RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 SCXQ7RTU7 201 aa12.69□□□□□ -0.38
SSC4D-201ENST00000275560 SNURFQ9Y675 71 aa12.69□□□□□ -0.38
SSC4D-201ENST00000275560 Q6ZQY7 126 aa12.68□□□□□ -0.38
SSC4D-201ENST00000275560 CMC4P56277 68 aaPredicted RBP12.67□□□□□ -0.38
SSC4D-201ENST00000275560 PRO0255Q9UI72 69 aa12.67□□□□□ -0.38
SSC4D-201ENST00000275560 COX17Q14061 63 aa12.66□□□□□ -0.38
SSC4D-201ENST00000275560 Q6ZVQ6 151 aa12.66□□□□□ -0.38
SSC4D-201ENST00000275560 HIVEP2P31629 2446 aa12.65□□□□□ -0.38
SSC4D-201ENST00000275560 ZNF561-AS1K7EIQ3 104 aa12.65□□□□□ -0.38
SSC4D-201ENST00000275560 X6R8D5 127 aa12.65□□□□□ -0.38
SSC4D-201ENST00000275560 ANK3Q12955 4377 aaKnown RBP12.65□□□□□ -0.38
SSC4D-201ENST00000275560 FAM236DA0A1B0GTK5 79 aa12.64□□□□□ -0.39
SSC4D-201ENST00000275560 FAM236CP0DP71 79 aa12.64□□□□□ -0.39
SSC4D-201ENST00000275560 H7BZZ5 65 aa12.64□□□□□ -0.39
SSC4D-201ENST00000275560 IGHV4-28A0A0C4DH34 117 aa12.63□□□□□ -0.39
SSC4D-201ENST00000275560 LINC00482Q8N8I6 264 aa12.63□□□□□ -0.39
SSC4D-201ENST00000275560 RMI2Q96E14 147 aa12.63□□□□□ -0.39
SSC4D-201ENST00000275560 TRBV10-3A0A0K0K1G6 114 aa12.63□□□□□ -0.39
SSC4D-201ENST00000275560 LINC00612Q8N6U2 182 aa12.63□□□□□ -0.39
SSC4D-201ENST00000275560 XAGE1AQ9HD64 81 aa12.63□□□□□ -0.39
SSC4D-201ENST00000275560 SPAG11BQ08648 103 aa12.62□□□□□ -0.39
SSC4D-201ENST00000275560 CYSRT1A8MQ03 144 aa12.61□□□□□ -0.39
SSC4D-201ENST00000275560 LOC110117498A0A087WWA1 95 aa12.61□□□□□ -0.39
SSC4D-201ENST00000275560 ITPR2Q14571 2701 aa12.59□□□□□ -0.39
SSC4D-201ENST00000275560 TRAV7A0A075B6U4 112 aa12.59□□□□□ -0.39
SSC4D-201ENST00000275560 NDUFC2-KCTD14E9PQ53 114 aa12.58□□□□□ -0.4
SSC4D-201ENST00000275560 IGLV6-57P01721 117 aa12.58□□□□□ -0.4
SSC4D-201ENST00000275560 DEFB135Q30KP9 77 aa12.57□□□□□ -0.4
SSC4D-201ENST00000275560 HTN3P15516 51 aa12.57□□□□□ -0.4
SSC4D-201ENST00000275560 MUC7Q8TAX7 377 aa12.57□□□□□ -0.4
SSC4D-201ENST00000275560 TM2D3Q9BRN9 247 aa12.57□□□□□ -0.4
SSC4D-201ENST00000275560 F8WEM9 126 aa12.55□□□□□ -0.4
SSC4D-201ENST00000275560 KLK12Q9UKR0 248 aa12.55□□□□□ -0.4
SSC4D-201ENST00000275560 Q8N9L7 120 aa12.53□□□□□ -0.4
SSC4D-201ENST00000275560 CELA1Q9UNI1 258 aa12.53□□□□□ -0.4
SSC4D-201ENST00000275560 TENM4Q6N022 2769 aa12.53□□□□□ -0.4
SSC4D-201ENST00000275560 TENM1Q9UKZ4 2725 aa12.52□□□□□ -0.4
SSC4D-201ENST00000275560 HIVEP1P15822 2718 aa12.52□□□□□ -0.41
SSC4D-201ENST00000275560 PKD1L1Q8TDX9 2849 aa12.51□□□□□ -0.41
SSC4D-201ENST00000275560 KRTAP10-3P60369 221 aa12.51□□□□□ -0.41
SSC4D-201ENST00000275560 C6orf48Q9UBA6 75 aa12.51□□□□□ -0.41
SSC4D-201ENST00000275560 UNC79Q9P2D8 2635 aa12.51□□□□□ -0.41
SSC4D-201ENST00000275560 TRRAPQ9Y4A5 3859 aa12.51□□□□□ -0.41
SSC4D-201ENST00000275560 PDZD2O15018 2839 aa12.51□□□□□ -0.41
SSC4D-201ENST00000275560 KLKP1Q107X0 134 aa12.51□□□□□ -0.41
SSC4D-201ENST00000275560 DIRC1Q969H9 104 aa12.51□□□□□ -0.41
SSC4D-201ENST00000275560 WIPF1O43516 503 aa12.5□□□□□ -0.41
SSC4D-201ENST00000275560 SERP1Q9Y6X1 66 aa12.5□□□□□ -0.41
SSC4D-201ENST00000275560 DAD1P61803 113 aa12.49□□□□□ -0.41
SSC4D-201ENST00000275560 A0A0J9YWU9 116 aa12.49□□□□□ -0.41
SSC4D-201ENST00000275560 IGHV4-30-4P0DP06 118 aa12.49□□□□□ -0.41
SSC4D-201ENST00000275560 C9orf66Q5T8R8 295 aa12.49□□□□□ -0.41
SSC4D-201ENST00000275560 C16orf95Q9H693 158 aa12.49□□□□□ -0.41
SSC4D-201ENST00000275560 ZNF73O43830 326 aaPredicted RBP12.48□□□□□ -0.41
SSC4D-201ENST00000275560 HIGD2BQ4VC39 106 aa12.48□□□□□ -0.41
SSC4D-201ENST00000275560 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.48□□□□□ -0.41
SSC4D-201ENST00000275560 CXCL6P80162 114 aa12.47□□□□□ -0.41
SSC4D-201ENST00000275560 TRBV7-4A0A0J9YYF1 115 aa12.47□□□□□ -0.41
SSC4D-201ENST00000275560 KRTAP1-1Q07627 177 aa12.47□□□□□ -0.41
SSC4D-201ENST00000275560 EPM2AB3EWF7 344 aa12.46□□□□□ -0.41
SSC4D-201ENST00000275560 COX7BP24311 80 aa12.46□□□□□ -0.41
SSC4D-201ENST00000275560 LINC00336Q6ZUF6 198 aa12.46□□□□□ -0.42
SSC4D-201ENST00000275560 LINC00474Q9P2X8 69 aa12.46□□□□□ -0.42
SSC4D-201ENST00000275560 LYRM9A8MSI8 78 aa12.45□□□□□ -0.42
SSC4D-201ENST00000275560 FP248Q71RG6 208 aaPredicted RBP12.45□□□□□ -0.42
SSC4D-201ENST00000275560 BCE1O60756 84 aa12.42□□□□□ -0.42
SSC4D-201ENST00000275560 PDE6GP18545 87 aa12.42□□□□□ -0.42
SSC4D-201ENST00000275560 ELOF1P60002 83 aaKnown RBP12.42□□□□□ -0.42
SSC4D-201ENST00000275560 NREPQ16612 68 aa12.42□□□□□ -0.42
SSC4D-201ENST00000275560 BPY2O14599 106 aa12.41□□□□□ -0.42
SSC4D-201ENST00000275560 LELP1Q5T871 98 aa12.4□□□□□ -0.42
SSC4D-201ENST00000275560 PRR34Q9NV39 138 aa12.4□□□□□ -0.42
SSC4D-201ENST00000275560 MIFP14174 115 aa12.39□□□□□ -0.43
SSC4D-201ENST00000275560 SMR3AQ99954 134 aa12.39□□□□□ -0.43
SSC4D-201ENST00000275560 C3orf84H3BNL1 204 aa12.38□□□□□ -0.43
SSC4D-201ENST00000275560 TRBV7-6A0A0J9YX20 115 aa12.38□□□□□ -0.43
SSC4D-201ENST00000275560 VPREB1P12018 145 aa12.38□□□□□ -0.43
SSC4D-201ENST00000275560 TEP1Q99973 2627 aaKnown RBP12.37□□□□□ -0.43
SSC4D-201ENST00000275560 CAMK2N2Q96S95 79 aa12.37□□□□□ -0.43
SSC4D-201ENST00000275560 TMEM254Q8TBM7 123 aa12.36□□□□□ -0.43
SSC4D-201ENST00000275560 GVQW2A0A096LPI5 108 aaPredicted RBP12.36□□□□□ -0.43
SSC4D-201ENST00000275560 Q8NAQ8 132 aa12.36□□□□□ -0.43
SSC4D-201ENST00000275560 DEFB105AQ8NG35 78 aa12.35□□□□□ -0.43
SSC4D-201ENST00000275560 ATRQ13535 2644 aa12.35□□□□□ -0.43
SSC4D-201ENST00000275560 Q6ZRU5 148 aa12.35□□□□□ -0.43
SSC4D-201ENST00000275560 FAM229BQ4G0N7 80 aa12.34□□□□□ -0.43
SSC4D-201ENST00000275560 FASNP49327 2511 aaKnown RBP12.34□□□□□ -0.43
SSC4D-201ENST00000275560 IGKV4-1P06312 121 aa12.33□□□□□ -0.43
SSC4D-201ENST00000275560 WFDC10BQ8IUB3 73 aa12.33□□□□□ -0.43
SSC4D-201ENST00000275560 SMIM26A0A096LP01 95 aa12.33□□□□□ -0.44
SSC4D-201ENST00000275560 LINC00528Q8N1L1 170 aa12.33□□□□□ -0.44
SSC4D-201ENST00000275560 NOTCH2Q04721 2471 aa12.32□□□□□ -0.44
SSC4D-201ENST00000275560 H3BQ85 93 aa12.3□□□□□ -0.44
SSC4D-201ENST00000275560 SPART-AS1P0CW21 52 aa12.29□□□□□ -0.44
SSC4D-201ENST00000275560 HELZ2Q9BYK8 2649 aaKnown RBP12.29□□□□□ -0.44
SSC4D-201ENST00000275560 M0R378 163 aa12.29□□□□□ -0.44
SSC4D-201ENST00000275560 MPLKIPQ8TAP9 179 aa12.29□□□□□ -0.44
SSC4D-201ENST00000275560 Q6ZRP5 223 aa12.28□□□□□ -0.44
SSC4D-201ENST00000275560 HIGD2AQ9BW72 106 aa12.28□□□□□ -0.44
SSC4D-201ENST00000275560 APOC4P55056 127 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms