y4M8 146 aa8.92□□□□□ -0.98
SMARCA5-201ENST00000283131 IGLV5-45A0A087WSX0 123 aa8.91□□□□□ -0.98
SMARCA5-201ENST00000283131 PRR15Q8IV56 129 aa8.91□□□□□ -0.98
SMARCA5-201ENST00000283131 FAM104AQ969W3 186 aa8.9□□□□□ -0.98
SMARCA5-201ENST00000283131 Q1T7F1 81 aa8.9□□□□□ -0.99
SMARCA5-201ENST00000283131 A0A0A0MQY5 61 aa8.89□□□□□ -0.99
SMARCA5-201ENST00000283131 FAM168BA1KXE4 195 aa8.88□□□□□ -0.99
SMARCA5-201ENST00000283131 M0R2T5 61 aa8.88□□□□□ -0.99
SMARCA5-201ENST00000283131 CR1P17927 2039 aa8.88□□□□□ -0.99
SMARCA5-201ENST00000283131 ANKRD17O75179 2603 aaKnown RBP8.88□□□□□ -0.99
SMARCA5-201ENST00000283131 POLQO75417 2590 aa8.87□□□□□ -0.99
SMARCA5-201ENST00000283131 LINC01546A6NGU7 62 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms