RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 C1orf134Q5TEV5 83 aa8.66□□□□□ -1.02
ACER3-201ENST00000278544 LINC00337Q8N6G1 96 aa8.66□□□□□ -1.02
ACER3-201ENST00000278544 TIMM17BO60830 172 aa8.66□□□□□ -1.02
ACER3-201ENST00000278544 IGKV2-28A0A075B6P5 120 aa8.65□□□□□ -1.02
ACER3-201ENST00000278544 IGKV2D-28P01615 120 aa8.65□□□□□ -1.02
ACER3-201ENST00000278544 C3orf84H3BNL1 204 aa8.64□□□□□ -1.03
ACER3-201ENST00000278544 Q6ZRN7 208 aaPredicted RBP8.64□□□□□ -1.03
ACER3-201ENST00000278544 TNP2Q05952 138 aa8.64□□□□□ -1.03
ACER3-201ENST00000278544 FRAS1Q86XX4 4008 aa8.64□□□□□ -1.03
ACER3-201ENST00000278544 KMT2CQ8NEZ4 4911 aaKnown RBP8.63□□□□□ -1.03
ACER3-201ENST00000278544 C9orf118A6NHY6 69 aa8.63□□□□□ -1.03
ACER3-201ENST00000278544 IFITM1P13164 125 aa8.63□□□□□ -1.03
ACER3-201ENST00000278544 FAM19A5Q7Z5A7 132 aaPredicted RBP8.63□□□□□ -1.03
ACER3-201ENST00000278544 Q6ZR54 194 aa8.63□□□□□ -1.03
ACER3-201ENST00000278544 LRCOL1A6NCL2 159 aa8.62□□□□□ -1.03
ACER3-201ENST00000278544 NDUFC2-KCTD14E9PQ53 114 aa8.62□□□□□ -1.03
ACER3-201ENST00000278544 HAMPP81172 84 aa8.62□□□□□ -1.03
ACER3-201ENST00000278544 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.62□□□□□ -1.03
ACER3-201ENST00000278544 C2orf48Q96LS8 159 aa8.62□□□□□ -1.03
ACER3-201ENST00000278544 TRBV30A0A0K0K1B3 111 aa8.61□□□□□ -1.03
ACER3-201ENST00000278544 LBHQ53QV2 105 aaPredicted RBP8.61□□□□□ -1.03
ACER3-201ENST00000278544 C9orf129Q5T035 196 aaKnown RBP8.61□□□□□ -1.03
ACER3-201ENST00000278544 RPL37AP8A6NKH3 93 aa8.6□□□□□ -1.03
ACER3-201ENST00000278544 S100A7L2Q5SY68 101 aa8.6□□□□□ -1.03
ACER3-201ENST00000278544 SERTAD4-AS1Q5TG53 156 aa8.6□□□□□ -1.03
ACER3-201ENST00000278544 CLEC2BQ92478 149 aa8.6□□□□□ -1.03
ACER3-201ENST00000278544 A0A087WTM6 91 aa8.6□□□□□ -1.03
ACER3-201ENST00000278544 SPCS1Q9Y6A9 102 aa8.6□□□□□ -1.03
ACER3-201ENST00000278544 A0A096LNI7 61 aa8.6□□□□□ -1.03
ACER3-201ENST00000278544 A0A1W2PPM0 123 aa8.6□□□□□ -1.03
ACER3-201ENST00000278544 FABP2P12104 132 aa8.59□□□□□ -1.03
ACER3-201ENST00000278544 H3BMG7 143 aa8.59□□□□□ -1.03
ACER3-201ENST00000278544 TRIAP1O43715 76 aa8.59□□□□□ -1.03
ACER3-201ENST00000278544 COX17Q14061 63 aa8.59□□□□□ -1.03
ACER3-201ENST00000278544 SRRM2Q9UQ35 2752 aaKnown RBP8.59□□□□□ -1.03
ACER3-201ENST00000278544 A0A1B0GWB2 263 aa8.58□□□□□ -1.04
ACER3-201ENST00000278544 PANO1I0J062 215 aa8.58□□□□□ -1.04
ACER3-201ENST00000278544 A0A0B4J2C4 111 aa8.57□□□□□ -1.04
ACER3-201ENST00000278544 Q8N814 137 aa8.57□□□□□ -1.04
ACER3-201ENST00000278544 SMIM11BQ8TCY0 68 aa8.57□□□□□ -1.04
ACER3-201ENST00000278544 SACSQ9NZJ4 4579 aa8.56□□□□□ -1.04
ACER3-201ENST00000278544 TRBV10-3A0A0K0K1G6 114 aa8.56□□□□□ -1.04
ACER3-201ENST00000278544 RTL8CO15255 209 aa8.56□□□□□ -1.04
ACER3-201ENST00000278544 COPS9Q8WXC6 57 aa8.56□□□□□ -1.04
ACER3-201ENST00000278544 DNAH6Q9C0G6 4158 aa8.55□□□□□ -1.04
ACER3-201ENST00000278544 NKAPP1Q8N9T2 125 aa8.55□□□□□ -1.04
ACER3-201ENST00000278544 A0A1B0GV72 72 aa8.55□□□□□ -1.04
ACER3-201ENST00000278544 KRTAP10-2P60368 255 aa8.54□□□□□ -1.04
ACER3-201ENST00000278544 TCL1BO95988 128 aa8.54□□□□□ -1.04
ACER3-201ENST00000278544 LOC107984640A0A0U1RRK4 108 aa8.53□□□□□ -1.04
ACER3-201ENST00000278544 A0A1W2PNN7 141 aa8.53□□□□□ -1.04
ACER3-201ENST00000278544 TRAV13-2A0A0B4J235 113 aa8.53□□□□□ -1.04
ACER3-201ENST00000278544 C14orf177Q52M58 125 aa8.53□□□□□ -1.04
ACER3-201ENST00000278544 IGLV5-52A0A0A0MRZ9 124 aa8.52□□□□□ -1.05
ACER3-201ENST00000278544 VPREB1P12018 145 aa8.52□□□□□ -1.05
ACER3-201ENST00000278544 C6orf99Q4VX62 202 aa8.52□□□□□ -1.05
ACER3-201ENST00000278544 KRTAP7-1Q8IUC3 87 aa8.51□□□□□ -1.05
ACER3-201ENST00000278544 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.51□□□□□ -1.05
ACER3-201ENST00000278544 HECTD4Q9Y4D8 3996 aa8.51□□□□□ -1.05
ACER3-201ENST00000278544 C9orf163Q8N9P6 203 aa8.5□□□□□ -1.05
ACER3-201ENST00000278544 FAM218AQ96MZ4 157 aa8.5□□□□□ -1.05
ACER3-201ENST00000278544 C7orf33Q8WU49 177 aa8.5□□□□□ -1.05
ACER3-201ENST00000278544 C22orf24Q9Y442 160 aa8.5□□□□□ -1.05
ACER3-201ENST00000278544 CNBPP62633 177 aaKnown RBP8.49□□□□□ -1.05
ACER3-201ENST00000278544 PHF5AQ7RTV0 110 aaKnown RBP8.49□□□□□ -1.05
ACER3-201ENST00000278544 K7EP34 96 aa8.49□□□□□ -1.05
ACER3-201ENST00000278544 COX6CP09669 75 aa8.49□□□□□ -1.05
ACER3-201ENST00000278544 TMEM126AQ9H061 195 aa8.49□□□□□ -1.05
ACER3-201ENST00000278544 DNAH11Q96DT5 4516 aa8.48□□□□□ -1.05
ACER3-201ENST00000278544 UBE2V1Q13404 147 aa8.48□□□□□ -1.05
ACER3-201ENST00000278544 SDIM1Q6ZPB5 146 aa8.48□□□□□ -1.05
ACER3-201ENST00000278544 M0QXV9 152 aa8.48□□□□□ -1.05
ACER3-201ENST00000278544 A0A087WYN8 130 aa8.47□□□□□ -1.05
ACER3-201ENST00000278544 C9JAW5 83 aa8.47□□□□□ -1.05
ACER3-201ENST00000278544 GTF2H5Q6ZYL4 71 aa8.47□□□□□ -1.05
ACER3-201ENST00000278544 LINC00167Q96N53 147 aa8.47□□□□□ -1.05
ACER3-201ENST00000278544 LCE6AA0A183 80 aa8.47□□□□□ -1.05
ACER3-201ENST00000278544 PKHD1P08F94 4074 aa8.46□□□□□ -1.05
ACER3-201ENST00000278544 C16orf90A8MZG2 172 aa8.46□□□□□ -1.05
ACER3-201ENST00000278544 DNAH17Q9UFH2 4485 aa8.46□□□□□ -1.05
ACER3-201ENST00000278544 UBE2BP63146 152 aa8.46□□□□□ -1.06
ACER3-201ENST00000278544 NDUFC2O95298 119 aa8.46□□□□□ -1.06
ACER3-201ENST00000278544 ALMS1Q8TCU4 4167 aa8.45□□□□□ -1.06
ACER3-201ENST00000278544 TRAV23DV6A0A075B6W5 121 aa8.45□□□□□ -1.06
ACER3-201ENST00000278544 M0R378 163 aa8.45□□□□□ -1.06
ACER3-201ENST00000278544 FAM30AQ9NZY2 134 aa8.44□□□□□ -1.06
ACER3-201ENST00000278544 TLX1NBP0CAT3 122 aa8.44□□□□□ -1.06
ACER3-201ENST00000278544 MRPL55Q7Z7F7 128 aaKnown RBP8.44□□□□□ -1.06
ACER3-201ENST00000278544 KRTAP11-1Q8IUC1 163 aa8.44□□□□□ -1.06
ACER3-201ENST00000278544 RNF151Q2KHN1 245 aa8.43□□□□□ -1.06
ACER3-201ENST00000278544 FAT2Q9NYQ8 4349 aa8.42□□□□□ -1.06
ACER3-201ENST00000278544 ZNF73O43830 326 aaPredicted RBP8.42□□□□□ -1.06
ACER3-201ENST00000278544 F8WDY8 70 aa8.42□□□□□ -1.06
ACER3-201ENST00000278544 IGLV6-57P01721 117 aa8.42□□□□□ -1.06
ACER3-201ENST00000278544 RPL28P46779 137 aaKnown RBP8.42□□□□□ -1.06
ACER3-201ENST00000278544 ETDBQ3ZM63 59 aa8.41□□□□□ -1.06
ACER3-201ENST00000278544 ATXN8Q156A1 80 aa8.41□□□□□ -1.06
ACER3-201ENST00000278544 PRLHP81277 87 aa8.4□□□□□ -1.06
ACER3-201ENST00000278544 LYRM7Q5U5X0 104 aa8.4□□□□□ -1.06
ACER3-201ENST00000278544 DIRC1Q969H9 104 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms